RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	CXCL6	P80162	114 aa		3.54	□□□□□ -1.84
PSMC6-208	ENST00000554956	MXD1	Q05195	221 aa		3.54	□□□□□ -1.84
PSMC6-208	ENST00000554956	ASAH1	Q13510	395 aa		3.54	□□□□□ -1.84
PSMC6-208	ENST00000554956	UBE2U	Q5VVX9	321 aa		3.54	□□□□□ -1.84
PSMC6-208	ENST00000554956	LGALS9C	Q6DKI2	356 aa		3.54	□□□□□ -1.84
PSMC6-208	ENST00000554956	IZUMO2	Q6UXV1	221 aa		3.54	□□□□□ -1.84
PSMC6-208	ENST00000554956	ACOT7L	Q6ZUV0	252 aa		3.54	□□□□□ -1.84
PSMC6-208	ENST00000554956	FAM24B	Q8N5W8	94 aa		3.54	□□□□□ -1.84
PSMC6-208	ENST00000554956	CD300LF	Q8TDQ1	290 aa		3.54	□□□□□ -1.84
PSMC6-208	ENST00000554956	RHPN1-AS1	Q9BWJ2	59 aa		3.54	□□□□□ -1.84
PSMC6-208	ENST00000554956	SCRT1	Q9BWW7	348 aa		3.54	□□□□□ -1.84
PSMC6-208	ENST00000554956	HINT2	Q9BX68	163 aa		3.54	□□□□□ -1.84
PSMC6-208	ENST00000554956	MFF	Q9GZY8	342 aa		3.54	□□□□□ -1.84
PSMC6-208	ENST00000554956	VCX	Q9H320	206 aa		3.54	□□□□□ -1.84
PSMC6-208	ENST00000554956	OR51M1	Q9H341	326 aa		3.54	□□□□□ -1.84
PSMC6-208	ENST00000554956	DAZ1	Q9NQZ3	744 aa	Known RBP	3.54	□□□□□ -1.84
PSMC6-208	ENST00000554956	C21orf62	Q9NYP8	219 aa		3.54	□□□□□ -1.84
PSMC6-208	ENST00000554956		Q9UF83	564 aa		3.54	□□□□□ -1.84
PSMC6-208	ENST00000554956	APLN	Q9ULZ1	77 aa		3.54	□□□□□ -1.84
PSMC6-208	ENST00000554956	F11R	Q9Y624	299 aa	Known RBP	3.54	□□□□□ -1.84
PSMC6-208	ENST00000554956	PCLO	Q9Y6V0	5065 aa		3.53	□□□□□ -1.84
PSMC6-208	ENST00000554956	IGHV3-66	A0A0C4DH42	116 aa		3.53	□□□□□ -1.84
PSMC6-208	ENST00000554956	IGHV7-4-1	A0A0J9YVY3	117 aa		3.53	□□□□□ -1.84
PSMC6-208	ENST00000554956		I3L2K1	104 aa		3.53	□□□□□ -1.84
PSMC6-208	ENST00000554956	NDUFA4	O00483	81 aa		3.53	□□□□□ -1.84
PSMC6-208	ENST00000554956	MB	P02144	154 aa		3.53	□□□□□ -1.84
PSMC6-208	ENST00000554956	STAG3L2	P0CL84	134 aa		3.53	□□□□□ -1.84
PSMC6-208	ENST00000554956	RBMY1A1	P0DJD3	496 aa	Known RBP	3.53	□□□□□ -1.84
PSMC6-208	ENST00000554956	PSMB9	P28065	219 aa		3.53	□□□□□ -1.84
PSMC6-208	ENST00000554956	ARPC4	P59998	168 aa		3.53	□□□□□ -1.84
PSMC6-208	ENST00000554956	ARL6IP1	Q15041	203 aa		3.53	□□□□□ -1.84
PSMC6-208	ENST00000554956	RBMY1F	Q15415	496 aa	Known RBP	3.53	□□□□□ -1.84
PSMC6-208	ENST00000554956	MSMO1	Q15800	293 aa		3.53	□□□□□ -1.84
PSMC6-208	ENST00000554956		Q56UQ5	140 aa		3.53	□□□□□ -1.84
PSMC6-208	ENST00000554956	SOHLH1	Q5JUK2	328 aa		3.53	□□□□□ -1.84
PSMC6-208	ENST00000554956	IDNK	Q5T6J7	187 aa		3.53	□□□□□ -1.84
PSMC6-208	ENST00000554956	AADACL3	Q5VUY0	350 aa		3.53	□□□□□ -1.84
PSMC6-208	ENST00000554956	KRTAP5-4	Q6L8H1	288 aa		3.53	□□□□□ -1.84
PSMC6-208	ENST00000554956	UBAC2	Q8NBM4	344 aa		3.53	□□□□□ -1.84
PSMC6-208	ENST00000554956	OR1L8	Q8NGR8	309 aa		3.53	□□□□□ -1.84
PSMC6-208	ENST00000554956	OR11H2	Q8NH07	326 aa		3.53	□□□□□ -1.84
PSMC6-208	ENST00000554956	GALNT14	Q96FL9	552 aa		3.53	□□□□□ -1.84
PSMC6-208	ENST00000554956	OR10C1	Q96KK4	312 aa		3.53	□□□□□ -1.84
PSMC6-208	ENST00000554956	RARRES2	Q99969	163 aa		3.53	□□□□□ -1.84
PSMC6-208	ENST00000554956	COMMD5	Q9GZQ3	224 aa		3.53	□□□□□ -1.84
PSMC6-208	ENST00000554956	FXYD6	Q9H0Q3	95 aa		3.53	□□□□□ -1.84
PSMC6-208	ENST00000554956	TMEM14B	Q9NUH8	114 aa		3.53	□□□□□ -1.84
PSMC6-208	ENST00000554956	MRPL36	Q9P0J6	103 aa	Known RBP	3.53	□□□□□ -1.84
PSMC6-208	ENST00000554956	ANAPC10	Q9UM13	185 aa		3.53	□□□□□ -1.84
PSMC6-208	ENST00000554956	KLK5	Q9Y337	293 aa	Predicted RBP	3.53	□□□□□ -1.84
PSMC6-208	ENST00000554956	OR51B2	Q9Y5P1	312 aa		3.53	□□□□□ -1.84
PSMC6-208	ENST00000554956	OR4C46	A6NHA9	309 aa		3.52	□□□□□ -1.85
PSMC6-208	ENST00000554956	NUPL2	O15504	423 aa	Known RBP	3.52	□□□□□ -1.85
PSMC6-208	ENST00000554956	MT-CO2	P00403	227 aa		3.52	□□□□□ -1.85
PSMC6-208	ENST00000554956	PMP2	P02689	132 aa		3.52	□□□□□ -1.85
PSMC6-208	ENST00000554956	F2R	P25116	425 aa		3.52	□□□□□ -1.85
PSMC6-208	ENST00000554956	RANBP1	P43487	201 aa		3.52	□□□□□ -1.85
PSMC6-208	ENST00000554956	HSPA13	P48723	471 aa		3.52	□□□□□ -1.85
PSMC6-208	ENST00000554956	MEOX2	P50222	304 aa		3.52	□□□□□ -1.85
PSMC6-208	ENST00000554956	DEFB131A	P59861	70 aa		3.52	□□□□□ -1.85
PSMC6-208	ENST00000554956	SPINK9	Q5DT21	86 aa		3.52	□□□□□ -1.85
PSMC6-208	ENST00000554956	LAMTOR1	Q6IAA8	161 aa		3.52	□□□□□ -1.85
PSMC6-208	ENST00000554956	TOMM20L	Q6UXN7	152 aa		3.52	□□□□□ -1.85
PSMC6-208	ENST00000554956		Q8NAQ8	132 aa		3.52	□□□□□ -1.85
PSMC6-208	ENST00000554956	OR1S2	Q8NGQ3	325 aa		3.52	□□□□□ -1.85
PSMC6-208	ENST00000554956	LSM10	Q969L4	123 aa	Known RBP	3.52	□□□□□ -1.85
PSMC6-208	ENST00000554956	SLC25A46	Q96AG3	418 aa		3.52	□□□□□ -1.85
PSMC6-208	ENST00000554956	DGCR14	Q96DF8	476 aa	Known RBP	3.52	□□□□□ -1.85
PSMC6-208	ENST00000554956	PGLYRP4	Q96LB8	373 aa		3.52	□□□□□ -1.85
PSMC6-208	ENST00000554956	KIR2DL4	Q99706	377 aa		3.52	□□□□□ -1.85
PSMC6-208	ENST00000554956	ZNF2	Q9BSG1	426 aa	Predicted RBP	3.52	□□□□□ -1.85
PSMC6-208	ENST00000554956	RNF126	Q9BV68	326 aa		3.52	□□□□□ -1.85
PSMC6-208	ENST00000554956	YTHDF1	Q9BYJ9	559 aa	Known RBP	3.52	□□□□□ -1.85
PSMC6-208	ENST00000554956	NXF2	Q9GZY0	626 aa	Known RBP	3.52	□□□□□ -1.85
PSMC6-208	ENST00000554956	MS4A6A	Q9H2W1	248 aa		3.52	□□□□□ -1.85
PSMC6-208	ENST00000554956	COMMD9	Q9P000	198 aa		3.52	□□□□□ -1.85
PSMC6-208	ENST00000554956	FAT2	Q9NYQ8	4349 aa		3.51	□□□□□ -1.85
PSMC6-208	ENST00000554956	IGLV8-61	A0A075B6I0	122 aa		3.51	□□□□□ -1.85
PSMC6-208	ENST00000554956	TRAV14DV4	A0A0A6YYC5	116 aa		3.51	□□□□□ -1.85
PSMC6-208	ENST00000554956	LOC100506127	A0A0U1RQW1	187 aa		3.51	□□□□□ -1.85
PSMC6-208	ENST00000554956		A0A1W2PPV4	95 aa		3.51	□□□□□ -1.85
PSMC6-208	ENST00000554956	KNCN	A6PVL3	124 aa		3.51	□□□□□ -1.85
PSMC6-208	ENST00000554956	IGLL5	B9A064	214 aa		3.51	□□□□□ -1.85
PSMC6-208	ENST00000554956	YIF1A	O95070	293 aa		3.51	□□□□□ -1.85
PSMC6-208	ENST00000554956		P0C879	139 aa		3.51	□□□□□ -1.85
PSMC6-208	ENST00000554956	HLA-DMA	P28067	261 aa		3.51	□□□□□ -1.85
PSMC6-208	ENST00000554956	GABARAPL2	P60520	117 aa		3.51	□□□□□ -1.85
PSMC6-208	ENST00000554956	CATR1	Q13166	79 aa		3.51	□□□□□ -1.85
PSMC6-208	ENST00000554956	ZNF767P	Q75MW2	155 aa		3.51	□□□□□ -1.85
PSMC6-208	ENST00000554956	TCF24	Q7RTU0	167 aa		3.51	□□□□□ -1.85
PSMC6-208	ENST00000554956	OR1P1	Q8NH06	330 aa		3.51	□□□□□ -1.85
PSMC6-208	ENST00000554956	MITD1	Q8WV92	249 aa		3.51	□□□□□ -1.85
PSMC6-208	ENST00000554956	MRGPRF	Q96AM1	343 aa		3.51	□□□□□ -1.85
PSMC6-208	ENST00000554956	C11orf68	Q9H3H3	251 aa	Known RBP	3.51	□□□□□ -1.85
PSMC6-208	ENST00000554956	VSIR	Q9H7M9	311 aa		3.51	□□□□□ -1.85
PSMC6-208	ENST00000554956	RAB26	Q9ULW5	256 aa		3.51	□□□□□ -1.85
PSMC6-208	ENST00000554956	SSR3	Q9UNL2	185 aa		3.51	□□□□□ -1.85
PSMC6-208	ENST00000554956	DNAH2	Q9P225	4427 aa		3.51	□□□□□ -1.85
PSMC6-208	ENST00000554956	HECTD4	Q9Y4D8	3996 aa		3.51	□□□□□ -1.85
PSMC6-208	ENST00000554956		A0A0A6YYH2	397 aa		3.5	□□□□□ -1.85

Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms