RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 SMDT1Q9H4I9 107 aa10.89□□□□□ -0.67
SHOX2-206ENST00000554685 ZNF586Q9NXT0 402 aa10.89□□□□□ -0.67
SHOX2-206ENST00000554685 CLEC5AQ9NY25 188 aa10.89□□□□□ -0.67
SHOX2-206ENST00000554685 SETD2Q9BYW2 2564 aaPredicted RBP10.89□□□□□ -0.67
SHOX2-206ENST00000554685 LOC102723971A0A1B0GUV8 181 aa10.88□□□□□ -0.67
SHOX2-206ENST00000554685 H3BQ15 152 aa10.88□□□□□ -0.67
SHOX2-206ENST00000554685 PAGE4O60829 102 aa10.88□□□□□ -0.67
SHOX2-206ENST00000554685 NDUFS6O75380 124 aaKnown RBP10.88□□□□□ -0.67
SHOX2-206ENST00000554685 UBE2G2P60604 165 aa10.88□□□□□ -0.67
SHOX2-206ENST00000554685 PAFAH1B2P68402 229 aa10.88□□□□□ -0.67
SHOX2-206ENST00000554685 HAGHQ16775 308 aa10.88□□□□□ -0.67
SHOX2-206ENST00000554685 TOR2AQ5JU69 321 aa10.88□□□□□ -0.67
SHOX2-206ENST00000554685 ZNF506Q5JVG8 444 aa10.88□□□□□ -0.67
SHOX2-206ENST00000554685 CST9LP1Q5W188 147 aa10.88□□□□□ -0.67
SHOX2-206ENST00000554685 UQCC3Q6UW78 93 aa10.88□□□□□ -0.67
SHOX2-206ENST00000554685 TCEAL7Q9BRU2 100 aa10.88□□□□□ -0.67
SHOX2-206ENST00000554685 MCRIP2Q9BUT9 160 aaKnown RBP10.88□□□□□ -0.67
SHOX2-206ENST00000554685 AAMDCQ9H7C9 122 aa10.88□□□□□ -0.67
SHOX2-206ENST00000554685 NRN1Q9NPD7 142 aa10.88□□□□□ -0.67
SHOX2-206ENST00000554685 SMAD5-AS1Q9Y6J3 95 aa10.88□□□□□ -0.67
SHOX2-206ENST00000554685 ATRQ13535 2644 aa10.87□□□□□ -0.67
SHOX2-206ENST00000554685 TRAV25A0A0B4J276 109 aa10.87□□□□□ -0.67
SHOX2-206ENST00000554685 FAM74A7A6NL05 159 aa10.87□□□□□ -0.67
SHOX2-206ENST00000554685 EDN2P20800 178 aa10.87□□□□□ -0.67
SHOX2-206ENST00000554685 MEF2BQ02080 365 aaPredicted RBP10.87□□□□□ -0.67
SHOX2-206ENST00000554685 FAM90A2PQ658T7 463 aa10.87□□□□□ -0.67
SHOX2-206ENST00000554685 RBPMS2Q6ZRY4 209 aaKnown RBP10.87□□□□□ -0.67
SHOX2-206ENST00000554685 OR2K2Q8NGT1 345 aa10.87□□□□□ -0.67
SHOX2-206ENST00000554685 OTORQ9NRC9 128 aa10.87□□□□□ -0.67
SHOX2-206ENST00000554685 MLXQ9UH92 298 aa10.87□□□□□ -0.67
SHOX2-206ENST00000554685 PRELID1Q9Y255 219 aa10.87□□□□□ -0.67
SHOX2-206ENST00000554685 TRAV2A0A0B4J234 112 aa10.86□□□□□ -0.67
SHOX2-206ENST00000554685 C11orf94C9JXX5 98 aa10.86□□□□□ -0.67
SHOX2-206ENST00000554685 DNASE2O00115 360 aaPredicted RBP10.86□□□□□ -0.67
SHOX2-206ENST00000554685 PDE6DO43924 150 aa10.86□□□□□ -0.67
SHOX2-206ENST00000554685 SAP30O75446 220 aa10.86□□□□□ -0.67
SHOX2-206ENST00000554685 INSL3P51460 131 aa10.86□□□□□ -0.67
SHOX2-206ENST00000554685 RANP62826 216 aaKnown RBP10.86□□□□□ -0.67
SHOX2-206ENST00000554685 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.86□□□□□ -0.67
SHOX2-206ENST00000554685 ADAMTSL5Q6ZMM2 481 aa10.86□□□□□ -0.67
SHOX2-206ENST00000554685 EIF4E3Q8N5X7 224 aaKnown RBP10.86□□□□□ -0.67
SHOX2-206ENST00000554685 Q9H3A6 140 aa10.86□□□□□ -0.67
SHOX2-206ENST00000554685 YTHDF2Q9Y5A9 579 aaKnown RBP10.86□□□□□ -0.67
SHOX2-206ENST00000554685 F6UZH7 168 aa10.85□□□□□ -0.67
SHOX2-206ENST00000554685 TSPAN4O14817 238 aa10.85□□□□□ -0.67
SHOX2-206ENST00000554685 NDUFB4O95168 129 aa10.85□□□□□ -0.67
SHOX2-206ENST00000554685 CD33P20138 364 aa10.85□□□□□ -0.67
SHOX2-206ENST00000554685 ID1P41134 155 aa10.85□□□□□ -0.67
SHOX2-206ENST00000554685 ICAM4Q14773 271 aa10.85□□□□□ -0.67
SHOX2-206ENST00000554685 DEFB114Q30KQ6 69 aa10.85□□□□□ -0.67
SHOX2-206ENST00000554685 C9orf66Q5T8R8 295 aa10.85□□□□□ -0.67
SHOX2-206ENST00000554685 ARL6IP6Q8N6S5 226 aa10.85□□□□□ -0.67
SHOX2-206ENST00000554685 CMTM2Q8TAZ6 248 aa10.85□□□□□ -0.67
SHOX2-206ENST00000554685 RXFP4Q8TDU9 374 aa10.85□□□□□ -0.67
SHOX2-206ENST00000554685 C16orf92Q96LL3 132 aa10.85□□□□□ -0.67
SHOX2-206ENST00000554685 TREM1Q9NP99 234 aa10.85□□□□□ -0.67
SHOX2-206ENST00000554685 ZNF331Q9NQX6 463 aaPredicted RBP10.85□□□□□ -0.67
SHOX2-206ENST00000554685 PGPA6NDG6 321 aa10.84□□□□□ -0.67
SHOX2-206ENST00000554685 H3BTX0 84 aa10.84□□□□□ -0.67
SHOX2-206ENST00000554685 ISLRO14498 428 aa10.84□□□□□ -0.67
SHOX2-206ENST00000554685 SNRPCP09234 159 aaKnown RBP10.84□□□□□ -0.67
SHOX2-206ENST00000554685 CSN1S1P47710 185 aa10.84□□□□□ -0.67
SHOX2-206ENST00000554685 SUMO1P63165 101 aaKnown RBP10.84□□□□□ -0.67
SHOX2-206ENST00000554685 C5orf17Q8NAS9 161 aa10.84□□□□□ -0.67
SHOX2-206ENST00000554685 MRPL53Q96EL3 112 aaKnown RBP10.84□□□□□ -0.67
SHOX2-206ENST00000554685 C17orf77Q96MU5 243 aa10.84□□□□□ -0.67
SHOX2-206ENST00000554685 SPAG8Q99932 426 aaPredicted RBP10.84□□□□□ -0.67
SHOX2-206ENST00000554685 RARRES2Q99969 163 aa10.84□□□□□ -0.67
SHOX2-206ENST00000554685 GPR61Q9BZJ8 451 aa10.84□□□□□ -0.67
SHOX2-206ENST00000554685 MS4A6AQ9H2W1 248 aa10.84□□□□□ -0.67
SHOX2-206ENST00000554685 FBN1P35555 2871 aaKnown RBP10.84□□□□□ -0.67
SHOX2-206ENST00000554685 GGTLC3B5MD39 225 aa10.83□□□□□ -0.68
SHOX2-206ENST00000554685 TMEM250H0YL14 139 aa10.83□□□□□ -0.68
SHOX2-206ENST00000554685 SLC17A3O00476 420 aa10.83□□□□□ -0.68
SHOX2-206ENST00000554685 SLC25A5P05141 298 aaKnown RBP10.83□□□□□ -0.68
SHOX2-206ENST00000554685 ATP5G3P48201 142 aa10.83□□□□□ -0.68
SHOX2-206ENST00000554685 LCN12Q6JVE5 192 aa10.83□□□□□ -0.68
SHOX2-206ENST00000554685 WFDC9Q8NEX5 89 aa10.83□□□□□ -0.68
SHOX2-206ENST00000554685 HIST1H2BAQ96A08 127 aa10.83□□□□□ -0.68
SHOX2-206ENST00000554685 RPUSD4Q96CM3 377 aaKnown RBP10.83□□□□□ -0.68
SHOX2-206ENST00000554685 IGKV3-7A0A075B6H7 116 aa10.82□□□□□ -0.68
SHOX2-206ENST00000554685 SERTM2A0A1B0GWG4 89 aa10.82□□□□□ -0.68
SHOX2-206ENST00000554685 OR4C46A6NHA9 309 aa10.82□□□□□ -0.68
SHOX2-206ENST00000554685 K7EQM0 130 aa10.82□□□□□ -0.68
SHOX2-206ENST00000554685 SOCS3O14543 225 aa10.82□□□□□ -0.68
SHOX2-206ENST00000554685 IGLV1-51P01701 117 aa10.82□□□□□ -0.68
SHOX2-206ENST00000554685 CD81P60033 236 aa10.82□□□□□ -0.68
SHOX2-206ENST00000554685 SNRPD3P62318 126 aaKnown RBP10.82□□□□□ -0.68
SHOX2-206ENST00000554685 CD300EQ496F6 205 aaPredicted RBP10.82□□□□□ -0.68
SHOX2-206ENST00000554685 CCDC28AQ8IWP9 274 aa10.82□□□□□ -0.68
SHOX2-206ENST00000554685 TMEM61Q8N0U2 210 aa10.82□□□□□ -0.68
SHOX2-206ENST00000554685 GBGT1Q8N5D6 347 aa10.82□□□□□ -0.68
SHOX2-206ENST00000554685 SLC35B3Q9H1N7 401 aa10.82□□□□□ -0.68
SHOX2-206ENST00000554685 K7EQG2 157 aa10.81□□□□□ -0.68
SHOX2-206ENST00000554685 EXOC3-AS1Q8N2X6 119 aa10.81□□□□□ -0.68
SHOX2-206ENST00000554685 DCANP1Q8TF63 244 aa10.81□□□□□ -0.68
SHOX2-206ENST00000554685 C11orf52Q96A22 123 aa10.81□□□□□ -0.68
SHOX2-206ENST00000554685 EPDR1Q9UM22 224 aa10.81□□□□□ -0.68
SHOX2-206ENST00000554685 SRP19P09132 144 aaKnown RBP10.8□□□□□ -0.68
SHOX2-206ENST00000554685 TFPI2P48307 235 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms