RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 HELTA6NFD8 242 aa8.22□□□□□ -1.09
SHMT2-218ENST00000555213 H3BRN7 92 aa8.22□□□□□ -1.09
SHMT2-218ENST00000555213 SRP19P09132 144 aaKnown RBP8.22□□□□□ -1.09
SHMT2-218ENST00000555213 RPL11P62913 178 aaKnown RBP8.22□□□□□ -1.09
SHMT2-218ENST00000555213 PAFAH1B2P68402 229 aa8.22□□□□□ -1.09
SHMT2-218ENST00000555213 DEFA6Q01524 100 aa8.22□□□□□ -1.09
SHMT2-218ENST00000555213 LEMD1Q68G75 181 aa8.22□□□□□ -1.09
SHMT2-218ENST00000555213 FXYD5Q96DB9 178 aa8.22□□□□□ -1.09
SHMT2-218ENST00000555213 LINC00052Q96N35 136 aa8.22□□□□□ -1.09
SHMT2-218ENST00000555213 SPAG8Q99932 426 aaPredicted RBP8.22□□□□□ -1.09
SHMT2-218ENST00000555213 AURKAIP1Q9NWT8 199 aaPredicted RBP8.22□□□□□ -1.09
SHMT2-218ENST00000555213 RNF24Q9Y225 148 aa8.22□□□□□ -1.09
SHMT2-218ENST00000555213 HIGD1AQ9Y241 93 aa8.22□□□□□ -1.09
SHMT2-218ENST00000555213 IGHV3-66A0A0C4DH42 116 aa8.21□□□□□ -1.1
SHMT2-218ENST00000555213 OR4C46A6NHA9 309 aa8.21□□□□□ -1.1
SHMT2-218ENST00000555213 ZNF98A6NK75 572 aa8.21□□□□□ -1.1
SHMT2-218ENST00000555213 TSPAN4O14817 238 aa8.21□□□□□ -1.1
SHMT2-218ENST00000555213 PAGE4O60829 102 aa8.21□□□□□ -1.1
SHMT2-218ENST00000555213 APOHP02749 345 aaPredicted RBP8.21□□□□□ -1.1
SHMT2-218ENST00000555213 PYYP10082 97 aa8.21□□□□□ -1.1
SHMT2-218ENST00000555213 ADCYAP1P18509 176 aa8.21□□□□□ -1.1
SHMT2-218ENST00000555213 PSMB3P49720 205 aa8.21□□□□□ -1.1
SHMT2-218ENST00000555213 CD81P60033 236 aa8.21□□□□□ -1.1
SHMT2-218ENST00000555213 KHDC3LQ587J8 217 aa8.21□□□□□ -1.1
SHMT2-218ENST00000555213 C10orf91Q5T1B1 145 aa8.21□□□□□ -1.1
SHMT2-218ENST00000555213 TCF24Q7RTU0 167 aa8.21□□□□□ -1.1
SHMT2-218ENST00000555213 PRR25Q96S07 402 aa8.21□□□□□ -1.1
SHMT2-218ENST00000555213 OR51M1Q9H341 326 aa8.21□□□□□ -1.1
SHMT2-218ENST00000555213 GNG13Q9P2W3 67 aa8.21□□□□□ -1.1
SHMT2-218ENST00000555213 YTHDF2Q9Y5A9 579 aaKnown RBP8.21□□□□□ -1.1
SHMT2-218ENST00000555213 SMAD5-AS1Q9Y6J3 95 aa8.21□□□□□ -1.1
SHMT2-218ENST00000555213 FAM74A7A6NL05 159 aa8.2□□□□□ -1.1
SHMT2-218ENST00000555213 H3BQ15 152 aa8.2□□□□□ -1.1
SHMT2-218ENST00000555213 PRB2P02812 416 aaPredicted RBP8.2□□□□□ -1.1
SHMT2-218ENST00000555213 BCL2P10415 239 aa8.2□□□□□ -1.1
SHMT2-218ENST00000555213 PEA15Q15121 130 aa8.2□□□□□ -1.1
SHMT2-218ENST00000555213 C1orf194Q5T5A4 169 aa8.2□□□□□ -1.1
SHMT2-218ENST00000555213 PQLC2Q6ZP29 291 aa8.2□□□□□ -1.1
SHMT2-218ENST00000555213 CCDC28AQ8IWP9 274 aa8.2□□□□□ -1.1
SHMT2-218ENST00000555213 RXFP4Q8TDU9 374 aa8.2□□□□□ -1.1
SHMT2-218ENST00000555213 EIF5A2Q9GZV4 153 aaKnown RBP8.2□□□□□ -1.1
SHMT2-218ENST00000555213 SMDT1Q9H4I9 107 aa8.2□□□□□ -1.1
SHMT2-218ENST00000555213 ZNF586Q9NXT0 402 aa8.2□□□□□ -1.1
SHMT2-218ENST00000555213 TMEM14CQ9P0S9 112 aa8.2□□□□□ -1.1
SHMT2-218ENST00000555213 SELENOKQ9Y6D0 94 aa8.2□□□□□ -1.1
SHMT2-218ENST00000555213 IZUMO1RA6ND01 250 aa8.19□□□□□ -1.1
SHMT2-218ENST00000555213 DNASE2O00115 360 aaPredicted RBP8.19□□□□□ -1.1
SHMT2-218ENST00000555213 BUB3O43684 328 aa8.19□□□□□ -1.1
SHMT2-218ENST00000555213 SNRPCP09234 159 aaKnown RBP8.19□□□□□ -1.1
SHMT2-218ENST00000555213 OR10J4P0C629 311 aa8.19□□□□□ -1.1
SHMT2-218ENST00000555213 IGLC2P0DOY2 106 aa8.19□□□□□ -1.1
SHMT2-218ENST00000555213 TAS2R45P59539 299 aa8.19□□□□□ -1.1
SHMT2-218ENST00000555213 C16orf54Q6UWD8 224 aa8.19□□□□□ -1.1
SHMT2-218ENST00000555213 SIGLEC15Q6ZMC9 328 aa8.19□□□□□ -1.1
SHMT2-218ENST00000555213 OR8I2Q8N0Y5 310 aa8.19□□□□□ -1.1
SHMT2-218ENST00000555213 MRAPQ8TCY5 172 aa8.19□□□□□ -1.1
SHMT2-218ENST00000555213 GLMPQ8WWB7 406 aa8.19□□□□□ -1.1
SHMT2-218ENST00000555213 GPR82Q96P67 336 aa8.19□□□□□ -1.1
SHMT2-218ENST00000555213 PAXXQ9BUH6 204 aa8.19□□□□□ -1.1
SHMT2-218ENST00000555213 TREM1Q9NP99 234 aa8.19□□□□□ -1.1
SHMT2-218ENST00000555213 VAX2Q9UIW0 290 aa8.19□□□□□ -1.1
SHMT2-218ENST00000555213 IGKV3-7A0A075B6H7 116 aa8.18□□□□□ -1.1
SHMT2-218ENST00000555213 TRAV2A0A0B4J234 112 aa8.18□□□□□ -1.1
SHMT2-218ENST00000555213 NDUFS6O75380 124 aaKnown RBP8.18□□□□□ -1.1
SHMT2-218ENST00000555213 NDUFB4O95168 129 aa8.18□□□□□ -1.1
SHMT2-218ENST00000555213 S100A1P23297 94 aa8.18□□□□□ -1.1
SHMT2-218ENST00000555213 GALR1P47211 349 aa8.18□□□□□ -1.1
SHMT2-218ENST00000555213 ATP5G3P48201 142 aa8.18□□□□□ -1.1
SHMT2-218ENST00000555213 UBE2G2P60604 165 aa8.18□□□□□ -1.1
SHMT2-218ENST00000555213 SAMD13Q5VXD3 122 aa8.18□□□□□ -1.1
SHMT2-218ENST00000555213 STXBP6Q8NFX7 210 aa8.18□□□□□ -1.1
SHMT2-218ENST00000555213 SLC35B3Q9H1N7 401 aa8.18□□□□□ -1.1
SHMT2-218ENST00000555213 MANBALQ9NQG1 85 aa8.18□□□□□ -1.1
SHMT2-218ENST00000555213 TMEM167BQ9NRX6 74 aa8.18□□□□□ -1.1
SHMT2-218ENST00000555213 A0A1W2PRE2 83 aa8.17□□□□□ -1.1
SHMT2-218ENST00000555213 ZNF785A8K8V0 405 aa8.17□□□□□ -1.1
SHMT2-218ENST00000555213 OR7C2O60412 319 aa8.17□□□□□ -1.1
SHMT2-218ENST00000555213 NBEAP1P0C6P0 100 aa8.17□□□□□ -1.1
SHMT2-218ENST00000555213 SFTA3P0C7M3 94 aa8.17□□□□□ -1.1
SHMT2-218ENST00000555213 HIST1H1EP10412 219 aaKnown RBP8.17□□□□□ -1.1
SHMT2-218ENST00000555213 RPL7P18124 248 aaKnown RBP8.17□□□□□ -1.1
SHMT2-218ENST00000555213 TFPI2P48307 235 aa8.17□□□□□ -1.1
SHMT2-218ENST00000555213 PPT1P50897 306 aa8.17□□□□□ -1.1
SHMT2-218ENST00000555213 CMC4P56277 68 aaPredicted RBP8.17□□□□□ -1.1
SHMT2-218ENST00000555213 FAM90A2PQ658T7 463 aa8.17□□□□□ -1.1
SHMT2-218ENST00000555213 GBGT1Q8N5D6 347 aa8.17□□□□□ -1.1
SHMT2-218ENST00000555213 MS4A6AQ9H2W1 248 aa8.17□□□□□ -1.1
SHMT2-218ENST00000555213 NRN1Q9NPD7 142 aa8.17□□□□□ -1.1
SHMT2-218ENST00000555213 GGTLC3B5MD39 225 aa8.16□□□□□ -1.1
SHMT2-218ENST00000555213 KRBOX1C9JBD0 128 aa8.16□□□□□ -1.1
SHMT2-218ENST00000555213 H3BTX0 84 aa8.16□□□□□ -1.1
SHMT2-218ENST00000555213 K7EIL1 84 aa8.16□□□□□ -1.1
SHMT2-218ENST00000555213 ATF4P18848 351 aaPredicted RBP8.16□□□□□ -1.1
SHMT2-218ENST00000555213 MEOX2P50222 304 aa8.16□□□□□ -1.1
SHMT2-218ENST00000555213 MEF2BQ02080 365 aaPredicted RBP8.16□□□□□ -1.1
SHMT2-218ENST00000555213 DEFB121Q5J5C9 76 aa8.16□□□□□ -1.1
SHMT2-218ENST00000555213 IQCF2Q8IXL9 164 aa8.16□□□□□ -1.1
SHMT2-218ENST00000555213 CYB561D1Q8N8Q1 229 aa8.16□□□□□ -1.1
SHMT2-218ENST00000555213 SEC11CQ9BY50 192 aa8.16□□□□□ -1.1
SHMT2-218ENST00000555213 CARHSP1Q9Y2V2 147 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms