RNA–Protein interactions for RNA: ENST00000555164.2

KTN1-219, Transcript of kinectin 1, humanhuman

TSL 4

Gene KTN1, Length 542 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-219ENST00000555164 RPL35P42766 123 aaKnown RBP1.33□□□□□ -2.2
KTN1-219ENST00000555164 POLR2HP52434 150 aaKnown RBP1.33□□□□□ -2.2
KTN1-219ENST00000555164 SURF2Q15527 256 aaPredicted RBP1.33□□□□□ -2.2
KTN1-219ENST00000555164 KRTAP26-1Q6PEX3 210 aa1.33□□□□□ -2.2
KTN1-219ENST00000555164 HRCT1Q6UXD1 115 aa1.33□□□□□ -2.2
KTN1-219ENST00000555164 DEFB119Q8N690 84 aa1.33□□□□□ -2.2
KTN1-219ENST00000555164 OR4K15Q8NH41 348 aa1.33□□□□□ -2.2
KTN1-219ENST00000555164 ISOC1Q96CN7 298 aa1.33□□□□□ -2.2
KTN1-219ENST00000555164 NAT8BQ9UHF3 227 aa1.33□□□□□ -2.2
KTN1-219ENST00000555164 MCM3APO60318 1980 aa1.33□□□□□ -2.2
KTN1-219ENST00000555164 TENM1Q9UKZ4 2725 aa1.33□□□□□ -2.2
KTN1-219ENST00000555164 TSTD3H0UI37 97 aa1.32□□□□□ -2.2
KTN1-219ENST00000555164 GABARAPH6UMI1 98 aa1.32□□□□□ -2.2
KTN1-219ENST00000555164 IFNA4P05014 189 aa1.32□□□□□ -2.2
KTN1-219ENST00000555164 S100GP29377 79 aa1.32□□□□□ -2.2
KTN1-219ENST00000555164 RAB5CP51148 216 aa1.32□□□□□ -2.2
KTN1-219ENST00000555164 KLRD1Q13241 179 aa1.32□□□□□ -2.2
KTN1-219ENST00000555164 EIF3IQ13347 325 aaKnown RBP1.32□□□□□ -2.2
KTN1-219ENST00000555164 ANGPTL5Q86XS5 388 aa1.32□□□□□ -2.2
KTN1-219ENST00000555164 GINS2Q9Y248 185 aa1.32□□□□□ -2.2
KTN1-219ENST00000555164 LAMTOR2Q9Y2Q5 125 aa1.32□□□□□ -2.2
KTN1-219ENST00000555164 MED31Q9Y3C7 131 aa1.32□□□□□ -2.2
KTN1-219ENST00000555164 MGAMO43451 1857 aa1.32□□□□□ -2.2
KTN1-219ENST00000555164 TNRC6AQ8NDV7 1962 aaKnown RBP1.32□□□□□ -2.2
KTN1-219ENST00000555164 RTL9Q8NET4 1388 aa1.32□□□□□ -2.2
KTN1-219ENST00000555164 ADGRB2O60241 1585 aa1.31□□□□□ -2.2
KTN1-219ENST00000555164 LOC110117498A0A087WWA1 95 aa1.31□□□□□ -2.2
KTN1-219ENST00000555164 ZNF736B4DX44 427 aaPredicted RBP1.31□□□□□ -2.2
KTN1-219ENST00000555164 M0R233 179 aa1.31□□□□□ -2.2
KTN1-219ENST00000555164 RPS3P23396 243 aaKnown RBP eCLIP1.31□□□□□ -2.2
KTN1-219ENST00000555164 ZNF93P35789 620 aaPredicted RBP1.31□□□□□ -2.2
KTN1-219ENST00000555164 CDK6Q00534 326 aa1.31□□□□□ -2.2
KTN1-219ENST00000555164 KRTAP21-3Q3LHN1 58 aa1.31□□□□□ -2.2
KTN1-219ENST00000555164 SAMD13Q5VXD3 122 aa1.31□□□□□ -2.2
KTN1-219ENST00000555164 C4orf22Q6V702 233 aa1.31□□□□□ -2.2
KTN1-219ENST00000555164 ZNF833PQ6ZTB9 187 aa1.31□□□□□ -2.2
KTN1-219ENST00000555164 CROCCP2Q86T23 111 aa1.31□□□□□ -2.2
KTN1-219ENST00000555164 OR5D14Q8NGL3 314 aa1.31□□□□□ -2.2
KTN1-219ENST00000555164 OR9Q1Q8NGQ5 310 aa1.31□□□□□ -2.2
KTN1-219ENST00000555164 C4orf3Q8WVX3 66 aa1.31□□□□□ -2.2
KTN1-219ENST00000555164 PATE1Q8WXA2 126 aa1.31□□□□□ -2.2
KTN1-219ENST00000555164 ANP32BQ92688 251 aaKnown RBP1.31□□□□□ -2.2
KTN1-219ENST00000555164 HYLS1Q96M11 299 aa1.31□□□□□ -2.2
KTN1-219ENST00000555164 CCDC115Q96NT0 180 aa1.31□□□□□ -2.2
KTN1-219ENST00000555164 KLK9Q9UKQ9 250 aa1.31□□□□□ -2.2
KTN1-219ENST00000555164 INTS1Q8N201 2190 aaKnown RBP1.31□□□□□ -2.2
KTN1-219ENST00000555164 SIP14410 1827 aa1.31□□□□□ -2.2
KTN1-219ENST00000555164 BCL9O00512 1426 aa1.31□□□□□ -2.2
KTN1-219ENST00000555164 TNS3Q68CZ2 1445 aa1.31□□□□□ -2.2
KTN1-219ENST00000555164 PTPRFP10586 1907 aa1.3□□□□□ -2.2
KTN1-219ENST00000555164 ALPK3Q96L96 1907 aa1.3□□□□□ -2.2
KTN1-219ENST00000555164 TRAV10A0A0B4J240 114 aa1.3□□□□□ -2.2
KTN1-219ENST00000555164 IGHV1-58A0A0C4DH39 117 aa1.3□□□□□ -2.2
KTN1-219ENST00000555164 KPNA4O00629 521 aaPredicted RBP1.3□□□□□ -2.2
KTN1-219ENST00000555164 FAM107AO95990 144 aa1.3□□□□□ -2.2
KTN1-219ENST00000555164 TEX261Q6UWH6 196 aa1.3□□□□□ -2.2
KTN1-219ENST00000555164 TMEM14EPQ6UXP3 125 aa1.3□□□□□ -2.2
KTN1-219ENST00000555164 Q8TAT8 98 aa1.3□□□□□ -2.2
KTN1-219ENST00000555164 TP53RKQ96S44 253 aa1.3□□□□□ -2.2
KTN1-219ENST00000555164 RASL12Q9NYN1 266 aa1.3□□□□□ -2.2
KTN1-219ENST00000555164 U3KQ87 197 aa1.3□□□□□ -2.2
KTN1-219ENST00000555164 RFX7Q2KHR2 1363 aa1.3□□□□□ -2.2
KTN1-219ENST00000555164 ARAP1Q96P48 1450 aa1.3□□□□□ -2.2
KTN1-219ENST00000555164 IGKV3-7A0A075B6H7 116 aa1.29□□□□□ -2.2
KTN1-219ENST00000555164 IGKV2-29A2NJV5 120 aaPredicted RBP1.29□□□□□ -2.2
KTN1-219ENST00000555164 CCDC160A6NGH7 325 aa1.29□□□□□ -2.2
KTN1-219ENST00000555164 M0R2N4 97 aa1.29□□□□□ -2.2
KTN1-219ENST00000555164 CCL16O15467 120 aa1.29□□□□□ -2.2
KTN1-219ENST00000555164 FABP2P12104 132 aa1.29□□□□□ -2.2
KTN1-219ENST00000555164 FAM216BQ8N7L0 139 aa1.29□□□□□ -2.2
KTN1-219ENST00000555164 SKA2Q8WVK7 121 aaPredicted RBP1.29□□□□□ -2.2
KTN1-219ENST00000555164 DIRC1Q969H9 104 aa1.29□□□□□ -2.2
KTN1-219ENST00000555164 RAB37Q96AX2 223 aa1.29□□□□□ -2.2
KTN1-219ENST00000555164 MUCL1Q96DR8 90 aa1.29□□□□□ -2.2
KTN1-219ENST00000555164 C19orf12Q9NSK7 152 aa1.29□□□□□ -2.2
KTN1-219ENST00000555164 TRAPPC2LQ9UL33 140 aa1.29□□□□□ -2.2
KTN1-219ENST00000555164 TRAV27A0A087WT01 109 aa1.28□□□□□ -2.2
KTN1-219ENST00000555164 A0A087WX48 190 aa1.28□□□□□ -2.2
KTN1-219ENST00000555164 hDV103S1A0JD37 113 aa1.28□□□□□ -2.2
KTN1-219ENST00000555164 OR2T8A6NH00 312 aa1.28□□□□□ -2.2
KTN1-219ENST00000555164 INE1O15225 51 aa1.28□□□□□ -2.2
KTN1-219ENST00000555164 ERC2-IT1O76042 136 aa1.28□□□□□ -2.2
KTN1-219ENST00000555164 CD2P06729 351 aa1.28□□□□□ -2.2
KTN1-219ENST00000555164 SDC2P34741 201 aa1.28□□□□□ -2.2
KTN1-219ENST00000555164 C2orf82Q6UX34 121 aa1.28□□□□□ -2.2
KTN1-219ENST00000555164 CCL4L1Q8NHW4 92 aa1.28□□□□□ -2.2
KTN1-219ENST00000555164 PYDC1Q8WXC3 89 aa1.28□□□□□ -2.2
KTN1-219ENST00000555164 GGACTQ9BVM4 153 aa1.28□□□□□ -2.2
KTN1-219ENST00000555164 TCEAL2Q9H3H9 227 aaPredicted RBP1.28□□□□□ -2.2
KTN1-219ENST00000555164 CDC42SE1Q9NRR8 79 aa1.28□□□□□ -2.2
KTN1-219ENST00000555164 TAS2R7Q9NYW3 318 aa1.28□□□□□ -2.2
KTN1-219ENST00000555164 HSPB11Q9Y547 144 aa1.28□□□□□ -2.2
KTN1-219ENST00000555164 SNURFQ9Y675 71 aa1.28□□□□□ -2.2
KTN1-219ENST00000555164 KDM6AO15550 1401 aaPredicted RBP1.28□□□□□ -2.2
KTN1-219ENST00000555164 ZFC3H1O60293 1989 aaKnown RBP1.28□□□□□ -2.2
KTN1-219ENST00000555164 TANC2Q9HCD6 1990 aa1.28□□□□□ -2.2
KTN1-219ENST00000555164 CASP8AP2Q9UKL3 1982 aa1.28□□□□□ -2.2
KTN1-219ENST00000555164 ARFGEF3Q5TH69 2177 aa1.28□□□□□ -2.2
KTN1-219ENST00000555164 TCOF1Q13428 1488 aaKnown RBP1.27□□□□□ -2.21
KTN1-219ENST00000555164 IGKV2-40A0A087WW87 121 aaPredicted RBP1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms