RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 SULT1C2O00338 296 aa3.39□□□□□ -1.87
ATXN3-228ENST00000554592 RBFOX2O43251 390 aaKnown RBP eCLIP3.39□□□□□ -1.87
ATXN3-228ENST00000554592 HPRT1P00492 218 aa3.39□□□□□ -1.87
ATXN3-228ENST00000554592 GIPP09681 153 aaPredicted RBP3.39□□□□□ -1.87
ATXN3-228ENST00000554592 NQO2P16083 231 aa3.39□□□□□ -1.87
ATXN3-228ENST00000554592 NFYAP23511 347 aaPredicted RBP3.39□□□□□ -1.87
ATXN3-228ENST00000554592 BTCP35070 178 aa3.39□□□□□ -1.87
ATXN3-228ENST00000554592 EMP1P54849 157 aa3.39□□□□□ -1.87
ATXN3-228ENST00000554592 TAS2R31P59538 309 aa3.39□□□□□ -1.87
ATXN3-228ENST00000554592 WT1-ASQ06250 92 aa3.39□□□□□ -1.87
ATXN3-228ENST00000554592 FCN2Q15485 313 aa3.39□□□□□ -1.87
ATXN3-228ENST00000554592 POU2AF1Q16633 256 aa3.39□□□□□ -1.87
ATXN3-228ENST00000554592 Q5BKY6 102 aa3.39□□□□□ -1.87
ATXN3-228ENST00000554592 ACTL10Q5JWF8 245 aa3.39□□□□□ -1.87
ATXN3-228ENST00000554592 TMEM69Q5SWH9 247 aa3.39□□□□□ -1.87
ATXN3-228ENST00000554592 LCE1FQ5T754 118 aa3.39□□□□□ -1.87
ATXN3-228ENST00000554592 TOMM20LQ6UXN7 152 aa3.39□□□□□ -1.87
ATXN3-228ENST00000554592 Q6ZVQ6 151 aa3.39□□□□□ -1.87
ATXN3-228ENST00000554592 SPAG16Q8N0X2 631 aa3.39□□□□□ -1.87
ATXN3-228ENST00000554592 C15orf53Q8NAA6 179 aa3.39□□□□□ -1.87
ATXN3-228ENST00000554592 ZNF680Q8NEM1 530 aa3.39□□□□□ -1.87
ATXN3-228ENST00000554592 OR1L8Q8NGR8 309 aa3.39□□□□□ -1.87
ATXN3-228ENST00000554592 OR5H6Q8NGV6 325 aa3.39□□□□□ -1.87
ATXN3-228ENST00000554592 OR10R2Q8NGX6 335 aa3.39□□□□□ -1.87
ATXN3-228ENST00000554592 FRZBQ92765 325 aa3.39□□□□□ -1.87
ATXN3-228ENST00000554592 FAM3DQ96BQ1 224 aa3.39□□□□□ -1.87
ATXN3-228ENST00000554592 S100A16Q96FQ6 103 aaKnown RBP3.39□□□□□ -1.87
ATXN3-228ENST00000554592 C18orf15Q96N68 181 aa3.39□□□□□ -1.87
ATXN3-228ENST00000554592 RAB40CQ96S21 281 aa3.39□□□□□ -1.87
ATXN3-228ENST00000554592 NIPSNAP3BQ9BS92 247 aa3.39□□□□□ -1.87
ATXN3-228ENST00000554592 NDUFA4L2Q9NRX3 87 aa3.39□□□□□ -1.87
ATXN3-228ENST00000554592 IGKV1D-8A0A087WSZ0 117 aa3.38□□□□□ -1.87
ATXN3-228ENST00000554592 IGKV1D-13A0A0B4J2D9 117 aa3.38□□□□□ -1.87
ATXN3-228ENST00000554592 IGHV3-66A0A0C4DH42 116 aa3.38□□□□□ -1.87
ATXN3-228ENST00000554592 ANKRD20A5PA0PJZ0 165 aa3.38□□□□□ -1.87
ATXN3-228ENST00000554592 METTL21EPA6NDL7 271 aa3.38□□□□□ -1.87
ATXN3-228ENST00000554592 KRBOX1C9JBD0 128 aa3.38□□□□□ -1.87
ATXN3-228ENST00000554592 MFNGO00587 321 aa3.38□□□□□ -1.87
ATXN3-228ENST00000554592 IGKV1-13P0DP09 117 aa3.38□□□□□ -1.87
ATXN3-228ENST00000554592 HTN3P15516 51 aa3.38□□□□□ -1.87
ATXN3-228ENST00000554592 HIST1H1DP16402 221 aaKnown RBP3.38□□□□□ -1.87
ATXN3-228ENST00000554592 NPPCP23582 126 aa3.38□□□□□ -1.87
ATXN3-228ENST00000554592 DTYMKP23919 212 aa3.38□□□□□ -1.87
ATXN3-228ENST00000554592 CLDN12P56749 244 aa3.38□□□□□ -1.87
ATXN3-228ENST00000554592 TAS2R20P59543 309 aa3.38□□□□□ -1.87
ATXN3-228ENST00000554592 ARL6IP1Q15041 203 aa3.38□□□□□ -1.87
ATXN3-228ENST00000554592 MSMO1Q15800 293 aa3.38□□□□□ -1.87
ATXN3-228ENST00000554592 Q5VSD8 79 aa3.38□□□□□ -1.87
ATXN3-228ENST00000554592 LPCAT3Q6P1A2 487 aa3.38□□□□□ -1.87
ATXN3-228ENST00000554592 CD164L2Q6UWJ8 174 aa3.38□□□□□ -1.87
ATXN3-228ENST00000554592 ZNF705AQ6ZN79 300 aaPredicted RBP3.38□□□□□ -1.87
ATXN3-228ENST00000554592 EIF4E3Q8N5X7 224 aaKnown RBP3.38□□□□□ -1.87
ATXN3-228ENST00000554592 STXBP6Q8NFX7 210 aa3.38□□□□□ -1.87
ATXN3-228ENST00000554592 OR1P1Q8NH06 330 aa3.38□□□□□ -1.87
ATXN3-228ENST00000554592 ZNRF2Q8NHG8 242 aa3.38□□□□□ -1.87
ATXN3-228ENST00000554592 LSM10Q969L4 123 aaKnown RBP3.38□□□□□ -1.87
ATXN3-228ENST00000554592 SLC25A38Q96DW6 304 aa3.38□□□□□ -1.87
ATXN3-228ENST00000554592 HINT2Q9BX68 163 aa3.38□□□□□ -1.87
ATXN3-228ENST00000554592 FAM212BQ9NTI7 297 aaPredicted RBP3.38□□□□□ -1.87
ATXN3-228ENST00000554592 NUDT15Q9NV35 164 aa3.38□□□□□ -1.87
ATXN3-228ENST00000554592 XCL2Q9UBD3 114 aa3.38□□□□□ -1.87
ATXN3-228ENST00000554592 PUS1Q9Y606 427 aaKnown RBP eCLIP3.38□□□□□ -1.87
ATXN3-228ENST00000554592 RFNGQ9Y644 331 aa3.38□□□□□ -1.87
ATXN3-228ENST00000554592 UBR4Q5T4S7 5183 aa3.38□□□□□ -1.87
ATXN3-228ENST00000554592 ZNF705FA8MVS1 300 aaPredicted RBP3.37□□□□□ -1.87
ATXN3-228ENST00000554592 I3L2K1 104 aa3.37□□□□□ -1.87
ATXN3-228ENST00000554592 TNFSF12O43508 249 aa3.37□□□□□ -1.87
ATXN3-228ENST00000554592 SSNA1O43805 119 aa3.37□□□□□ -1.87
ATXN3-228ENST00000554592 GNG7O60262 68 aa3.37□□□□□ -1.87
ATXN3-228ENST00000554592 B3GALNT1O75752 331 aa3.37□□□□□ -1.87
ATXN3-228ENST00000554592 NDUFB6O95139 128 aa3.37□□□□□ -1.87
ATXN3-228ENST00000554592 ZNF688P0C7X2 276 aa3.37□□□□□ -1.87
ATXN3-228ENST00000554592 ZNF705DP0CH99 300 aaPredicted RBP3.37□□□□□ -1.87
ATXN3-228ENST00000554592 ZNF705BP0CI00 300 aaPredicted RBP3.37□□□□□ -1.87
ATXN3-228ENST00000554592 GNRHRP30968 328 aa3.37□□□□□ -1.87
ATXN3-228ENST00000554592 CCL18P55774 89 aa3.37□□□□□ -1.87
ATXN3-228ENST00000554592 CYCSP99999 105 aaKnown RBP3.37□□□□□ -1.87
ATXN3-228ENST00000554592 FGL1Q08830 312 aa3.37□□□□□ -1.87
ATXN3-228ENST00000554592 CATR1Q13166 79 aa3.37□□□□□ -1.87
ATXN3-228ENST00000554592 LGALSLQ3ZCW2 172 aaPredicted RBP3.37□□□□□ -1.87
ATXN3-228ENST00000554592 FAM222AQ5U5X8 452 aa3.37□□□□□ -1.87
ATXN3-228ENST00000554592 ZNF600Q6ZNG1 722 aa3.37□□□□□ -1.87
ATXN3-228ENST00000554592 SLC51BQ86UW2 128 aa3.37□□□□□ -1.87
ATXN3-228ENST00000554592 OR11H7Q8NGC8 314 aa3.37□□□□□ -1.87
ATXN3-228ENST00000554592 OR4A16Q8NH70 328 aa3.37□□□□□ -1.87
ATXN3-228ENST00000554592 DCANP1Q8TF63 244 aa3.37□□□□□ -1.87
ATXN3-228ENST00000554592 TMEM56Q96MV1 263 aa3.37□□□□□ -1.87
ATXN3-228ENST00000554592 SLC25A21Q9BQT8 299 aaPredicted RBP3.37□□□□□ -1.87
ATXN3-228ENST00000554592 C20orf85Q9H1P6 137 aa3.37□□□□□ -1.87
ATXN3-228ENST00000554592 AUNIPQ9H7T9 357 aa3.37□□□□□ -1.87
ATXN3-228ENST00000554592 CCL28Q9NRJ3 127 aa3.37□□□□□ -1.87
ATXN3-228ENST00000554592 FKBP11Q9NYL4 201 aa3.37□□□□□ -1.87
ATXN3-228ENST00000554592 OR51B2Q9Y5P1 312 aa3.37□□□□□ -1.87
ATXN3-228ENST00000554592 FAT1Q14517 4588 aa3.37□□□□□ -1.87
ATXN3-228ENST00000554592 AGRNO00468 2067 aa3.36□□□□□ -1.87
ATXN3-228ENST00000554592 TRAV6A0A075B6T7 132 aa3.36□□□□□ -1.87
ATXN3-228ENST00000554592 A0A0D9SG52 128 aa3.36□□□□□ -1.87
ATXN3-228ENST00000554592 HELTA6NFD8 242 aa3.36□□□□□ -1.87
ATXN3-228ENST00000554592 H3BMM0 161 aa3.36□□□□□ -1.87
ATXN3-228ENST00000554592 K7EQD1 137 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms