RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 ISLRO14498 428 aa9.12□□□□□ -0.95
SHMT2-209ENST00000553949 ZNF688P0C7X2 276 aa9.12□□□□□ -0.95
SHMT2-209ENST00000553949 STAG3L2P0CL84 134 aa9.12□□□□□ -0.95
SHMT2-209ENST00000553949 STAG3L3P0CL85 134 aa9.12□□□□□ -0.95
SHMT2-209ENST00000553949 ID1P41134 155 aa9.12□□□□□ -0.95
SHMT2-209ENST00000553949 PSMB3P49720 205 aa9.12□□□□□ -0.95
SHMT2-209ENST00000553949 FHITP49789 147 aa9.12□□□□□ -0.95
SHMT2-209ENST00000553949 CMC4P56277 68 aaPredicted RBP9.12□□□□□ -0.95
SHMT2-209ENST00000553949 GUK1Q16774 197 aa9.12□□□□□ -0.95
SHMT2-209ENST00000553949 ODF3L2Q3SX64 289 aa9.12□□□□□ -0.95
SHMT2-209ENST00000553949 LCN15Q6UWW0 184 aa9.12□□□□□ -0.95
SHMT2-209ENST00000553949 PQLC2Q6ZP29 291 aa9.12□□□□□ -0.95
SHMT2-209ENST00000553949 SSX7Q7RTT5 188 aa9.12□□□□□ -0.95
SHMT2-209ENST00000553949 RNF141Q8WVD5 230 aa9.12□□□□□ -0.95
SHMT2-209ENST00000553949 C16orf92Q96LL3 132 aa9.12□□□□□ -0.95
SHMT2-209ENST00000553949 FAM110AQ9BQ89 295 aa9.12□□□□□ -0.95
SHMT2-209ENST00000553949 MAP6D1Q9H9H5 199 aa9.12□□□□□ -0.95
SHMT2-209ENST00000553949 C19orf73Q9NVV2 129 aa9.12□□□□□ -0.95
SHMT2-209ENST00000553949 UBQLN2Q9UHD9 624 aa9.12□□□□□ -0.95
SHMT2-209ENST00000553949 TRBV19A0A075B6N1 114 aa9.11□□□□□ -0.95
SHMT2-209ENST00000553949 TRAV8-2A0A0B4J237 113 aa9.11□□□□□ -0.95
SHMT2-209ENST00000553949 OR11H12B2RN74 326 aa9.11□□□□□ -0.95
SHMT2-209ENST00000553949 OR10J4P0C629 311 aa9.11□□□□□ -0.95
SHMT2-209ENST00000553949 ARL14EPLP0DKL9 152 aa9.11□□□□□ -0.95
SHMT2-209ENST00000553949 DEFB131AP59861 70 aa9.11□□□□□ -0.95
SHMT2-209ENST00000553949 SNRPD3P62318 126 aaKnown RBP9.11□□□□□ -0.95
SHMT2-209ENST00000553949 UBE2L3P68036 154 aaKnown RBP9.11□□□□□ -0.95
SHMT2-209ENST00000553949 IGFL4Q6B9Z1 124 aa9.11□□□□□ -0.95
SHMT2-209ENST00000553949 DPPA3Q6W0C5 159 aa9.11□□□□□ -0.95
SHMT2-209ENST00000553949 FAM213BQ8TBF2 198 aa9.11□□□□□ -0.95
SHMT2-209ENST00000553949 LRRC20Q8TCA0 184 aa9.11□□□□□ -0.95
SHMT2-209ENST00000553949 BLNKQ8WV28 456 aa9.11□□□□□ -0.95
SHMT2-209ENST00000553949 SAT2Q96F10 170 aaPredicted RBP9.11□□□□□ -0.95
SHMT2-209ENST00000553949 PHYHIPLQ96FC7 376 aa9.11□□□□□ -0.95
SHMT2-209ENST00000553949 LINC00052Q96N35 136 aa9.11□□□□□ -0.95
SHMT2-209ENST00000553949 SLC50A1Q9BRV3 221 aa9.11□□□□□ -0.95
SHMT2-209ENST00000553949 K7EIL1 84 aa9.1□□□□□ -0.95
SHMT2-209ENST00000553949 SLC17A3O00476 420 aa9.1□□□□□ -0.95
SHMT2-209ENST00000553949 ZNF253O75346 499 aa9.1□□□□□ -0.95
SHMT2-209ENST00000553949 CXorf1O96002 111 aa9.1□□□□□ -0.95
SHMT2-209ENST00000553949 NBEAP1P0C6P0 100 aa9.1□□□□□ -0.95
SHMT2-209ENST00000553949 SULT1A2P50226 295 aa9.1□□□□□ -0.95
SHMT2-209ENST00000553949 RAB5CP51148 216 aa9.1□□□□□ -0.95
SHMT2-209ENST00000553949 PSMG4Q5JS54 123 aa9.1□□□□□ -0.95
SHMT2-209ENST00000553949 APRG1Q8IVJ8 170 aa9.1□□□□□ -0.95
SHMT2-209ENST00000553949 DEFB125Q8N687 156 aa9.1□□□□□ -0.95
SHMT2-209ENST00000553949 C20orf173Q96LM9 149 aa9.1□□□□□ -0.95
SHMT2-209ENST00000553949 WFDC10AQ9H1F0 79 aa9.1□□□□□ -0.95
SHMT2-209ENST00000553949 ZNF331Q9NQX6 463 aaPredicted RBP9.1□□□□□ -0.95
SHMT2-209ENST00000553949 MAP1LC3B2A6NCE7 125 aa9.09□□□□□ -0.95
SHMT2-209ENST00000553949 NDUFB4O95168 129 aa9.09□□□□□ -0.95
SHMT2-209ENST00000553949 GCHFRP30047 84 aa9.09□□□□□ -0.95
SHMT2-209ENST00000553949 PDE6HQ13956 83 aa9.09□□□□□ -0.95
SHMT2-209ENST00000553949 ZNF124Q15973 351 aa9.09□□□□□ -0.95
SHMT2-209ENST00000553949 FAM74A1Q5RGS3 127 aa9.09□□□□□ -0.95
SHMT2-209ENST00000553949 ALKAL2Q6UX46 152 aa9.09□□□□□ -0.95
SHMT2-209ENST00000553949 RNF182Q8N6D2 247 aa9.09□□□□□ -0.95
SHMT2-209ENST00000553949 MAP1LC3BQ9GZQ8 125 aa9.09□□□□□ -0.95
SHMT2-209ENST00000553949 SORL1Q92673 2214 aa9.09□□□□□ -0.95
SHMT2-209ENST00000553949 HLA-DMBP28068 263 aa9.08□□□□□ -0.96
SHMT2-209ENST00000553949 FGF8P55075 233 aaPredicted RBP9.08□□□□□ -0.96
SHMT2-209ENST00000553949 PSG9Q00887 426 aa9.08□□□□□ -0.96
SHMT2-209ENST00000553949 DEFA6Q01524 100 aa9.08□□□□□ -0.96
SHMT2-209ENST00000553949 IQCF2Q8IXL9 164 aa9.08□□□□□ -0.96
SHMT2-209ENST00000553949 SFT2D1Q8WV19 159 aa9.08□□□□□ -0.96
SHMT2-209ENST00000553949 MBD3L1Q8WWY6 194 aa9.08□□□□□ -0.96
SHMT2-209ENST00000553949 H2AFB1P0C5Y9 115 aa9.07□□□□□ -0.96
SHMT2-209ENST00000553949 IGHV4-30-4P0DP06 118 aa9.07□□□□□ -0.96
SHMT2-209ENST00000553949 RANP62826 216 aaKnown RBP9.07□□□□□ -0.96
SHMT2-209ENST00000553949 EXOC3-AS1Q8N2X6 119 aa9.07□□□□□ -0.96
SHMT2-209ENST00000553949 SUN5Q8TC36 379 aa9.07□□□□□ -0.96
SHMT2-209ENST00000553949 CITED4Q96RK1 184 aa9.07□□□□□ -0.96
SHMT2-209ENST00000553949 TUBA4BQ9H853 241 aa9.07□□□□□ -0.96
SHMT2-209ENST00000553949 SRD5A3Q9H8P0 318 aa9.07□□□□□ -0.96
SHMT2-209ENST00000553949 TMEM167BQ9NRX6 74 aa9.07□□□□□ -0.96
SHMT2-209ENST00000553949 CLEC5AQ9NY25 188 aa9.07□□□□□ -0.96
SHMT2-209ENST00000553949 KNCNA6PVL3 124 aa9.06□□□□□ -0.96
SHMT2-209ENST00000553949 ZNF705EA8MWA4 302 aaPredicted RBP9.06□□□□□ -0.96
SHMT2-209ENST00000553949 A8MZ25 164 aa9.06□□□□□ -0.96
SHMT2-209ENST00000553949 DEFB1P60022 68 aa9.06□□□□□ -0.96
SHMT2-209ENST00000553949 PSG3Q16557 428 aa9.06□□□□□ -0.96
SHMT2-209ENST00000553949 ACTL10Q5JWF8 245 aa9.06□□□□□ -0.96
SHMT2-209ENST00000553949 LYPD1Q8N2G4 141 aa9.06□□□□□ -0.96
SHMT2-209ENST00000553949 ZNF738Q8NE65 137 aa9.06□□□□□ -0.96
SHMT2-209ENST00000553949 MRAPQ8TCY5 172 aa9.06□□□□□ -0.96
SHMT2-209ENST00000553949 TMPRSS5Q9H3S3 457 aa9.06□□□□□ -0.96
SHMT2-209ENST00000553949 AAMDCQ9H7C9 122 aa9.06□□□□□ -0.96
SHMT2-209ENST00000553949 A0A1B0GV50 99 aa9.05□□□□□ -0.96
SHMT2-209ENST00000553949 F6UB75 175 aa9.05□□□□□ -0.96
SHMT2-209ENST00000553949 ICAM4Q14773 271 aa9.05□□□□□ -0.96
SHMT2-209ENST00000553949 DEFB121Q5J5C9 76 aa9.05□□□□□ -0.96
SHMT2-209ENST00000553949 TEX261Q6UWH6 196 aa9.05□□□□□ -0.96
SHMT2-209ENST00000553949 FOXI2Q6ZQN5 318 aa9.05□□□□□ -0.96
SHMT2-209ENST00000553949 RPUSD4Q96CM3 377 aaKnown RBP9.05□□□□□ -0.96
SHMT2-209ENST00000553949 MRPL53Q96EL3 112 aaKnown RBP9.05□□□□□ -0.96
SHMT2-209ENST00000553949 Q9H3A6 140 aa9.05□□□□□ -0.96
SHMT2-209ENST00000553949 SAV1Q9H4B6 383 aaPredicted RBP9.05□□□□□ -0.96
SHMT2-209ENST00000553949 OTORQ9NRC9 128 aa9.05□□□□□ -0.96
SHMT2-209ENST00000553949 PRELID1Q9Y255 219 aa9.05□□□□□ -0.96
SHMT2-209ENST00000553949 MEGF8Q7Z7M0 2845 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms