RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 MRGPRG-AS1Q2M3A8 158 aa9.77□□□□□ -0.85
SHMT2-207ENST00000553837 RBPMS2Q6ZRY4 209 aaKnown RBP9.77□□□□□ -0.85
SHMT2-207ENST00000553837 OR1L8Q8NGR8 309 aa9.77□□□□□ -0.85
SHMT2-207ENST00000553837 OR10X1Q8NGY0 326 aa9.77□□□□□ -0.85
SHMT2-207ENST00000553837 FLYWCH2Q96CP2 140 aaKnown RBP9.77□□□□□ -0.85
SHMT2-207ENST00000553837 PGLYRP4Q96LB8 373 aa9.77□□□□□ -0.85
SHMT2-207ENST00000553837 JMJD8Q96S16 334 aa9.77□□□□□ -0.85
SHMT2-207ENST00000553837 PRSS22Q9GZN4 317 aa9.77□□□□□ -0.85
SHMT2-207ENST00000553837 TSSC4Q9Y5U2 329 aaPredicted RBP9.77□□□□□ -0.85
SHMT2-207ENST00000553837 NAV3Q8IVL0 2385 aa9.76□□□□□ -0.85
SHMT2-207ENST00000553837 TEX48A0A1B0GUV7 120 aa9.76□□□□□ -0.85
SHMT2-207ENST00000553837 PLXNB1O43157 2135 aa9.76□□□□□ -0.85
SHMT2-207ENST00000553837 IGHV3-48P01763 117 aa9.76□□□□□ -0.85
SHMT2-207ENST00000553837 GRNP28799 593 aaKnown RBP9.76□□□□□ -0.85
SHMT2-207ENST00000553837 RPL24P83731 157 aaKnown RBP9.76□□□□□ -0.85
SHMT2-207ENST00000553837 CD69Q07108 199 aa9.76□□□□□ -0.85
SHMT2-207ENST00000553837 TMEM155Q4W5P6 130 aa9.76□□□□□ -0.85
SHMT2-207ENST00000553837 MORN5Q5VZ52 161 aa9.76□□□□□ -0.85
SHMT2-207ENST00000553837 OR1L4Q8NGR5 311 aa9.76□□□□□ -0.85
SHMT2-207ENST00000553837 GPR82Q96P67 336 aa9.76□□□□□ -0.85
SHMT2-207ENST00000553837 TMUB1Q9BVT8 246 aa9.76□□□□□ -0.85
SHMT2-207ENST00000553837 DYNLRB1Q9NP97 96 aa9.76□□□□□ -0.85
SHMT2-207ENST00000553837 TACC2O95359 2948 aa9.76□□□□□ -0.85
SHMT2-207ENST00000553837 COX7A2P2O60397 106 aa9.75□□□□□ -0.85
SHMT2-207ENST00000553837 P01737 135 aa9.75□□□□□ -0.85
SHMT2-207ENST00000553837 PYYP10082 97 aa9.75□□□□□ -0.85
SHMT2-207ENST00000553837 KIR3DS1Q14943 382 aa9.75□□□□□ -0.85
SHMT2-207ENST00000553837 PRR31Q5SQ13 230 aa9.75□□□□□ -0.85
SHMT2-207ENST00000553837 LINC00311Q8N616 119 aa9.75□□□□□ -0.85
SHMT2-207ENST00000553837 LINC01560Q8TB33 94 aa9.75□□□□□ -0.85
SHMT2-207ENST00000553837 RABAC1Q9UI14 185 aa9.75□□□□□ -0.85
SHMT2-207ENST00000553837 EPDR1Q9UM22 224 aa9.75□□□□□ -0.85
SHMT2-207ENST00000553837 KLF12Q9Y4X4 402 aa9.75□□□□□ -0.85
SHMT2-207ENST00000553837 SPCS1Q9Y6A9 102 aa9.75□□□□□ -0.85
SHMT2-207ENST00000553837 IGHV3-72A0A0B4J1Y9 119 aa9.75□□□□□ -0.85
SHMT2-207ENST00000553837 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.75□□□□□ -0.85
SHMT2-207ENST00000553837 SIVA1O15304 175 aa9.75□□□□□ -0.85
SHMT2-207ENST00000553837 ZNF138P52744 262 aa9.75□□□□□ -0.85
SHMT2-207ENST00000553837 FOXE3Q13461 319 aa9.75□□□□□ -0.85
SHMT2-207ENST00000553837 C10orf113Q5VZT2 155 aa9.75□□□□□ -0.85
SHMT2-207ENST00000553837 RUSC1-AS1Q66K80 236 aa9.75□□□□□ -0.85
SHMT2-207ENST00000553837 TEX45Q8NA69 505 aa9.75□□□□□ -0.85
SHMT2-207ENST00000553837 TMEM167AQ8TBQ9 72 aa9.75□□□□□ -0.85
SHMT2-207ENST00000553837 GTSF1Q8WW33 167 aa9.75□□□□□ -0.85
SHMT2-207ENST00000553837 NEU4Q8WWR8 484 aaPredicted RBP9.75□□□□□ -0.85
SHMT2-207ENST00000553837 CACNG8Q8WXS5 425 aa9.75□□□□□ -0.85
SHMT2-207ENST00000553837 DAZAP1Q96EP5 407 aaKnown RBP9.75□□□□□ -0.85
SHMT2-207ENST00000553837 ZNF747Q9BV97 191 aa9.75□□□□□ -0.85
SHMT2-207ENST00000553837 MRPL36Q9P0J6 103 aaKnown RBP9.75□□□□□ -0.85
SHMT2-207ENST00000553837 KAAG1Q9UBP8 84 aa9.75□□□□□ -0.85
SHMT2-207ENST00000553837 A0A1W2PPM0 123 aa9.74□□□□□ -0.85
SHMT2-207ENST00000553837 IGHV1-8P0DP01 117 aa9.74□□□□□ -0.85
SHMT2-207ENST00000553837 FGF6P10767 208 aa9.74□□□□□ -0.85
SHMT2-207ENST00000553837 CSN1S1P47710 185 aa9.74□□□□□ -0.85
SHMT2-207ENST00000553837 OR4C13Q8NGP0 309 aa9.74□□□□□ -0.85
SHMT2-207ENST00000553837 OR9G4Q8NGQ1 327 aa9.74□□□□□ -0.85
SHMT2-207ENST00000553837 BLNKQ8WV28 456 aa9.74□□□□□ -0.85
SHMT2-207ENST00000553837 ZNF492Q9P255 531 aa9.74□□□□□ -0.85
SHMT2-207ENST00000553837 ZZEF1O43149 2961 aa9.74□□□□□ -0.85
SHMT2-207ENST00000553837 MYCNOSP40205 109 aa9.74□□□□□ -0.85
SHMT2-207ENST00000553837 ZNF137PP52743 207 aa9.74□□□□□ -0.85
SHMT2-207ENST00000553837 CDSNQ15517 529 aa9.74□□□□□ -0.85
SHMT2-207ENST00000553837 PDPNQ86YL7 162 aa9.74□□□□□ -0.85
SHMT2-207ENST00000553837 C8orf31Q8N9H6 132 aa9.74□□□□□ -0.85
SHMT2-207ENST00000553837 OR4X2Q8NGF9 303 aa9.74□□□□□ -0.85
SHMT2-207ENST00000553837 ZNF418Q8TF45 676 aaPredicted RBP9.74□□□□□ -0.85
SHMT2-207ENST00000553837 MLST8Q9BVC4 326 aa9.74□□□□□ -0.85
SHMT2-207ENST00000553837 TIMM8BQ9Y5J9 83 aaPredicted RBP9.74□□□□□ -0.85
SHMT2-207ENST00000553837 A1L4Q6 167 aa9.73□□□□□ -0.85
SHMT2-207ENST00000553837 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.73□□□□□ -0.85
SHMT2-207ENST00000553837 HAX1O00165 279 aa9.73□□□□□ -0.85
SHMT2-207ENST00000553837 SLC25A5P05141 298 aaKnown RBP9.73□□□□□ -0.85
SHMT2-207ENST00000553837 FABP2P12104 132 aa9.73□□□□□ -0.85
SHMT2-207ENST00000553837 GNG5P63218 68 aa9.73□□□□□ -0.85
SHMT2-207ENST00000553837 BOD1L2Q8IYS8 172 aa9.73□□□□□ -0.85
SHMT2-207ENST00000553837 FXYD5Q96DB9 178 aa9.73□□□□□ -0.85
SHMT2-207ENST00000553837 VKORC1Q9BQB6 163 aa9.73□□□□□ -0.85
SHMT2-207ENST00000553837 AP5S1Q9NUS5 200 aa9.73□□□□□ -0.85
SHMT2-207ENST00000553837 IGKV1D-37A0A075B6S9 117 aa9.73□□□□□ -0.85
SHMT2-207ENST00000553837 C19orf71A6NCJ1 209 aa9.73□□□□□ -0.85
SHMT2-207ENST00000553837 INS-IGF2F8WCM5 200 aa9.73□□□□□ -0.85
SHMT2-207ENST00000553837 MOSP00540 346 aa9.73□□□□□ -0.85
SHMT2-207ENST00000553837 CNTFRP26992 372 aa9.73□□□□□ -0.85
SHMT2-207ENST00000553837 PERPQ96FX8 193 aa9.73□□□□□ -0.85
SHMT2-207ENST00000553837 A0A1W2PPI3 338 aa9.72□□□□□ -0.85
SHMT2-207ENST00000553837 APOHP02749 345 aaPredicted RBP9.72□□□□□ -0.85
SHMT2-207ENST00000553837 CLEC3BP05452 202 aa9.72□□□□□ -0.85
SHMT2-207ENST00000553837 CSN3P07498 182 aa9.72□□□□□ -0.85
SHMT2-207ENST00000553837 ERHP84090 104 aaKnown RBP9.72□□□□□ -0.85
SHMT2-207ENST00000553837 LINC00322Q6ZN03 302 aaPredicted RBP9.72□□□□□ -0.85
SHMT2-207ENST00000553837 FMC1Q96HJ9 113 aa9.72□□□□□ -0.85
SHMT2-207ENST00000553837 TMEM133Q9H2Q1 129 aa9.72□□□□□ -0.85
SHMT2-207ENST00000553837 NGBQ9NPG2 151 aa9.72□□□□□ -0.85
SHMT2-207ENST00000553837 HILPDAQ9Y5L2 63 aa9.72□□□□□ -0.85
SHMT2-207ENST00000553837 SELENOKQ9Y6D0 94 aa9.72□□□□□ -0.85
SHMT2-207ENST00000553837 TRBV7-9A0A0J9YWB2 115 aa9.71□□□□□ -0.85
SHMT2-207ENST00000553837 PGPA6NDG6 321 aa9.71□□□□□ -0.85
SHMT2-207ENST00000553837 FAM90A27PA6NNH2 459 aa9.71□□□□□ -0.85
SHMT2-207ENST00000553837 SMAD7O15105 426 aaKnown RBP9.71□□□□□ -0.85
SHMT2-207ENST00000553837 CD3EP07766 207 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms