RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 F6UZH7 168 aa5.81□□□□□ -1.48
TDP1-209ENST00000554180 CBLN1P23435 193 aa5.81□□□□□ -1.48
TDP1-209ENST00000554180 CD81P60033 236 aa5.81□□□□□ -1.48
TDP1-209ENST00000554180 UBE2G2P60604 165 aa5.81□□□□□ -1.48
TDP1-209ENST00000554180 SRSF3P84103 164 aaKnown RBP5.81□□□□□ -1.48
TDP1-209ENST00000554180 PSG9Q00887 426 aa5.81□□□□□ -1.48
TDP1-209ENST00000554180 CST9LP1Q5W188 147 aa5.81□□□□□ -1.48
TDP1-209ENST00000554180 CCDC28AQ8IWP9 274 aa5.81□□□□□ -1.48
TDP1-209ENST00000554180 ARL6IP6Q8N6S5 226 aa5.81□□□□□ -1.48
TDP1-209ENST00000554180 RXFP4Q8TDU9 374 aa5.81□□□□□ -1.48
TDP1-209ENST00000554180 DLX4Q92988 240 aaPredicted RBP5.81□□□□□ -1.48
TDP1-209ENST00000554180 C11orf52Q96A22 123 aa5.81□□□□□ -1.48
TDP1-209ENST00000554180 RPUSD4Q96CM3 377 aaKnown RBP5.81□□□□□ -1.48
TDP1-209ENST00000554180 DUX3Q96PT4 197 aa5.81□□□□□ -1.48
TDP1-209ENST00000554180 CITED4Q96RK1 184 aa5.81□□□□□ -1.48
TDP1-209ENST00000554180 RARRES2Q99969 163 aa5.81□□□□□ -1.48
TDP1-209ENST00000554180 SLC50A1Q9BRV3 221 aa5.81□□□□□ -1.48
TDP1-209ENST00000554180 TREM1Q9NP99 234 aa5.81□□□□□ -1.48
TDP1-209ENST00000554180 OTORQ9NRC9 128 aa5.81□□□□□ -1.48
TDP1-209ENST00000554180 SMAD5-AS1Q9Y6J3 95 aa5.81□□□□□ -1.48
TDP1-209ENST00000554180 IGHV3-49A0A0A0MS15 119 aa5.8□□□□□ -1.48
TDP1-209ENST00000554180 IGHV3-66A0A0C4DH42 116 aa5.8□□□□□ -1.48
TDP1-209ENST00000554180 TMEM218A2RU14 115 aa5.8□□□□□ -1.48
TDP1-209ENST00000554180 SLC17A3O00476 420 aa5.8□□□□□ -1.48
TDP1-209ENST00000554180 OVOL1O14753 267 aa5.8□□□□□ -1.48
TDP1-209ENST00000554180 ATP6V1G1O75348 118 aa5.8□□□□□ -1.48
TDP1-209ENST00000554180 NDUFB4O95168 129 aa5.8□□□□□ -1.48
TDP1-209ENST00000554180 SRP19P09132 144 aaKnown RBP5.8□□□□□ -1.48
TDP1-209ENST00000554180 SFTA3P0C7M3 94 aa5.8□□□□□ -1.48
TDP1-209ENST00000554180 FOLR2P14207 255 aa5.8□□□□□ -1.48
TDP1-209ENST00000554180 ATP5G3P48201 142 aa5.8□□□□□ -1.48
TDP1-209ENST00000554180 RANP62826 216 aaKnown RBP5.8□□□□□ -1.48
TDP1-209ENST00000554180 NSUN5P1Q3KNT7 163 aa5.8□□□□□ -1.48
TDP1-209ENST00000554180 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.8□□□□□ -1.48
TDP1-209ENST00000554180 C5orf17Q8NAS9 161 aa5.8□□□□□ -1.48
TDP1-209ENST00000554180 BLNKQ8WV28 456 aa5.8□□□□□ -1.48
TDP1-209ENST00000554180 HIST1H2BAQ96A08 127 aa5.8□□□□□ -1.48
TDP1-209ENST00000554180 ZNF747Q9BV97 191 aa5.8□□□□□ -1.48
TDP1-209ENST00000554180 SEC11CQ9BY50 192 aa5.8□□□□□ -1.48
TDP1-209ENST00000554180 Q9H3A6 140 aa5.8□□□□□ -1.48
TDP1-209ENST00000554180 AAMDCQ9H7C9 122 aa5.8□□□□□ -1.48
TDP1-209ENST00000554180 NRN1Q9NPD7 142 aa5.8□□□□□ -1.48
TDP1-209ENST00000554180 ZNF331Q9NQX6 463 aaPredicted RBP5.8□□□□□ -1.48
TDP1-209ENST00000554180 TRAV2A0A0B4J234 112 aa5.79□□□□□ -1.48
TDP1-209ENST00000554180 TRAV25A0A0B4J276 109 aa5.79□□□□□ -1.48
TDP1-209ENST00000554180 SERTM2A0A1B0GWG4 89 aa5.79□□□□□ -1.48
TDP1-209ENST00000554180 ZNF785A8K8V0 405 aa5.79□□□□□ -1.48
TDP1-209ENST00000554180 ISLRO14498 428 aa5.79□□□□□ -1.48
TDP1-209ENST00000554180 PF4P02776 101 aa5.79□□□□□ -1.48
TDP1-209ENST00000554180 CSN3P07498 182 aa5.79□□□□□ -1.48
TDP1-209ENST00000554180 S100A1P23297 94 aa5.79□□□□□ -1.48
TDP1-209ENST00000554180 SUMO1P63165 101 aaKnown RBP5.79□□□□□ -1.48
TDP1-209ENST00000554180 FAM74A3Q4VXF1 159 aa5.79□□□□□ -1.48
TDP1-209ENST00000554180 SOHLH1Q5JUK2 328 aa5.79□□□□□ -1.48
TDP1-209ENST00000554180 FAM90A2PQ658T7 463 aa5.79□□□□□ -1.48
TDP1-209ENST00000554180 HIST2H2BDQ6DRA6 164 aa5.79□□□□□ -1.48
TDP1-209ENST00000554180 TCF24Q7RTU0 167 aa5.79□□□□□ -1.48
TDP1-209ENST00000554180 CYB561D1Q8N8Q1 229 aa5.79□□□□□ -1.48
TDP1-209ENST00000554180 CMTM2Q8TAZ6 248 aa5.79□□□□□ -1.48
TDP1-209ENST00000554180 MRPL53Q96EL3 112 aaKnown RBP5.79□□□□□ -1.48
TDP1-209ENST00000554180 C17orf77Q96MU5 243 aa5.79□□□□□ -1.48
TDP1-209ENST00000554180 MLXQ9UH92 298 aa5.79□□□□□ -1.48
TDP1-209ENST00000554180 PRELID1Q9Y255 219 aa5.79□□□□□ -1.48
TDP1-209ENST00000554180 STAB1Q9NY15 2570 aa5.79□□□□□ -1.48
TDP1-209ENST00000554180 SCO2A0A1W2PP80 73 aa5.78□□□□□ -1.48
TDP1-209ENST00000554180 PGPA6NDG6 321 aa5.78□□□□□ -1.48
TDP1-209ENST00000554180 C9JQL5 133 aa5.78□□□□□ -1.48
TDP1-209ENST00000554180 H3BTX0 84 aa5.78□□□□□ -1.48
TDP1-209ENST00000554180 PEX7O00628 323 aa5.78□□□□□ -1.48
TDP1-209ENST00000554180 SOCS3O14543 225 aa5.78□□□□□ -1.48
TDP1-209ENST00000554180 SLC25A5P05141 298 aaKnown RBP5.78□□□□□ -1.48
TDP1-209ENST00000554180 CSN1S1P47710 185 aa5.78□□□□□ -1.48
TDP1-209ENST00000554180 C10orf91Q5T1B1 145 aa5.78□□□□□ -1.48
TDP1-209ENST00000554180 SHISA2Q6UWI4 295 aa5.78□□□□□ -1.48
TDP1-209ENST00000554180 ADAMTSL5Q6ZMM2 481 aa5.78□□□□□ -1.48
TDP1-209ENST00000554180 LINC00482Q8N8I6 264 aa5.78□□□□□ -1.48
TDP1-209ENST00000554180 OR2K2Q8NGT1 345 aa5.78□□□□□ -1.48
TDP1-209ENST00000554180 DYNLRB2Q8TF09 96 aa5.78□□□□□ -1.48
TDP1-209ENST00000554180 C2CD4CQ8TF44 421 aa5.78□□□□□ -1.48
TDP1-209ENST00000554180 ATG101Q9BSB4 218 aa5.78□□□□□ -1.48
TDP1-209ENST00000554180 EPDR1Q9UM22 224 aa5.78□□□□□ -1.48
TDP1-209ENST00000554180 CARHSP1Q9Y2V2 147 aaKnown RBP5.78□□□□□ -1.48
TDP1-209ENST00000554180 FBLL1A6NHQ2 334 aaKnown RBP5.77□□□□□ -1.49
TDP1-209ENST00000554180 F8W036 122 aa5.77□□□□□ -1.49
TDP1-209ENST00000554180 K7EQM0 130 aa5.77□□□□□ -1.49
TDP1-209ENST00000554180 TSPAN4O14817 238 aa5.77□□□□□ -1.49
TDP1-209ENST00000554180 TCRAP04437 139 aa5.77□□□□□ -1.49
TDP1-209ENST00000554180 S100A9P06702 114 aaKnown RBP5.77□□□□□ -1.49
TDP1-209ENST00000554180 SNRPCP09234 159 aaKnown RBP5.77□□□□□ -1.49
TDP1-209ENST00000554180 ADCYAP1P18509 176 aa5.77□□□□□ -1.49
TDP1-209ENST00000554180 EDN2P20800 178 aa5.77□□□□□ -1.49
TDP1-209ENST00000554180 ID1P41134 155 aa5.77□□□□□ -1.49
TDP1-209ENST00000554180 AKR1C3P42330 323 aa5.77□□□□□ -1.49
TDP1-209ENST00000554180 INSL3P51460 131 aa5.77□□□□□ -1.49
TDP1-209ENST00000554180 CNN1P51911 297 aaKnown RBP5.77□□□□□ -1.49
TDP1-209ENST00000554180 RPL11P62913 178 aaKnown RBP5.77□□□□□ -1.49
TDP1-209ENST00000554180 PAFAH1B2P68402 229 aa5.77□□□□□ -1.49
TDP1-209ENST00000554180 DEFB114Q30KQ6 69 aa5.77□□□□□ -1.49
TDP1-209ENST00000554180 C12orf54Q6X4T0 127 aa5.77□□□□□ -1.49
TDP1-209ENST00000554180 EXOC3-AS1Q8N2X6 119 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms