RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 ICOSQ9Y6W8 199 aa4.55□□□□□ -1.68
ATXN3-224ENST00000554040 TRAV8-2A0A0B4J237 113 aa4.54□□□□□ -1.68
ATXN3-224ENST00000554040 SNRPGP15A8MWD9 76 aa4.54□□□□□ -1.68
ATXN3-224ENST00000554040 ZNF324O75467 553 aaPredicted RBP4.54□□□□□ -1.68
ATXN3-224ENST00000554040 CDKN1BP46527 198 aa4.54□□□□□ -1.68
ATXN3-224ENST00000554040 AKR1C2P52895 323 aa4.54□□□□□ -1.68
ATXN3-224ENST00000554040 TAS2R46P59540 309 aa4.54□□□□□ -1.68
ATXN3-224ENST00000554040 LYZP61626 148 aa4.54□□□□□ -1.68
ATXN3-224ENST00000554040 ZNF90Q03938 601 aa4.54□□□□□ -1.68
ATXN3-224ENST00000554040 DAZ2Q13117 558 aaKnown RBP4.54□□□□□ -1.68
ATXN3-224ENST00000554040 AARDQ4LEZ3 155 aa4.54□□□□□ -1.68
ATXN3-224ENST00000554040 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.54□□□□□ -1.68
ATXN3-224ENST00000554040 C10orf126Q8N4M7 172 aa4.54□□□□□ -1.68
ATXN3-224ENST00000554040 HEYLQ9NQ87 328 aaPredicted RBP4.54□□□□□ -1.68
ATXN3-224ENST00000554040 NDUFB11Q9NX14 153 aa4.54□□□□□ -1.68
ATXN3-224ENST00000554040 PPP1R14DQ9NXH3 145 aa4.54□□□□□ -1.68
ATXN3-224ENST00000554040 MUC2Q02817 5179 aa4.54□□□□□ -1.68
ATXN3-224ENST00000554040 TRGV2A0A075B6R0 118 aa4.53□□□□□ -1.68
ATXN3-224ENST00000554040 IGKV1D-37A0A075B6S9 117 aa4.53□□□□□ -1.68
ATXN3-224ENST00000554040 A0A0G2JRQ6 117 aa4.53□□□□□ -1.68
ATXN3-224ENST00000554040 ZFP92A6NM28 416 aa4.53□□□□□ -1.68
ATXN3-224ENST00000554040 SNURFLB1AK76 121 aa4.53□□□□□ -1.68
ATXN3-224ENST00000554040 RS1O15537 224 aa4.53□□□□□ -1.68
ATXN3-224ENST00000554040 CRYGDP07320 174 aa4.53□□□□□ -1.68
ATXN3-224ENST00000554040 HRH1P35367 487 aa4.53□□□□□ -1.68
ATXN3-224ENST00000554040 TSPAN5P62079 268 aa4.53□□□□□ -1.68
ATXN3-224ENST00000554040 HIST1H1AQ02539 215 aaPredicted RBP4.53□□□□□ -1.68
ATXN3-224ENST00000554040 Q6ZTI0 123 aa4.53□□□□□ -1.68
ATXN3-224ENST00000554040 SCXQ7RTU7 201 aa4.53□□□□□ -1.68
ATXN3-224ENST00000554040 PRSS48Q7RTY5 328 aa4.53□□□□□ -1.68
ATXN3-224ENST00000554040 NOXA1Q86UR1 476 aa4.53□□□□□ -1.68
ATXN3-224ENST00000554040 SPARTQ8N0X7 666 aa4.53□□□□□ -1.68
ATXN3-224ENST00000554040 RNF182Q8N6D2 247 aa4.53□□□□□ -1.68
ATXN3-224ENST00000554040 ZNF738Q8NE65 137 aa4.53□□□□□ -1.68
ATXN3-224ENST00000554040 OR8A1Q8NGG7 326 aa4.53□□□□□ -1.68
ATXN3-224ENST00000554040 PRSS3P2Q8NHM4 247 aa4.53□□□□□ -1.68
ATXN3-224ENST00000554040 TP53RKQ96S44 253 aa4.53□□□□□ -1.68
ATXN3-224ENST00000554040 C20orf144Q9BQM9 153 aa4.53□□□□□ -1.68
ATXN3-224ENST00000554040 SLC25A32Q9H2D1 315 aa4.53□□□□□ -1.68
ATXN3-224ENST00000554040 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.53□□□□□ -1.68
ATXN3-224ENST00000554040 TRAV5A0A0B4J249 113 aa4.52□□□□□ -1.69
ATXN3-224ENST00000554040 OR5AC1P0C628 307 aa4.52□□□□□ -1.69
ATXN3-224ENST00000554040 HLA-DMAP28067 261 aa4.52□□□□□ -1.69
ATXN3-224ENST00000554040 RND3P61587 244 aa4.52□□□□□ -1.69
ATXN3-224ENST00000554040 MRPL23Q16540 153 aaKnown RBP4.52□□□□□ -1.69
ATXN3-224ENST00000554040 PSG3Q16557 428 aa4.52□□□□□ -1.69
ATXN3-224ENST00000554040 NMSQ5H8A3 153 aa4.52□□□□□ -1.69
ATXN3-224ENST00000554040 NEGR1Q7Z3B1 354 aa4.52□□□□□ -1.69
ATXN3-224ENST00000554040 WFDC10BQ8IUB3 73 aa4.52□□□□□ -1.69
ATXN3-224ENST00000554040 LRTM2Q8N967 370 aa4.52□□□□□ -1.69
ATXN3-224ENST00000554040 OR4D5Q8NGN0 318 aa4.52□□□□□ -1.69
ATXN3-224ENST00000554040 OR1B1Q8NGR6 318 aa4.52□□□□□ -1.69
ATXN3-224ENST00000554040 CHAC1Q9BUX1 264 aa4.52□□□□□ -1.69
ATXN3-224ENST00000554040 SLC25A22Q9H936 323 aa4.52□□□□□ -1.69
ATXN3-224ENST00000554040 TXNL4BQ9NX01 149 aaKnown RBP4.52□□□□□ -1.69
ATXN3-224ENST00000554040 C3orf85A0A1B0GTC6 90 aa4.51□□□□□ -1.69
ATXN3-224ENST00000554040 CEBPZOSA8MTT3 80 aa4.51□□□□□ -1.69
ATXN3-224ENST00000554040 PRAF2O60831 178 aa4.51□□□□□ -1.69
ATXN3-224ENST00000554040 FABP1P07148 127 aa4.51□□□□□ -1.69
ATXN3-224ENST00000554040 PRB4P10163 310 aaPredicted RBP4.51□□□□□ -1.69
ATXN3-224ENST00000554040 GPX4P36969 197 aaPredicted RBP4.51□□□□□ -1.69
ATXN3-224ENST00000554040 PIGPP57054 158 aa4.51□□□□□ -1.69
ATXN3-224ENST00000554040 TIRAPP58753 221 aa4.51□□□□□ -1.69
ATXN3-224ENST00000554040 FGL1Q08830 312 aa4.51□□□□□ -1.69
ATXN3-224ENST00000554040 SLAQ13239 276 aa4.51□□□□□ -1.69
ATXN3-224ENST00000554040 OR2F1Q13607 317 aa4.51□□□□□ -1.69
ATXN3-224ENST00000554040 TRIM16LQ309B1 348 aa4.51□□□□□ -1.69
ATXN3-224ENST00000554040 C10orf25Q5T742 122 aa4.51□□□□□ -1.69
ATXN3-224ENST00000554040 FAM219AQ8IW50 185 aa4.51□□□□□ -1.69
ATXN3-224ENST00000554040 ARRDC1Q8N5I2 433 aa4.51□□□□□ -1.69
ATXN3-224ENST00000554040 ZNF486Q96H40 463 aaPredicted RBP4.51□□□□□ -1.69
ATXN3-224ENST00000554040 GPR82Q96P67 336 aa4.51□□□□□ -1.69
ATXN3-224ENST00000554040 PRO0255Q9UI72 69 aa4.51□□□□□ -1.69
ATXN3-224ENST00000554040 U3KQ87 197 aa4.51□□□□□ -1.69
ATXN3-224ENST00000554040 TRGV1A0A0A0MS02 117 aa4.5□□□□□ -1.69
ATXN3-224ENST00000554040 GABARAPH6UMI1 98 aa4.5□□□□□ -1.69
ATXN3-224ENST00000554040 GABARAPO95166 117 aa4.5□□□□□ -1.69
ATXN3-224ENST00000554040 CFDP00746 253 aaPredicted RBP4.5□□□□□ -1.69
ATXN3-224ENST00000554040 IGLV2-8P01709 118 aa4.5□□□□□ -1.69
ATXN3-224ENST00000554040 PGAM2P15259 253 aa4.5□□□□□ -1.69
ATXN3-224ENST00000554040 CXCL3P19876 107 aa4.5□□□□□ -1.69
ATXN3-224ENST00000554040 SDC2P34741 201 aa4.5□□□□□ -1.69
ATXN3-224ENST00000554040 PRSS3P35030 304 aa4.5□□□□□ -1.69
ATXN3-224ENST00000554040 HNRNPA3P51991 378 aaKnown RBP4.5□□□□□ -1.69
ATXN3-224ENST00000554040 CRYBA4P53673 196 aa4.5□□□□□ -1.69
ATXN3-224ENST00000554040 ASAH1Q13510 395 aa4.5□□□□□ -1.69
ATXN3-224ENST00000554040 ACOT6Q3I5F7 207 aaPredicted RBP4.5□□□□□ -1.69
ATXN3-224ENST00000554040 SP6Q3SY56 376 aa4.5□□□□□ -1.69
ATXN3-224ENST00000554040 GFI1BQ5VTD9 330 aa4.5□□□□□ -1.69
ATXN3-224ENST00000554040 RNASE11Q8TAA1 199 aaKnown RBP4.5□□□□□ -1.69
ATXN3-224ENST00000554040 CIRBP-AS1Q8TBR5 109 aa4.5□□□□□ -1.69
ATXN3-224ENST00000554040 IL22RA2Q969J5 263 aa4.5□□□□□ -1.69
ATXN3-224ENST00000554040 TRIM63Q969Q1 353 aa4.5□□□□□ -1.69
ATXN3-224ENST00000554040 S100A16Q96FQ6 103 aaKnown RBP4.5□□□□□ -1.69
ATXN3-224ENST00000554040 TRGV9Q99603 122 aa4.5□□□□□ -1.69
ATXN3-224ENST00000554040 CACNG5Q9UF02 275 aa4.5□□□□□ -1.69
ATXN3-224ENST00000554040 HHLA3Q9XRX5 114 aa4.5□□□□□ -1.69
ATXN3-224ENST00000554040 FUT9Q9Y231 359 aa4.5□□□□□ -1.69
ATXN3-224ENST00000554040 RCL1Q9Y2P8 373 aaKnown RBP4.5□□□□□ -1.69
ATXN3-224ENST00000554040 LPAP08519 4548 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms