RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 OR5AS1Q8N127 324 aa-0.04□□□□□ -2.42
SRP54-207ENST00000555535 OR5D16Q8NGK9 328 aa-0.04□□□□□ -2.42
SRP54-207ENST00000555535 ZHX1-C8orf76Q96EF9 292 aa-0.04□□□□□ -2.42
SRP54-207ENST00000555535 CCL19Q99731 98 aa-0.04□□□□□ -2.42
SRP54-207ENST00000555535 TCEAL2Q9H3H9 227 aaPredicted RBP-0.04□□□□□ -2.42
SRP54-207ENST00000555535 BOKQ9UMX3 212 aaPredicted RBP-0.04□□□□□ -2.42
SRP54-207ENST00000555535 ASH1LQ9NR48 2969 aaKnown RBP-0.04□□□□□ -2.42
SRP54-207ENST00000555535 SIPA1L2Q9P2F8 1722 aaPredicted RBP-0.04□□□□□ -2.42
SRP54-207ENST00000555535 FMN1Q68DA7 1419 aa-0.04□□□□□ -2.42
SRP54-207ENST00000555535 AHCTF1Q8WYP5 2266 aa-0.04□□□□□ -2.42
SRP54-207ENST00000555535 ADCY9O60503 1353 aa-0.05□□□□□ -2.42
SRP54-207ENST00000555535 NUP210Q8TEM1 1887 aaPredicted RBP-0.05□□□□□ -2.42
SRP54-207ENST00000555535 ESPL1Q14674 2120 aa-0.05□□□□□ -2.42
SRP54-207ENST00000555535 KIAA1549LQ6ZVL6 1849 aa-0.05□□□□□ -2.42
SRP54-207ENST00000555535 DUXBA0A1W2PPF3 345 aa-0.05□□□□□ -2.42
SRP54-207ENST00000555535 ODAMA1E959 279 aa-0.05□□□□□ -2.42
SRP54-207ENST00000555535 IGLV1-51P01701 117 aa-0.05□□□□□ -2.42
SRP54-207ENST00000555535 OR10J4P0C629 311 aa-0.05□□□□□ -2.42
SRP54-207ENST00000555535 NFYBP25208 207 aa-0.05□□□□□ -2.42
SRP54-207ENST00000555535 RAB5CP51148 216 aa-0.05□□□□□ -2.42
SRP54-207ENST00000555535 TMBIM6P55061 237 aa-0.05□□□□□ -2.42
SRP54-207ENST00000555535 ARPP19P56211 112 aa-0.05□□□□□ -2.42
SRP54-207ENST00000555535 TMEM97Q5BJF2 176 aa-0.05□□□□□ -2.42
SRP54-207ENST00000555535 PTRHD1Q6GMV3 140 aaKnown RBP-0.05□□□□□ -2.42
SRP54-207ENST00000555535 ARPINQ7Z6K5 226 aa-0.05□□□□□ -2.42
SRP54-207ENST00000555535 LRRC18Q8N456 261 aa-0.05□□□□□ -2.42
SRP54-207ENST00000555535 OTUD6BQ8N6M0 293 aa-0.05□□□□□ -2.42
SRP54-207ENST00000555535 GNPDA2Q8TDQ7 276 aa-0.05□□□□□ -2.42
SRP54-207ENST00000555535 ARL5BQ96KC2 179 aa-0.05□□□□□ -2.42
SRP54-207ENST00000555535 RNF11Q9Y3C5 154 aa-0.05□□□□□ -2.42
SRP54-207ENST00000555535 ABCA1O95477 2261 aa-0.05□□□□□ -2.42
SRP54-207ENST00000555535 NCOR2Q9Y618 2525 aa-0.05□□□□□ -2.42
SRP54-207ENST00000555535 LRP1Q07954 4544 aaKnown RBP-0.05□□□□□ -2.42
SRP54-207ENST00000555535 MIA2Q96PC5 1412 aa-0.05□□□□□ -2.42
SRP54-207ENST00000555535 ANKRD17O75179 2603 aaKnown RBP-0.06□□□□□ -2.42
SRP54-207ENST00000555535 A0A1W2PRS3 328 aa-0.06□□□□□ -2.42
SRP54-207ENST00000555535 hDV103S1A0JD37 113 aa-0.06□□□□□ -2.42
SRP54-207ENST00000555535 FAM159BA6NKW6 160 aa-0.06□□□□□ -2.42
SRP54-207ENST00000555535 TMEM114B3SHH9 223 aa-0.06□□□□□ -2.42
SRP54-207ENST00000555535 IFNA7P01567 189 aa-0.06□□□□□ -2.42
SRP54-207ENST00000555535 CRHP06850 196 aa-0.06□□□□□ -2.42
SRP54-207ENST00000555535 CCL4P13236 92 aa-0.06□□□□□ -2.42
SRP54-207ENST00000555535 HLA-EP13747 358 aa-0.06□□□□□ -2.42
SRP54-207ENST00000555535 HIST1H3AP68431 136 aa-0.06□□□□□ -2.42
SRP54-207ENST00000555535 KLRD1Q13241 179 aa-0.06□□□□□ -2.42
SRP54-207ENST00000555535 SPA17Q15506 151 aa-0.06□□□□□ -2.42
SRP54-207ENST00000555535 MSMO1Q15800 293 aa-0.06□□□□□ -2.42
SRP54-207ENST00000555535 NEDD8Q15843 81 aa-0.06□□□□□ -2.42
SRP54-207ENST00000555535 SNCBQ16143 134 aa-0.06□□□□□ -2.42
SRP54-207ENST00000555535 VMA21Q3ZAQ7 101 aa-0.06□□□□□ -2.42
SRP54-207ENST00000555535 LIN52Q52LA3 116 aa-0.06□□□□□ -2.42
SRP54-207ENST00000555535 ATOH7Q8N100 152 aa-0.06□□□□□ -2.42
SRP54-207ENST00000555535 OR8J2Q8NGG1 315 aa-0.06□□□□□ -2.42
SRP54-207ENST00000555535 DGCR14Q96DF8 476 aaKnown RBP-0.06□□□□□ -2.42
SRP54-207ENST00000555535 MALSU1Q96EH3 234 aa-0.06□□□□□ -2.42
SRP54-207ENST00000555535 BTF3L4Q96K17 158 aa-0.06□□□□□ -2.42
SRP54-207ENST00000555535 HYLS1Q96M11 299 aa-0.06□□□□□ -2.42
SRP54-207ENST00000555535 C9orf16Q9BUW7 83 aa-0.06□□□□□ -2.42
SRP54-207ENST00000555535 DMBT1Q9UGM3 2413 aaPredicted RBP-0.07□□□□□ -2.42
SRP54-207ENST00000555535 CTTNBP2Q8WZ74 1663 aa-0.07□□□□□ -2.42
SRP54-207ENST00000555535 TRBV19A0A075B6N1 114 aa-0.07□□□□□ -2.42
SRP54-207ENST00000555535 PRORSD1PA6NEY8 169 aa-0.07□□□□□ -2.42
SRP54-207ENST00000555535 RER1O15258 196 aa-0.07□□□□□ -2.42
SRP54-207ENST00000555535 GGCTO75223 188 aaKnown RBP-0.07□□□□□ -2.42
SRP54-207ENST00000555535 OR7C1O76099 320 aaPredicted RBP-0.07□□□□□ -2.42
SRP54-207ENST00000555535 SERPINA1P01009 418 aa-0.07□□□□□ -2.42
SRP54-207ENST00000555535 INSL3P51460 131 aa-0.07□□□□□ -2.42
SRP54-207ENST00000555535 VBP1P61758 197 aa-0.07□□□□□ -2.42
SRP54-207ENST00000555535 PATE2Q6UY27 113 aa-0.07□□□□□ -2.42
SRP54-207ENST00000555535 GOLT1AQ6ZVE7 132 aa-0.07□□□□□ -2.42
SRP54-207ENST00000555535 OR10X1Q8NGY0 326 aa-0.07□□□□□ -2.42
SRP54-207ENST00000555535 OR10AG1Q8NH19 301 aa-0.07□□□□□ -2.42
SRP54-207ENST00000555535 PPTC7Q8NI37 304 aa-0.07□□□□□ -2.42
SRP54-207ENST00000555535 LYSMD1Q96S90 227 aa-0.07□□□□□ -2.42
SRP54-207ENST00000555535 PHB2Q99623 299 aa-0.07□□□□□ -2.42
SRP54-207ENST00000555535 CCDC94Q9BW85 323 aaPredicted RBP-0.07□□□□□ -2.42
SRP54-207ENST00000555535 IMUPQ9GZP8 106 aa-0.07□□□□□ -2.42
SRP54-207ENST00000555535 POPDC3Q9HBV1 291 aa-0.07□□□□□ -2.42
SRP54-207ENST00000555535 ADGRL3Q9HAR2 1447 aa-0.07□□□□□ -2.42
SRP54-207ENST00000555535 CACNA1HO95180 2353 aa-0.08□□□□□ -2.42
SRP54-207ENST00000555535 ZFYVE26Q68DK2 2539 aa-0.08□□□□□ -2.42
SRP54-207ENST00000555535 HRNRQ86YZ3 2850 aaPredicted RBP-0.08□□□□□ -2.42
SRP54-207ENST00000555535 TRAV27A0A087WT01 109 aa-0.08□□□□□ -2.42
SRP54-207ENST00000555535 FXYD1O00168 92 aa-0.08□□□□□ -2.42
SRP54-207ENST00000555535 NIPSNAP2O75323 286 aa-0.08□□□□□ -2.42
SRP54-207ENST00000555535 MT-ND6P03923 174 aa-0.08□□□□□ -2.42
SRP54-207ENST00000555535 IDO1P14902 403 aa-0.08□□□□□ -2.42
SRP54-207ENST00000555535 CDKN2CP42773 168 aa-0.08□□□□□ -2.42
SRP54-207ENST00000555535 MYL6P60660 151 aa-0.08□□□□□ -2.42
SRP54-207ENST00000555535 NCALDP61601 193 aa-0.08□□□□□ -2.42
SRP54-207ENST00000555535 MIR22HGQ0VDD5 57 aa-0.08□□□□□ -2.42
SRP54-207ENST00000555535 DIAPH2-AS1Q14236 149 aa-0.08□□□□□ -2.42
SRP54-207ENST00000555535 LYG2Q86SG7 212 aa-0.08□□□□□ -2.42
SRP54-207ENST00000555535 PRR15Q8IV56 129 aa-0.08□□□□□ -2.42
SRP54-207ENST00000555535 RMND5BQ96G75 393 aaPredicted RBP-0.08□□□□□ -2.42
SRP54-207ENST00000555535 MAP1LC3BQ9GZQ8 125 aa-0.08□□□□□ -2.42
SRP54-207ENST00000555535 RNF122Q9H9V4 155 aa-0.08□□□□□ -2.42
SRP54-207ENST00000555535 NMNAT1Q9HAN9 279 aaPredicted RBP-0.08□□□□□ -2.42
SRP54-207ENST00000555535 CACYBPQ9HB71 228 aaKnown RBP-0.08□□□□□ -2.42
SRP54-207ENST00000555535 HSPB8Q9UJY1 196 aa-0.08□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms