RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 TSPAN4O14817 238 aa10.97□□□□□ -0.65
SHMT2-210ENST00000553950 PRR31Q5SQ13 230 aa10.97□□□□□ -0.65
SHMT2-210ENST00000553950 FAM90A2PQ658T7 463 aa10.97□□□□□ -0.65
SHMT2-210ENST00000553950 SPATA3Q8NHX4 192 aa10.97□□□□□ -0.65
SHMT2-210ENST00000553950 MDFIQ99750 246 aa10.97□□□□□ -0.65
SHMT2-210ENST00000553950 FBN1P35555 2871 aaKnown RBP10.96□□□□□ -0.65
SHMT2-210ENST00000553950 OR4C46A6NHA9 309 aa10.96□□□□□ -0.65
SHMT2-210ENST00000553950 DNASE2O00115 360 aaPredicted RBP10.96□□□□□ -0.65
SHMT2-210ENST00000553950 IGLV1-51P01701 117 aa10.96□□□□□ -0.65
SHMT2-210ENST00000553950 ID1P41134 155 aa10.96□□□□□ -0.65
SHMT2-210ENST00000553950 DEFB114Q30KQ6 69 aa10.96□□□□□ -0.65
SHMT2-210ENST00000553950 ZNF503Q96F45 646 aa10.96□□□□□ -0.65
SHMT2-210ENST00000553950 GNG13Q9P2W3 67 aa10.96□□□□□ -0.65
SHMT2-210ENST00000553950 ZMAT5Q9UDW3 170 aaKnown RBP10.96□□□□□ -0.65
SHMT2-210ENST00000553950 PRELID1Q9Y255 219 aa10.96□□□□□ -0.65
SHMT2-210ENST00000553950 TENM1Q9UKZ4 2725 aa10.96□□□□□ -0.66
SHMT2-210ENST00000553950 STAB1Q9NY15 2570 aa10.95□□□□□ -0.66
SHMT2-210ENST00000553950 A0A1B0GV50 99 aa10.95□□□□□ -0.66
SHMT2-210ENST00000553950 ISLRO14498 428 aa10.95□□□□□ -0.66
SHMT2-210ENST00000553950 SNRPD3P62318 126 aaKnown RBP10.95□□□□□ -0.66
SHMT2-210ENST00000553950 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.95□□□□□ -0.66
SHMT2-210ENST00000553950 ADAMTSL5Q6ZMM2 481 aa10.95□□□□□ -0.66
SHMT2-210ENST00000553950 TMEM61Q8N0U2 210 aa10.95□□□□□ -0.66
SHMT2-210ENST00000553950 BLNKQ8WV28 456 aa10.95□□□□□ -0.66
SHMT2-210ENST00000553950 ZNF586Q9NXT0 402 aa10.95□□□□□ -0.66
SHMT2-210ENST00000553950 WIPF1O43516 503 aa10.94□□□□□ -0.66
SHMT2-210ENST00000553950 NDUFS6O75380 124 aaKnown RBP10.94□□□□□ -0.66
SHMT2-210ENST00000553950 BCL2P10415 239 aa10.94□□□□□ -0.66
SHMT2-210ENST00000553950 EDN2P20800 178 aa10.94□□□□□ -0.66
SHMT2-210ENST00000553950 CD300EQ496F6 205 aaPredicted RBP10.94□□□□□ -0.66
SHMT2-210ENST00000553950 ARL6IP6Q8N6S5 226 aa10.94□□□□□ -0.66
SHMT2-210ENST00000553950 MRPL53Q96EL3 112 aaKnown RBP10.94□□□□□ -0.66
SHMT2-210ENST00000553950 C16orf92Q96LL3 132 aa10.94□□□□□ -0.66
SHMT2-210ENST00000553950 MS4A6AQ9H2W1 248 aa10.94□□□□□ -0.66
SHMT2-210ENST00000553950 ZNF331Q9NQX6 463 aaPredicted RBP10.94□□□□□ -0.66
SHMT2-210ENST00000553950 OTORQ9NRC9 128 aa10.94□□□□□ -0.66
SHMT2-210ENST00000553950 MED9Q9NWA0 146 aa10.94□□□□□ -0.66
SHMT2-210ENST00000553950 H3BQ15 152 aa10.93□□□□□ -0.66
SHMT2-210ENST00000553950 EIF3GO75821 320 aaKnown RBP eCLIP10.93□□□□□ -0.66
SHMT2-210ENST00000553950 CMC4P56277 68 aaPredicted RBP10.93□□□□□ -0.66
SHMT2-210ENST00000553950 CMTM2Q8TAZ6 248 aa10.93□□□□□ -0.66
SHMT2-210ENST00000553950 RXFP4Q8TDU9 374 aa10.93□□□□□ -0.66
SHMT2-210ENST00000553950 FAM210AQ96ND0 272 aa10.93□□□□□ -0.66
SHMT2-210ENST00000553950 SMDT1Q9H4I9 107 aa10.93□□□□□ -0.66
SHMT2-210ENST00000553950 VAX2Q9UIW0 290 aa10.93□□□□□ -0.66
SHMT2-210ENST00000553950 SMAD5-AS1Q9Y6J3 95 aa10.93□□□□□ -0.66
SHMT2-210ENST00000553950 SERTM2A0A1B0GWG4 89 aa10.92□□□□□ -0.66
SHMT2-210ENST00000553950 FAM74A7A6NL05 159 aa10.92□□□□□ -0.66
SHMT2-210ENST00000553950 K7EQG2 157 aa10.92□□□□□ -0.66
SHMT2-210ENST00000553950 CSN1S1P47710 185 aa10.92□□□□□ -0.66
SHMT2-210ENST00000553950 MEF2BQ02080 365 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-210ENST00000553950 CST9LP1Q5W188 147 aa10.92□□□□□ -0.66
SHMT2-210ENST00000553950 C5orf17Q8NAS9 161 aa10.92□□□□□ -0.66
SHMT2-210ENST00000553950 DCANP1Q8TF63 244 aa10.92□□□□□ -0.66
SHMT2-210ENST00000553950 Q9H3A6 140 aa10.92□□□□□ -0.66
SHMT2-210ENST00000553950 TMPRSS5Q9H3S3 457 aa10.92□□□□□ -0.66
SHMT2-210ENST00000553950 IGKV3-7A0A075B6H7 116 aa10.91□□□□□ -0.66
SHMT2-210ENST00000553950 LOC102723971A0A1B0GUV8 181 aa10.91□□□□□ -0.66
SHMT2-210ENST00000553950 RAB19A4D1S5 217 aa10.91□□□□□ -0.66
SHMT2-210ENST00000553950 RBFOX3A6NFN3 312 aa10.91□□□□□ -0.66
SHMT2-210ENST00000553950 C11orf94C9JXX5 98 aa10.91□□□□□ -0.66
SHMT2-210ENST00000553950 F6UZH7 168 aa10.91□□□□□ -0.66
SHMT2-210ENST00000553950 SOCS3O14543 225 aa10.91□□□□□ -0.66
SHMT2-210ENST00000553950 PDE6DO43924 150 aa10.91□□□□□ -0.66
SHMT2-210ENST00000553950 PAGE4O60829 102 aa10.91□□□□□ -0.66
SHMT2-210ENST00000553950 UBE2G2P60604 165 aa10.91□□□□□ -0.66
SHMT2-210ENST00000553950 RANP62826 216 aaKnown RBP10.91□□□□□ -0.66
SHMT2-210ENST00000553950 GUCA2BQ16661 112 aa10.91□□□□□ -0.66
SHMT2-210ENST00000553950 NDUFA5Q16718 116 aa10.91□□□□□ -0.66
SHMT2-210ENST00000553950 ZNF506Q5JVG8 444 aa10.91□□□□□ -0.66
SHMT2-210ENST00000553950 PCNPQ8WW12 178 aaKnown RBP10.91□□□□□ -0.66
SHMT2-210ENST00000553950 EIF5A2Q9GZV4 153 aaKnown RBP10.91□□□□□ -0.66
SHMT2-210ENST00000553950 K7EQM0 130 aa10.9□□□□□ -0.66
SHMT2-210ENST00000553950 SLC17A3O00476 420 aa10.9□□□□□ -0.66
SHMT2-210ENST00000553950 NDUFB4O95168 129 aa10.9□□□□□ -0.66
SHMT2-210ENST00000553950 PEA15Q15121 130 aa10.9□□□□□ -0.66
SHMT2-210ENST00000553950 TOR2AQ5JU69 321 aa10.9□□□□□ -0.66
SHMT2-210ENST00000553950 HIST1H2BAQ96A08 127 aa10.9□□□□□ -0.66
SHMT2-210ENST00000553950 RPUSD4Q96CM3 377 aaKnown RBP10.9□□□□□ -0.66
SHMT2-210ENST00000553950 FAM110AQ9BQ89 295 aa10.9□□□□□ -0.66
SHMT2-210ENST00000553950 LINC00862A6NCI5 91 aa10.89□□□□□ -0.67
SHMT2-210ENST00000553950 FBLL1A6NHQ2 334 aaKnown RBP10.89□□□□□ -0.67
SHMT2-210ENST00000553950 GGTLC3B5MD39 225 aa10.89□□□□□ -0.67
SHMT2-210ENST00000553950 SLC25A5P05141 298 aaKnown RBP10.89□□□□□ -0.67
SHMT2-210ENST00000553950 CCL20P78556 96 aa10.89□□□□□ -0.67
SHMT2-210ENST00000553950 ICAM4Q14773 271 aa10.89□□□□□ -0.67
SHMT2-210ENST00000553950 HAGHQ16775 308 aa10.89□□□□□ -0.67
SHMT2-210ENST00000553950 UQCC3Q6UW78 93 aa10.89□□□□□ -0.67
SHMT2-210ENST00000553950 GTSCR1Q86UQ5 136 aa10.89□□□□□ -0.67
SHMT2-210ENST00000553950 GBGT1Q8N5D6 347 aa10.89□□□□□ -0.67
SHMT2-210ENST00000553950 YTHDF2Q9Y5A9 579 aaKnown RBP10.89□□□□□ -0.67
SHMT2-210ENST00000553950 ANK2Q01484 3957 aa10.89□□□□□ -0.67
SHMT2-210ENST00000553950 PGPA6NDG6 321 aa10.88□□□□□ -0.67
SHMT2-210ENST00000553950 TMEM250H0YL14 139 aa10.88□□□□□ -0.67
SHMT2-210ENST00000553950 H3BTX0 84 aa10.88□□□□□ -0.67
SHMT2-210ENST00000553950 IGLL1P15814 213 aa10.88□□□□□ -0.67
SHMT2-210ENST00000553950 TFPI2P48307 235 aa10.88□□□□□ -0.67
SHMT2-210ENST00000553950 PSG3Q16557 428 aa10.88□□□□□ -0.67
SHMT2-210ENST00000553950 ZNF738Q8NE65 137 aa10.88□□□□□ -0.67
SHMT2-210ENST00000553950 C17orf77Q96MU5 243 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms