RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 DEFB130BP0DP73 79 aa13.26□□□□□ -0.29
CPSF2-203ENST00000554290 DEFB130AP0DP74 79 aa13.26□□□□□ -0.29
CPSF2-203ENST00000554290 FAM3BP58499 235 aaPredicted RBP13.26□□□□□ -0.29
CPSF2-203ENST00000554290 CNPY1Q3B7I2 92 aa13.26□□□□□ -0.29
CPSF2-203ENST00000554290 LINC01587Q99440 93 aa13.26□□□□□ -0.29
CPSF2-203ENST00000554290 ARV1Q9H2C2 271 aa13.26□□□□□ -0.29
CPSF2-203ENST00000554290 GSKIPQ9P0R6 139 aa13.26□□□□□ -0.29
CPSF2-203ENST00000554290 ZNF546Q86UE3 836 aa13.25□□□□□ -0.29
CPSF2-203ENST00000554290 ZBTB8BQ8NAP8 495 aaPredicted RBP13.25□□□□□ -0.29
CPSF2-203ENST00000554290 HERC2O95714 4834 aa13.24□□□□□ -0.29
CPSF2-203ENST00000554290 MED14OSP0DP75 135 aa13.24□□□□□ -0.29
CPSF2-203ENST00000554290 CXCL2P19875 107 aa13.24□□□□□ -0.29
CPSF2-203ENST00000554290 SLC38A11Q08AI6 406 aa13.24□□□□□ -0.29
CPSF2-203ENST00000554290 PATE2Q6UY27 113 aa13.24□□□□□ -0.29
CPSF2-203ENST00000554290 RPUSD4Q96CM3 377 aaKnown RBP13.24□□□□□ -0.29
CPSF2-203ENST00000554290 ATG101Q9BSB4 218 aa13.24□□□□□ -0.29
CPSF2-203ENST00000554290 GGACTQ9BVM4 153 aa13.24□□□□□ -0.29
CPSF2-203ENST00000554290 ATP5G1P05496 136 aa13.23□□□□□ -0.29
CPSF2-203ENST00000554290 AZU1P20160 251 aa13.23□□□□□ -0.29
CPSF2-203ENST00000554290 ATP5G3P48201 142 aa13.23□□□□□ -0.29
CPSF2-203ENST00000554290 TAS2R60P59551 318 aa13.23□□□□□ -0.29
CPSF2-203ENST00000554290 LCN15Q6UWW0 184 aa13.23□□□□□ -0.29
CPSF2-203ENST00000554290 MITD1Q8WV92 249 aa13.23□□□□□ -0.29
CPSF2-203ENST00000554290 CBY3A6NI87 242 aa13.22□□□□□ -0.29
CPSF2-203ENST00000554290 F5H768 121 aa13.22□□□□□ -0.29
CPSF2-203ENST00000554290 AGPAT2O15120 278 aa13.22□□□□□ -0.29
CPSF2-203ENST00000554290 HTN1P15515 57 aa13.22□□□□□ -0.29
CPSF2-203ENST00000554290 BTCP35070 178 aa13.22□□□□□ -0.29
CPSF2-203ENST00000554290 CDKN1BP46527 198 aa13.22□□□□□ -0.29
CPSF2-203ENST00000554290 C1orf134Q5TEV5 83 aa13.22□□□□□ -0.29
CPSF2-203ENST00000554290 LINC00305Q7Z4B0 112 aa13.22□□□□□ -0.29
CPSF2-203ENST00000554290 BPIFA4PQ86YQ2 179 aa13.22□□□□□ -0.29
CPSF2-203ENST00000554290 C16orf74Q96GX8 76 aa13.22□□□□□ -0.29
CPSF2-203ENST00000554290 SLC50A1Q9BRV3 221 aa13.22□□□□□ -0.29
CPSF2-203ENST00000554290 RCL1Q9Y2P8 373 aaKnown RBP13.22□□□□□ -0.29
CPSF2-203ENST00000554290 PLAC8L1A1L4L8 177 aa13.21□□□□□ -0.29
CPSF2-203ENST00000554290 C7orf66A4D0T2 115 aa13.21□□□□□ -0.29
CPSF2-203ENST00000554290 L7N2F9 121 aa13.21□□□□□ -0.29
CPSF2-203ENST00000554290 MRPS12O15235 138 aaKnown RBP13.21□□□□□ -0.29
CPSF2-203ENST00000554290 COX7A2P2O60397 106 aa13.21□□□□□ -0.29
CPSF2-203ENST00000554290 MBPP02686 304 aaPredicted RBP13.21□□□□□ -0.29
CPSF2-203ENST00000554290 VAMP2P63027 116 aa13.21□□□□□ -0.29
CPSF2-203ENST00000554290 ZNF846Q147U1 533 aa13.21□□□□□ -0.29
CPSF2-203ENST00000554290 ZNF493Q6ZR52 646 aa13.21□□□□□ -0.29
CPSF2-203ENST00000554290 SDHCQ99643 169 aaPredicted RBP13.21□□□□□ -0.29
CPSF2-203ENST00000554290 ZNF331Q9NQX6 463 aaPredicted RBP13.21□□□□□ -0.29
CPSF2-203ENST00000554290 TIMM8BQ9Y5J9 83 aaPredicted RBP13.21□□□□□ -0.29
CPSF2-203ENST00000554290 IL7P13232 177 aa13.2□□□□□ -0.3
CPSF2-203ENST00000554290 ARL16Q0P5N6 197 aa13.2□□□□□ -0.3
CPSF2-203ENST00000554290 RAB31Q13636 194 aa13.2□□□□□ -0.3
CPSF2-203ENST00000554290 FCN2Q15485 313 aa13.2□□□□□ -0.3
CPSF2-203ENST00000554290 H7BYZ3 331 aa13.19□□□□□ -0.3
CPSF2-203ENST00000554290 NUDT3O95989 172 aa13.19□□□□□ -0.3
CPSF2-203ENST00000554290 C10orf113Q5VZT2 155 aa13.19□□□□□ -0.3
CPSF2-203ENST00000554290 OR10J6PQ8NGY7 276 aa13.19□□□□□ -0.3
CPSF2-203ENST00000554290 C20orf144Q9BQM9 153 aa13.19□□□□□ -0.3
CPSF2-203ENST00000554290 Q6ZRG5 221 aa13.18□□□□□ -0.3
CPSF2-203ENST00000554290 C20orf85Q9H1P6 137 aa13.18□□□□□ -0.3
CPSF2-203ENST00000554290 PXMP4Q9Y6I8 212 aa13.18□□□□□ -0.3
CPSF2-203ENST00000554290 KIAA1109Q2LD37 5005 aa13.18□□□□□ -0.3
CPSF2-203ENST00000554290 SNRPCP09234 159 aaKnown RBP13.17□□□□□ -0.3
CPSF2-203ENST00000554290 PRB4P10163 310 aaPredicted RBP13.17□□□□□ -0.3
CPSF2-203ENST00000554290 CAMLGP49069 296 aa13.17□□□□□ -0.3
CPSF2-203ENST00000554290 BCAP31P51572 246 aa13.17□□□□□ -0.3
CPSF2-203ENST00000554290 CCL18P55774 89 aa13.17□□□□□ -0.3
CPSF2-203ENST00000554290 TMEM263Q8WUH6 116 aaKnown RBP13.17□□□□□ -0.3
CPSF2-203ENST00000554290 TMEM37Q8WXS4 190 aa13.17□□□□□ -0.3
CPSF2-203ENST00000554290 MGST2Q99735 147 aa13.17□□□□□ -0.3
CPSF2-203ENST00000554290 DNAJC4Q9NNZ3 241 aa13.17□□□□□ -0.3
CPSF2-203ENST00000554290 NOP10Q9NPE3 64 aaKnown RBP13.17□□□□□ -0.3
CPSF2-203ENST00000554290 FAM25EA8MYX2 175 aa13.16□□□□□ -0.3
CPSF2-203ENST00000554290 CCSO14618 274 aa13.16□□□□□ -0.3
CPSF2-203ENST00000554290 GUK1Q16774 197 aa13.16□□□□□ -0.3
CPSF2-203ENST00000554290 CCDC28AQ8IWP9 274 aa13.16□□□□□ -0.3
CPSF2-203ENST00000554290 RNASE8Q8TDE3 154 aaKnown RBP13.16□□□□□ -0.3
CPSF2-203ENST00000554290 LSM5Q9Y4Y9 91 aaKnown RBP13.16□□□□□ -0.3
CPSF2-203ENST00000554290 PLA2G10O15496 165 aa13.15□□□□□ -0.3
CPSF2-203ENST00000554290 LYRM1O43325 122 aa13.15□□□□□ -0.3
CPSF2-203ENST00000554290 CAV2P51636 162 aa13.15□□□□□ -0.3
CPSF2-203ENST00000554290 OPCMLQ14982 345 aa13.15□□□□□ -0.3
CPSF2-203ENST00000554290 NRARPQ7Z6K4 114 aa13.15□□□□□ -0.3
CPSF2-203ENST00000554290 NBDYA0A0U1RRE5 68 aa13.14□□□□□ -0.31
CPSF2-203ENST00000554290 C5orf51A6NDU8 294 aa13.14□□□□□ -0.31
CPSF2-203ENST00000554290 H3BTX0 84 aa13.14□□□□□ -0.31
CPSF2-203ENST00000554290 SLC17A3O00476 420 aa13.14□□□□□ -0.31
CPSF2-203ENST00000554290 CST7O76096 145 aa13.14□□□□□ -0.31
CPSF2-203ENST00000554290 TCRBP04435 133 aa13.14□□□□□ -0.31
CPSF2-203ENST00000554290 IGLC2P0DOY2 106 aa13.14□□□□□ -0.31
CPSF2-203ENST00000554290 PVALBP20472 110 aaPredicted RBP13.14□□□□□ -0.31
CPSF2-203ENST00000554290 CLINT1Q14677 625 aa13.14□□□□□ -0.31
CPSF2-203ENST00000554290 MORN5Q5VZ52 161 aa13.14□□□□□ -0.31
CPSF2-203ENST00000554290 OR1L4Q8NGR5 311 aa13.14□□□□□ -0.31
CPSF2-203ENST00000554290 ZNRF2Q8NHG8 242 aa13.14□□□□□ -0.31
CPSF2-203ENST00000554290 PFDN5Q99471 154 aa13.14□□□□□ -0.31
CPSF2-203ENST00000554290 UQCC1Q9NVA1 299 aa13.14□□□□□ -0.31
CPSF2-203ENST00000554290 NACAE9PAV3 2078 aa13.13□□□□□ -0.31
CPSF2-203ENST00000554290 PRAC2D3DTV9 90 aa13.13□□□□□ -0.31
CPSF2-203ENST00000554290 H3BQ15 152 aa13.13□□□□□ -0.31
CPSF2-203ENST00000554290 GFI1BQ5VTD9 330 aa13.13□□□□□ -0.31
CPSF2-203ENST00000554290 ZNF431Q8TF32 576 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms