RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 HES1Q14469 280 aa2.76□□□□□ -1.97
VRK1-203ENST00000555067 ZNF345Q14585 488 aa2.76□□□□□ -1.97
VRK1-203ENST00000555067 OR4X2Q8NGF9 303 aa2.76□□□□□ -1.97
VRK1-203ENST00000555067 Q9BRP9 147 aa2.76□□□□□ -1.97
VRK1-203ENST00000555067 LINC00467Q9BRT7 94 aa2.76□□□□□ -1.97
VRK1-203ENST00000555067 TAS2R4Q9NYW5 299 aa2.76□□□□□ -1.97
VRK1-203ENST00000555067 CCL26Q9Y258 94 aa2.76□□□□□ -1.97
VRK1-203ENST00000555067 DISP2A7MBM2 1401 aa2.76□□□□□ -1.97
VRK1-203ENST00000555067 ROCK2O75116 1388 aaKnown RBP2.75□□□□□ -1.97
VRK1-203ENST00000555067 IBTKQ9P2D0 1353 aaPredicted RBP2.75□□□□□ -1.97
VRK1-203ENST00000555067 KDM5CP41229 1560 aa2.75□□□□□ -1.97
VRK1-203ENST00000555067 TRAV1-1A0A0B4J248 108 aa2.75□□□□□ -1.97
VRK1-203ENST00000555067 MIF4GDA9UHW6 222 aaKnown RBP2.75□□□□□ -1.97
VRK1-203ENST00000555067 J3QR89 54 aa2.75□□□□□ -1.97
VRK1-203ENST00000555067 K7ERU9 68 aa2.75□□□□□ -1.97
VRK1-203ENST00000555067 MGST1P10620 155 aaKnown RBP2.75□□□□□ -1.97
VRK1-203ENST00000555067 PEBP1P30086 187 aaKnown RBP2.75□□□□□ -1.97
VRK1-203ENST00000555067 DIAPH2-AS1Q14236 149 aa2.75□□□□□ -1.97
VRK1-203ENST00000555067 IGFBP7Q16270 282 aa2.75□□□□□ -1.97
VRK1-203ENST00000555067 FAM216BQ8N7L0 139 aa2.75□□□□□ -1.97
VRK1-203ENST00000555067 OR4B1Q8NGF8 309 aa2.75□□□□□ -1.97
VRK1-203ENST00000555067 ARL11Q969Q4 196 aa2.75□□□□□ -1.97
VRK1-203ENST00000555067 CHCHD1Q96BP2 118 aaKnown RBP2.75□□□□□ -1.97
VRK1-203ENST00000555067 MCEEQ96PE7 176 aa2.75□□□□□ -1.97
VRK1-203ENST00000555067 LINC00470Q9BZP3 86 aa2.75□□□□□ -1.97
VRK1-203ENST00000555067 PHLPP1O60346 1717 aa2.75□□□□□ -1.97
VRK1-203ENST00000555067 B4DSR2 109 aa2.74□□□□□ -1.97
VRK1-203ENST00000555067 FNDC10F2Z333 226 aa2.74□□□□□ -1.97
VRK1-203ENST00000555067 F8W036 122 aa2.74□□□□□ -1.97
VRK1-203ENST00000555067 OR1I1O60431 355 aa2.74□□□□□ -1.97
VRK1-203ENST00000555067 IGF2P01344 180 aa2.74□□□□□ -1.97
VRK1-203ENST00000555067 SLC25A5P05141 298 aaKnown RBP2.74□□□□□ -1.97
VRK1-203ENST00000555067 MAXP61244 160 aa2.74□□□□□ -1.97
VRK1-203ENST00000555067 CDK5R1Q15078 307 aa2.74□□□□□ -1.97
VRK1-203ENST00000555067 SS18Q15532 418 aa2.74□□□□□ -1.97
VRK1-203ENST00000555067 IGFL1Q6UW32 110 aa2.74□□□□□ -1.97
VRK1-203ENST00000555067 ZNF826PQ6ZT77 177 aa2.74□□□□□ -1.97
VRK1-203ENST00000555067 CTAGE3PQ8IX95 158 aa2.74□□□□□ -1.97
VRK1-203ENST00000555067 LYPD1Q8N2G4 141 aa2.74□□□□□ -1.97
VRK1-203ENST00000555067 OR8B3Q8NGG8 313 aa2.74□□□□□ -1.97
VRK1-203ENST00000555067 POP5Q969H6 163 aaKnown RBP2.74□□□□□ -1.97
VRK1-203ENST00000555067 C20orf166-AS1Q96NR2 134 aa2.74□□□□□ -1.97
VRK1-203ENST00000555067 NDUFB11Q9NX14 153 aa2.74□□□□□ -1.97
VRK1-203ENST00000555067 PRO2289Q9P1D8 64 aa2.74□□□□□ -1.97
VRK1-203ENST00000555067 TNS3Q68CZ2 1445 aa2.74□□□□□ -1.97
VRK1-203ENST00000555067 STRCQ7RTU9 1775 aa2.74□□□□□ -1.97
VRK1-203ENST00000555067 ARHGEF11O15085 1522 aa2.73□□□□□ -1.97
VRK1-203ENST00000555067 SPEF2Q9C093 1822 aa2.73□□□□□ -1.97
VRK1-203ENST00000555067 ZNF727A8MUV8 499 aa2.73□□□□□ -1.97
VRK1-203ENST00000555067 IGLV6-57P01721 117 aa2.73□□□□□ -1.97
VRK1-203ENST00000555067 QRFPP83859 136 aa2.73□□□□□ -1.97
VRK1-203ENST00000555067 TMEM155Q4W5P6 130 aa2.73□□□□□ -1.97
VRK1-203ENST00000555067 RNASE10Q5GAN6 216 aaKnown RBP2.73□□□□□ -1.97
VRK1-203ENST00000555067 LINC00301Q8NCQ3 95 aa2.73□□□□□ -1.97
VRK1-203ENST00000555067 MAGOHBQ96A72 148 aaKnown RBP2.73□□□□□ -1.97
VRK1-203ENST00000555067 ZSWIM8A7E2V4 1837 aa2.72□□□□□ -1.97
VRK1-203ENST00000555067 IGKV2D-26A0A0A0MRZ7 120 aa2.72□□□□□ -1.97
VRK1-203ENST00000555067 FAM236AA0A1B0GUQ0 79 aa2.72□□□□□ -1.97
VRK1-203ENST00000555067 FAM236BA0A1B0GV22 79 aa2.72□□□□□ -1.97
VRK1-203ENST00000555067 OR2T8A6NH00 312 aa2.72□□□□□ -1.97
VRK1-203ENST00000555067 IBA57-AS1B1ANH7 110 aa2.72□□□□□ -1.97
VRK1-203ENST00000555067 UQCRQO14949 82 aa2.72□□□□□ -1.97
VRK1-203ENST00000555067 NPFFO15130 113 aa2.72□□□□□ -1.97
VRK1-203ENST00000555067 IGLV1-51P01701 117 aa2.72□□□□□ -1.97
VRK1-203ENST00000555067 GPX1P07203 203 aa2.72□□□□□ -1.97
VRK1-203ENST00000555067 FABP4P15090 132 aa2.72□□□□□ -1.97
VRK1-203ENST00000555067 AKR1D1P51857 326 aa2.72□□□□□ -1.97
VRK1-203ENST00000555067 ROMO1P60602 79 aa2.72□□□□□ -1.97
VRK1-203ENST00000555067 COPZ1P61923 177 aa2.72□□□□□ -1.97
VRK1-203ENST00000555067 SELENOWP63302 87 aa2.72□□□□□ -1.97
VRK1-203ENST00000555067 MMGT1Q8N4V1 131 aa2.72□□□□□ -1.97
VRK1-203ENST00000555067 SLC50A1Q9BRV3 221 aa2.72□□□□□ -1.97
VRK1-203ENST00000555067 GGACTQ9BVM4 153 aa2.72□□□□□ -1.97
VRK1-203ENST00000555067 HIVEP2P31629 2446 aa2.71□□□□□ -1.98
VRK1-203ENST00000555067 ZFC3H1O60293 1989 aaKnown RBP2.71□□□□□ -1.98
VRK1-203ENST00000555067 KIAA1107Q9UPP5 1409 aa2.71□□□□□ -1.98
VRK1-203ENST00000555067 HBDP02042 147 aa2.71□□□□□ -1.98
VRK1-203ENST00000555067 EMX2Q04743 252 aa2.71□□□□□ -1.98
VRK1-203ENST00000555067 SPANXN5Q5MJ07 72 aa2.71□□□□□ -1.98
VRK1-203ENST00000555067 Q8N814 137 aa2.71□□□□□ -1.98
VRK1-203ENST00000555067 NAA38Q9BRA0 125 aaKnown RBP2.71□□□□□ -1.98
VRK1-203ENST00000555067 CXCL16Q9H2A7 254 aa2.71□□□□□ -1.98
VRK1-203ENST00000555067 FKBP11Q9NYL4 201 aa2.71□□□□□ -1.98
VRK1-203ENST00000555067 ZNF670-ZNF695F2Z2N8 137 aa2.7□□□□□ -1.98
VRK1-203ENST00000555067 SMIM24O75264 130 aa2.7□□□□□ -1.98
VRK1-203ENST00000555067 ZNF737O75373 536 aa2.7□□□□□ -1.98
VRK1-203ENST00000555067 TPT1P13693 172 aaKnown RBP2.7□□□□□ -1.98
VRK1-203ENST00000555067 SSR2P43308 183 aa2.7□□□□□ -1.98
VRK1-203ENST00000555067 RPL26P61254 145 aaKnown RBP2.7□□□□□ -1.98
VRK1-203ENST00000555067 SNRPD3P62318 126 aaKnown RBP2.7□□□□□ -1.98
VRK1-203ENST00000555067 WHAMMP3Q1A5X7 153 aa2.7□□□□□ -1.98
VRK1-203ENST00000555067 C9orf163Q8N9P6 203 aa2.7□□□□□ -1.98
VRK1-203ENST00000555067 C14orf132Q9NPU4 83 aa2.7□□□□□ -1.98
VRK1-203ENST00000555067 RPL26L1Q9UNX3 145 aaKnown RBP2.7□□□□□ -1.98
VRK1-203ENST00000555067 LHFPL6Q9Y693 200 aa2.7□□□□□ -1.98
VRK1-203ENST00000555067 LY96Q9Y6Y9 160 aa2.7□□□□□ -1.98
VRK1-203ENST00000555067 SMARCA4P51532 1647 aa2.7□□□□□ -1.98
VRK1-203ENST00000555067 NALCNQ8IZF0 1738 aa2.7□□□□□ -1.98
VRK1-203ENST00000555067 COL1A1P02452 1464 aaPredicted RBP2.7□□□□□ -1.98
VRK1-203ENST00000555067 FOCADQ5VW36 1801 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms