RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-238ENST00000556288 AARDQ4LEZ3 155 aa3.46□□□□□ -1.86
ATXN3-238ENST00000556288 PQLC2Q6ZP29 291 aa3.46□□□□□ -1.86
ATXN3-238ENST00000556288 OR8I2Q8N0Y5 310 aa3.46□□□□□ -1.86
ATXN3-238ENST00000556288 BPIFCQ8NFQ6 507 aa3.46□□□□□ -1.86
ATXN3-238ENST00000556288 LRRC20Q8TCA0 184 aa3.46□□□□□ -1.86
ATXN3-238ENST00000556288 KRTAP1-5Q9BYS1 174 aa3.46□□□□□ -1.86
ATXN3-238ENST00000556288 MED28Q9H204 178 aa3.46□□□□□ -1.86
ATXN3-238ENST00000556288 MS4A6AQ9H2W1 248 aa3.46□□□□□ -1.86
ATXN3-238ENST00000556288 NPVFQ9HCQ7 196 aa3.46□□□□□ -1.86
ATXN3-238ENST00000556288 U3KQK5 164 aa3.46□□□□□ -1.86
ATXN3-238ENST00000556288 CMYA5Q8N3K9 4069 aa3.45□□□□□ -1.86
ATXN3-238ENST00000556288 LOC102724200A0A096LPH7 203 aaPredicted RBP3.45□□□□□ -1.86
ATXN3-238ENST00000556288 RBMY1BA6NDE4 496 aaKnown RBP3.45□□□□□ -1.86
ATXN3-238ENST00000556288 RBMY1EA6NEQ0 496 aaKnown RBP3.45□□□□□ -1.86
ATXN3-238ENST00000556288 HELTA6NFD8 242 aa3.45□□□□□ -1.86
ATXN3-238ENST00000556288 VCYO14598 125 aa3.45□□□□□ -1.86
ATXN3-238ENST00000556288 TSC22D2O75157 780 aa3.45□□□□□ -1.86
ATXN3-238ENST00000556288 IGKV3-20P01619 116 aa3.45□□□□□ -1.86
ATXN3-238ENST00000556288 CD5P06127 495 aa3.45□□□□□ -1.86
ATXN3-238ENST00000556288 SNRPCP09234 159 aaKnown RBP3.45□□□□□ -1.86
ATXN3-238ENST00000556288 RBMY1DP0C7P1 496 aaKnown RBP3.45□□□□□ -1.86
ATXN3-238ENST00000556288 ZNF688P0C7X2 276 aa3.45□□□□□ -1.86
ATXN3-238ENST00000556288 CRYBB3P26998 211 aa3.45□□□□□ -1.86
ATXN3-238ENST00000556288 S100A7P31151 101 aa3.45□□□□□ -1.86
ATXN3-238ENST00000556288 NUP62P37198 522 aaPredicted RBP3.45□□□□□ -1.86
ATXN3-238ENST00000556288 AP2S1P53680 142 aaPredicted RBP3.45□□□□□ -1.86
ATXN3-238ENST00000556288 DEFB131AP59861 70 aa3.45□□□□□ -1.86
ATXN3-238ENST00000556288 SEC61BP60468 96 aaKnown RBP3.45□□□□□ -1.86
ATXN3-238ENST00000556288 RPL36AP83881 106 aaKnown RBP3.45□□□□□ -1.86
ATXN3-238ENST00000556288 BAXQ07812 192 aa3.45□□□□□ -1.86
ATXN3-238ENST00000556288 CD300CQ08708 224 aa3.45□□□□□ -1.86
ATXN3-238ENST00000556288 SLC38A11Q08AI6 406 aa3.45□□□□□ -1.86
ATXN3-238ENST00000556288 RAB31Q13636 194 aa3.45□□□□□ -1.86
ATXN3-238ENST00000556288 USF2Q15853 346 aaPredicted RBP3.45□□□□□ -1.86
ATXN3-238ENST00000556288 HAGHQ16775 308 aa3.45□□□□□ -1.86
ATXN3-238ENST00000556288 LEMD1Q68G75 181 aa3.45□□□□□ -1.86
ATXN3-238ENST00000556288 PVRIGQ6DKI7 326 aa3.45□□□□□ -1.86
ATXN3-238ENST00000556288 FAM122CQ6P4D5 195 aa3.45□□□□□ -1.86
ATXN3-238ENST00000556288 SIGLEC15Q6ZMC9 328 aa3.45□□□□□ -1.86
ATXN3-238ENST00000556288 CYP2G1PQ6ZSU1 146 aa3.45□□□□□ -1.86
ATXN3-238ENST00000556288 ACOT7LQ6ZUV0 252 aa3.45□□□□□ -1.86
ATXN3-238ENST00000556288 STX12Q86Y82 276 aa3.45□□□□□ -1.86
ATXN3-238ENST00000556288 TRGV9Q99603 122 aa3.45□□□□□ -1.86
ATXN3-238ENST00000556288 SPAG8Q99932 426 aaPredicted RBP3.45□□□□□ -1.86
ATXN3-238ENST00000556288 RSG1Q9BU20 258 aa3.45□□□□□ -1.86
ATXN3-238ENST00000556288 TMEM147Q9BVK8 224 aa3.45□□□□□ -1.86
ATXN3-238ENST00000556288 SLC25A31Q9H0C2 315 aa3.45□□□□□ -1.86
ATXN3-238ENST00000556288 ARL6Q9H0F7 186 aa3.45□□□□□ -1.86
ATXN3-238ENST00000556288 RETNQ9HD89 108 aa3.45□□□□□ -1.86
ATXN3-238ENST00000556288 ALG5Q9Y673 324 aa3.45□□□□□ -1.86
ATXN3-238ENST00000556288 ANK2Q01484 3957 aa3.44□□□□□ -1.86
ATXN3-238ENST00000556288 IGKV1D-37A0A075B6S9 117 aa3.44□□□□□ -1.86
ATXN3-238ENST00000556288 A0A1B0GUV1 79 aa3.44□□□□□ -1.86
ATXN3-238ENST00000556288 KNCNA6PVL3 124 aa3.44□□□□□ -1.86
ATXN3-238ENST00000556288 E5RGE8 158 aa3.44□□□□□ -1.86
ATXN3-238ENST00000556288 AGPAT2O15120 278 aa3.44□□□□□ -1.86
ATXN3-238ENST00000556288 COX7A2P2O60397 106 aa3.44□□□□□ -1.86
ATXN3-238ENST00000556288 PAGE4O60829 102 aa3.44□□□□□ -1.86
ATXN3-238ENST00000556288 HYPMO75409 117 aa3.44□□□□□ -1.86
ATXN3-238ENST00000556288 DEDDO75618 318 aa3.44□□□□□ -1.86
ATXN3-238ENST00000556288 CFDP00746 253 aaPredicted RBP3.44□□□□□ -1.86
ATXN3-238ENST00000556288 PRB4P10163 310 aaPredicted RBP3.44□□□□□ -1.86
ATXN3-238ENST00000556288 FGF7P21781 194 aa3.44□□□□□ -1.86
ATXN3-238ENST00000556288 S100A11P31949 105 aa3.44□□□□□ -1.86
ATXN3-238ENST00000556288 ID1P41134 155 aa3.44□□□□□ -1.86
ATXN3-238ENST00000556288 TAS2R30P59541 319 aa3.44□□□□□ -1.86
ATXN3-238ENST00000556288 ERVFC1-1P60608 527 aa3.44□□□□□ -1.86
ATXN3-238ENST00000556288 HBG1P69891 147 aa3.44□□□□□ -1.86
ATXN3-238ENST00000556288 HBG2P69892 147 aa3.44□□□□□ -1.86
ATXN3-238ENST00000556288 DLK1P80370 383 aa3.44□□□□□ -1.86
ATXN3-238ENST00000556288 ARL16Q0P5N6 197 aa3.44□□□□□ -1.86
ATXN3-238ENST00000556288 CLINT1Q14677 625 aa3.44□□□□□ -1.86
ATXN3-238ENST00000556288 PSMG4Q5JS54 123 aa3.44□□□□□ -1.86
ATXN3-238ENST00000556288 ACTL10Q5JWF8 245 aa3.44□□□□□ -1.86
ATXN3-238ENST00000556288 C16orf54Q6UWD8 224 aa3.44□□□□□ -1.86
ATXN3-238ENST00000556288 TMEM14EPQ6UXP3 125 aa3.44□□□□□ -1.86
ATXN3-238ENST00000556288 TMEM182Q6ZP80 229 aaPredicted RBP3.44□□□□□ -1.86
ATXN3-238ENST00000556288 Q6ZRG5 221 aa3.44□□□□□ -1.86
ATXN3-238ENST00000556288 TMEM144Q7Z5S9 345 aa3.44□□□□□ -1.86
ATXN3-238ENST00000556288 STHQ8IWL8 128 aa3.44□□□□□ -1.86
ATXN3-238ENST00000556288 SLC7A5P1Q8MH63 180 aa3.44□□□□□ -1.86
ATXN3-238ENST00000556288 ZNF709Q8N972 641 aa3.44□□□□□ -1.86
ATXN3-238ENST00000556288 THAP6Q8TBB0 222 aa3.44□□□□□ -1.86
ATXN3-238ENST00000556288 SCGB1C1Q8TD33 95 aa3.44□□□□□ -1.86
ATXN3-238ENST00000556288 ASB13Q8WXK3 278 aa3.44□□□□□ -1.86
ATXN3-238ENST00000556288 RCHY1Q96PM5 261 aa3.44□□□□□ -1.86
ATXN3-238ENST00000556288 GGTLC1Q9BX51 225 aa3.44□□□□□ -1.86
ATXN3-238ENST00000556288 SMIM3Q9BZL3 60 aa3.44□□□□□ -1.86
ATXN3-238ENST00000556288 NMES1Q9C002 83 aa3.44□□□□□ -1.86
ATXN3-238ENST00000556288 VSIRQ9H7M9 311 aa3.44□□□□□ -1.86
ATXN3-238ENST00000556288 OR5AC2Q9NZP5 309 aa3.44□□□□□ -1.86
ATXN3-238ENST00000556288 FBXL17Q9UF56 701 aa3.44□□□□□ -1.86
ATXN3-238ENST00000556288 HIGD1AQ9Y241 93 aa3.44□□□□□ -1.86
ATXN3-238ENST00000556288 MEGF8Q7Z7M0 2845 aa3.44□□□□□ -1.86
ATXN3-238ENST00000556288 IGKV1OR2-108A0A075B7D4 117 aa3.43□□□□□ -1.86
ATXN3-238ENST00000556288 UBE2L5PA0A1B0GUS4 154 aa3.43□□□□□ -1.86
ATXN3-238ENST00000556288 IGSF23A1L1A6 192 aa3.43□□□□□ -1.86
ATXN3-238ENST00000556288 LINC00862A6NCI5 91 aa3.43□□□□□ -1.86
ATXN3-238ENST00000556288 ZNF98A6NK75 572 aa3.43□□□□□ -1.86
ATXN3-238ENST00000556288 PMS2P5A8MQ11 134 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms