RNA–Protein interactions for RNA: ENST00000554805.6

SYNE2-213, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-213ENST00000554805 ORAOV1Q8WV07 137 aa7.57□□□□□ -1.2
SYNE2-213ENST00000554805 CHCHD1Q96BP2 118 aaKnown RBP7.57□□□□□ -1.2
SYNE2-213ENST00000554805 MYO18BQ8IUG5 2567 aa7.57□□□□□ -1.2
SYNE2-213ENST00000554805 CCL25O15444 150 aa7.57□□□□□ -1.2
SYNE2-213ENST00000554805 APOHP02749 345 aaPredicted RBP7.57□□□□□ -1.2
SYNE2-213ENST00000554805 IL4P05112 153 aa7.57□□□□□ -1.2
SYNE2-213ENST00000554805 IGLC1P0CG04 106 aa7.57□□□□□ -1.2
SYNE2-213ENST00000554805 TCTAP57738 103 aa7.57□□□□□ -1.2
SYNE2-213ENST00000554805 RNF151Q2KHN1 245 aa7.57□□□□□ -1.2
SYNE2-213ENST00000554805 KLF17Q5JT82 389 aaPredicted RBP7.57□□□□□ -1.2
SYNE2-213ENST00000554805 PRSS22Q9GZN4 317 aa7.57□□□□□ -1.2
SYNE2-213ENST00000554805 HSPB8Q9UJY1 196 aa7.57□□□□□ -1.2
SYNE2-213ENST00000554805 COX11Q9Y6N1 276 aa7.57□□□□□ -1.2
SYNE2-213ENST00000554805 NOTCH3Q9UM47 2321 aa7.57□□□□□ -1.2
SYNE2-213ENST00000554805 C19orf71A6NCJ1 209 aa7.56□□□□□ -1.2
SYNE2-213ENST00000554805 ARMS2P0C7Q2 107 aa7.56□□□□□ -1.2
SYNE2-213ENST00000554805 DLX6P56179 175 aa7.56□□□□□ -1.2
SYNE2-213ENST00000554805 CT83Q5H943 113 aa7.56□□□□□ -1.2
SYNE2-213ENST00000554805 SMIM12Q96EX1 92 aa7.56□□□□□ -1.2
SYNE2-213ENST00000554805 PKD1L2Q7Z442 2459 aa7.56□□□□□ -1.2
SYNE2-213ENST00000554805 A6NJY4 79 aa7.56□□□□□ -1.2
SYNE2-213ENST00000554805 BUB1B-PAK6H3BSN5 160 aa7.56□□□□□ -1.2
SYNE2-213ENST00000554805 M0R3E3 92 aa7.56□□□□□ -1.2
SYNE2-213ENST00000554805 CD3EP07766 207 aa7.56□□□□□ -1.2
SYNE2-213ENST00000554805 DCHS2Q6V1P9 2916 aa7.56□□□□□ -1.2
SYNE2-213ENST00000554805 GNG7O60262 68 aa7.55□□□□□ -1.2
SYNE2-213ENST00000554805 C8orf31Q8N9H6 132 aa7.55□□□□□ -1.2
SYNE2-213ENST00000554805 OR8A1Q8NGG7 326 aa7.55□□□□□ -1.2
SYNE2-213ENST00000554805 ST20Q9HBF5 79 aa7.55□□□□□ -1.2
SYNE2-213ENST00000554805 PSG8Q9UQ74 426 aa7.55□□□□□ -1.2
SYNE2-213ENST00000554805 HLA-DRB1P01911 266 aa7.55□□□□□ -1.2
SYNE2-213ENST00000554805 UBE2V1Q13404 147 aa7.55□□□□□ -1.2
SYNE2-213ENST00000554805 MRGPRG-AS1Q2M3A8 158 aa7.55□□□□□ -1.2
SYNE2-213ENST00000554805 LINC01560Q8TB33 94 aa7.55□□□□□ -1.2
SYNE2-213ENST00000554805 ZC2HC1AQ96GY0 325 aa7.55□□□□□ -1.2
SYNE2-213ENST00000554805 AP5S1Q9NUS5 200 aa7.55□□□□□ -1.2
SYNE2-213ENST00000554805 TIMM23O14925 209 aa7.55□□□□□ -1.2
SYNE2-213ENST00000554805 ARF6P62330 175 aa7.55□□□□□ -1.2
SYNE2-213ENST00000554805 FBLN7Q53RD9 439 aa7.55□□□□□ -1.2
SYNE2-213ENST00000554805 GFRA4Q9GZZ7 299 aa7.55□□□□□ -1.2
SYNE2-213ENST00000554805 FAM90A27PA6NNH2 459 aa7.54□□□□□ -1.2
SYNE2-213ENST00000554805 TEX22C9J3V5 150 aa7.54□□□□□ -1.2
SYNE2-213ENST00000554805 APOBEC3AP31941 199 aaPredicted RBP7.54□□□□□ -1.2
SYNE2-213ENST00000554805 CSN1S1P47710 185 aa7.54□□□□□ -1.2
SYNE2-213ENST00000554805 MUC15Q8N387 334 aa7.54□□□□□ -1.2
SYNE2-213ENST00000554805 AAMDCQ9H7C9 122 aa7.54□□□□□ -1.2
SYNE2-213ENST00000554805 IGKV1-17P01599 117 aa7.54□□□□□ -1.2
SYNE2-213ENST00000554805 KAAG1Q9UBP8 84 aa7.54□□□□□ -1.2
SYNE2-213ENST00000554805 RNF24Q9Y225 148 aa7.54□□□□□ -1.2
SYNE2-213ENST00000554805 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.54□□□□□ -1.2
SYNE2-213ENST00000554805 IGHV3-23P01764 117 aa7.54□□□□□ -1.2
SYNE2-213ENST00000554805 PET117Q6UWS5 81 aa7.54□□□□□ -1.2
SYNE2-213ENST00000554805 RNF125Q96EQ8 232 aa7.54□□□□□ -1.2
SYNE2-213ENST00000554805 NDFIP1Q9BT67 221 aa7.54□□□□□ -1.2
SYNE2-213ENST00000554805 TRBV19A0A075B6N1 114 aa7.53□□□□□ -1.2
SYNE2-213ENST00000554805 A0A087X0K7 114 aa7.53□□□□□ -1.2
SYNE2-213ENST00000554805 NCBP2LA6PVI3 153 aaKnown RBP7.53□□□□□ -1.2
SYNE2-213ENST00000554805 SHISA9B4DS77 424 aa7.53□□□□□ -1.2
SYNE2-213ENST00000554805 HAX1O00165 279 aa7.53□□□□□ -1.2
SYNE2-213ENST00000554805 PLP1P60201 277 aa7.53□□□□□ -1.2
SYNE2-213ENST00000554805 FAM120AOSQ5T036 256 aa7.53□□□□□ -1.2
SYNE2-213ENST00000554805 TNFRSF14Q92956 283 aa7.53□□□□□ -1.2
SYNE2-213ENST00000554805 TMEM189A5PLL7 270 aa7.53□□□□□ -1.2
SYNE2-213ENST00000554805 B9A039 149 aa7.53□□□□□ -1.2
SYNE2-213ENST00000554805 I3L2K1 104 aa7.53□□□□□ -1.2
SYNE2-213ENST00000554805 TNFRSF13BO14836 293 aaPredicted RBP7.53□□□□□ -1.2
SYNE2-213ENST00000554805 LY6HO94772 140 aa7.53□□□□□ -1.2
SYNE2-213ENST00000554805 FXYD7P58549 80 aa7.53□□□□□ -1.2
SYNE2-213ENST00000554805 RBPJQ06330 500 aa7.53□□□□□ -1.2
SYNE2-213ENST00000554805 SHANK2-AS3Q9BTD1 123 aa7.53□□□□□ -1.2
SYNE2-213ENST00000554805 IGHV3OR16-8A0A075B7F1 116 aa7.53□□□□□ -1.2
SYNE2-213ENST00000554805 IGHV3-35A0A0C4DH35 117 aa7.53□□□□□ -1.2
SYNE2-213ENST00000554805 FAM231BA6NCW3 169 aa7.53□□□□□ -1.2
SYNE2-213ENST00000554805 IGLV1-47P01700 117 aa7.53□□□□□ -1.2
SYNE2-213ENST00000554805 CRYGBP07316 175 aa7.53□□□□□ -1.2
SYNE2-213ENST00000554805 TMEM11P17152 192 aa7.53□□□□□ -1.2
SYNE2-213ENST00000554805 OR10AG1Q8NH19 301 aa7.53□□□□□ -1.2
SYNE2-213ENST00000554805 C8orf49Q96NF6 230 aa7.53□□□□□ -1.2
SYNE2-213ENST00000554805 TMEM14CQ9P0S9 112 aa7.53□□□□□ -1.2
SYNE2-213ENST00000554805 LY6DQ14210 128 aa7.52□□□□□ -1.21
SYNE2-213ENST00000554805 C12orf54Q6X4T0 127 aa7.52□□□□□ -1.21
SYNE2-213ENST00000554805 CEACAM3P40198 252 aa7.52□□□□□ -1.21
SYNE2-213ENST00000554805 PSG3Q16557 428 aa7.52□□□□□ -1.21
SYNE2-213ENST00000554805 RNASE8Q8TDE3 154 aaKnown RBP7.52□□□□□ -1.21
SYNE2-213ENST00000554805 SETD2Q9BYW2 2564 aaPredicted RBP7.52□□□□□ -1.21
SYNE2-213ENST00000554805 CELSR1Q9NYQ6 3014 aa7.52□□□□□ -1.21
SYNE2-213ENST00000554805 IGLV2-11P01706 119 aa7.51□□□□□ -1.21
SYNE2-213ENST00000554805 UQCRFS1P47985 274 aa7.51□□□□□ -1.21
SYNE2-213ENST00000554805 KLRD1Q13241 179 aa7.51□□□□□ -1.21
SYNE2-213ENST00000554805 CSPG4Q6UVK1 2322 aa7.51□□□□□ -1.21
SYNE2-213ENST00000554805 TMEM213A2RRL7 107 aa7.51□□□□□ -1.21
SYNE2-213ENST00000554805 K7EIM0 57 aa7.51□□□□□ -1.21
SYNE2-213ENST00000554805 IFI27P40305 119 aaPredicted RBP7.51□□□□□ -1.21
SYNE2-213ENST00000554805 LYZL1Q6UWQ5 148 aa7.51□□□□□ -1.21
SYNE2-213ENST00000554805 S100A7AQ86SG5 101 aa7.51□□□□□ -1.21
SYNE2-213ENST00000554805 IGKV2-40A0A087WW87 121 aaPredicted RBP7.51□□□□□ -1.21
SYNE2-213ENST00000554805 D6R8Y8 96 aa7.51□□□□□ -1.21
SYNE2-213ENST00000554805 NBR2O15453 112 aa7.51□□□□□ -1.21
SYNE2-213ENST00000554805 IGKV2D-40P01614 121 aaPredicted RBP7.51□□□□□ -1.21
SYNE2-213ENST00000554805 IGFL4Q6B9Z1 124 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms