RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 TRAV12-3A0A0B4J271 114 aa9.16□□□□□ -0.94
PRPF39-204ENST00000553605 IGHV3-53P01767 116 aa9.16□□□□□ -0.94
PRPF39-204ENST00000553605 SULT1A3P0DMM9 295 aa9.16□□□□□ -0.94
PRPF39-204ENST00000553605 SULT1A4P0DMN0 295 aa9.16□□□□□ -0.94
PRPF39-204ENST00000553605 RPL7P18124 248 aaKnown RBP9.16□□□□□ -0.94
PRPF39-204ENST00000553605 GATA2P23769 480 aaPredicted RBP9.16□□□□□ -0.94
PRPF39-204ENST00000553605 GPR107Q5VW38 600 aa9.16□□□□□ -0.94
PRPF39-204ENST00000553605 TMEM268Q5VZI3 342 aa9.16□□□□□ -0.94
PRPF39-204ENST00000553605 STEAP1BQ6NZ63 245 aa9.16□□□□□ -0.94
PRPF39-204ENST00000553605 BPIFCQ8NFQ6 507 aa9.16□□□□□ -0.94
PRPF39-204ENST00000553605 ST6GAL2Q96JF0 529 aa9.16□□□□□ -0.94
PRPF39-204ENST00000553605 C8orf49Q96NF6 230 aa9.16□□□□□ -0.94
PRPF39-204ENST00000553605 RBKSQ9H477 322 aa9.16□□□□□ -0.94
PRPF39-204ENST00000553605 PKHD1L1Q86WI1 4243 aa9.16□□□□□ -0.94
PRPF39-204ENST00000553605 J3KRW8 73 aa9.15□□□□□ -0.94
PRPF39-204ENST00000553605 MT1HL1P0DM35 61 aa9.15□□□□□ -0.94
PRPF39-204ENST00000553605 SRIP30626 198 aa9.15□□□□□ -0.94
PRPF39-204ENST00000553605 RNASE10Q5GAN6 216 aaKnown RBP9.15□□□□□ -0.94
PRPF39-204ENST00000553605 TMEM182Q6ZP80 229 aaPredicted RBP9.15□□□□□ -0.94
PRPF39-204ENST00000553605 SNX29P2Q8IUI4 249 aa9.15□□□□□ -0.94
PRPF39-204ENST00000553605 CROCCP3Q8IVE0 287 aa9.15□□□□□ -0.94
PRPF39-204ENST00000553605 C11orf72Q8NBR9 251 aa9.15□□□□□ -0.94
PRPF39-204ENST00000553605 OR13C8Q8NGS7 320 aa9.15□□□□□ -0.94
PRPF39-204ENST00000553605 CHAC1Q9BUX1 264 aa9.15□□□□□ -0.94
PRPF39-204ENST00000553605 HSPB7Q9UBY9 170 aa9.15□□□□□ -0.94
PRPF39-204ENST00000553605 A0A087X0K7 114 aa9.14□□□□□ -0.95
PRPF39-204ENST00000553605 IBA57-AS1B1ANH7 110 aa9.14□□□□□ -0.95
PRPF39-204ENST00000553605 H3BRN7 92 aa9.14□□□□□ -0.95
PRPF39-204ENST00000553605 K7EQD1 137 aa9.14□□□□□ -0.95
PRPF39-204ENST00000553605 SPINK4O60575 86 aa9.14□□□□□ -0.95
PRPF39-204ENST00000553605 FHL2Q14192 279 aa9.14□□□□□ -0.95
PRPF39-204ENST00000553605 ZNF680Q8NEM1 530 aa9.14□□□□□ -0.95
PRPF39-204ENST00000553605 TERB2Q8NHR7 220 aa9.14□□□□□ -0.95
PRPF39-204ENST00000553605 Q9HAA7 133 aa9.14□□□□□ -0.95
PRPF39-204ENST00000553605 SMIM31A0A1B0GVY4 71 aa9.13□□□□□ -0.95
PRPF39-204ENST00000553605 E5RGE8 158 aa9.13□□□□□ -0.95
PRPF39-204ENST00000553605 TNFAIP8O95379 198 aa9.13□□□□□ -0.95
PRPF39-204ENST00000553605 ZNF415Q09FC8 603 aa9.13□□□□□ -0.95
PRPF39-204ENST00000553605 OR1S1Q8NH92 325 aa9.13□□□□□ -0.95
PRPF39-204ENST00000553605 CIRBP-AS1Q8TBR5 109 aa9.13□□□□□ -0.95
PRPF39-204ENST00000553605 MARCH1Q8TCQ1 289 aa9.13□□□□□ -0.95
PRPF39-204ENST00000553605 ZNF431Q8TF32 576 aaPredicted RBP9.13□□□□□ -0.95
PRPF39-204ENST00000553605 CNBD2Q96M20 576 aa9.13□□□□□ -0.95
PRPF39-204ENST00000553605 SHANK2-AS3Q9BTD1 123 aa9.13□□□□□ -0.95
PRPF39-204ENST00000553605 MRPL32Q9BYC8 188 aaKnown RBP9.13□□□□□ -0.95
PRPF39-204ENST00000553605 NAA60Q9H7X0 242 aa9.13□□□□□ -0.95
PRPF39-204ENST00000553605 KLF12Q9Y4X4 402 aa9.13□□□□□ -0.95
PRPF39-204ENST00000553605 IGHV3-38A0A0C4DH36 116 aa9.12□□□□□ -0.95
PRPF39-204ENST00000553605 CD3DP04234 171 aa9.12□□□□□ -0.95
PRPF39-204ENST00000553605 RAP2BP61225 183 aa9.12□□□□□ -0.95
PRPF39-204ENST00000553605 RAB11AP62491 216 aa9.12□□□□□ -0.95
PRPF39-204ENST00000553605 WFDC2Q14508 124 aa9.12□□□□□ -0.95
PRPF39-204ENST00000553605 LINC01620Q4KN68 170 aa9.12□□□□□ -0.95
PRPF39-204ENST00000553605 DNAJC4Q9NNZ3 241 aa9.12□□□□□ -0.95
PRPF39-204ENST00000553605 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.11□□□□□ -0.95
PRPF39-204ENST00000553605 GYPEP15421 78 aa9.11□□□□□ -0.95
PRPF39-204ENST00000553605 LEPP41159 167 aa9.11□□□□□ -0.95
PRPF39-204ENST00000553605 CCR6P51684 374 aa9.11□□□□□ -0.95
PRPF39-204ENST00000553605 HNRNPA3P51991 378 aaKnown RBP9.11□□□□□ -0.95
PRPF39-204ENST00000553605 GABARAPL2P60520 117 aa9.11□□□□□ -0.95
PRPF39-204ENST00000553605 ASAH1Q13510 395 aa9.11□□□□□ -0.95
PRPF39-204ENST00000553605 ACOT6Q3I5F7 207 aaPredicted RBP9.11□□□□□ -0.95
PRPF39-204ENST00000553605 SCGB2B2Q4G0G5 96 aa9.11□□□□□ -0.95
PRPF39-204ENST00000553605 PCNPQ8WW12 178 aaKnown RBP9.11□□□□□ -0.95
PRPF39-204ENST00000553605 VGLL1Q99990 258 aa9.11□□□□□ -0.95
PRPF39-204ENST00000553605 RTBDNQ9BSG5 229 aaPredicted RBP9.11□□□□□ -0.95
PRPF39-204ENST00000553605 PAIP2BQ9ULR5 123 aaKnown RBP9.11□□□□□ -0.95
PRPF39-204ENST00000553605 C14orf166Q9Y224 244 aaKnown RBP9.11□□□□□ -0.95
PRPF39-204ENST00000553605 HIGD1AQ9Y241 93 aa9.11□□□□□ -0.95
PRPF39-204ENST00000553605 PRAC2D3DTV9 90 aa9.1□□□□□ -0.95
PRPF39-204ENST00000553605 IGLV2-8P01709 118 aa9.1□□□□□ -0.95
PRPF39-204ENST00000553605 CT45A10P0DMU9 189 aa9.1□□□□□ -0.95
PRPF39-204ENST00000553605 TCL1AP56279 114 aa9.1□□□□□ -0.95
PRPF39-204ENST00000553605 RPL37AP61513 92 aaKnown RBP9.1□□□□□ -0.95
PRPF39-204ENST00000553605 SMCO1Q147U7 214 aa9.1□□□□□ -0.95
PRPF39-204ENST00000553605 TEPPQ6URK8 271 aa9.1□□□□□ -0.95
PRPF39-204ENST00000553605 NRG4Q8WWG1 115 aa9.1□□□□□ -0.95
PRPF39-204ENST00000553605 DAZAP1Q96EP5 407 aaKnown RBP9.1□□□□□ -0.95
PRPF39-204ENST00000553605 ZNF331Q9NQX6 463 aaPredicted RBP9.1□□□□□ -0.95
PRPF39-204ENST00000553605 MRPL16Q9NX20 251 aaKnown RBP9.1□□□□□ -0.95
PRPF39-204ENST00000553605 TNXBP22105 4242 aa9.09□□□□□ -0.95
PRPF39-204ENST00000553605 TRGV4A0A0C4DH28 118 aa9.09□□□□□ -0.95
PRPF39-204ENST00000553605 LINC00854A0A1B0GVQ3 168 aa9.09□□□□□ -0.95
PRPF39-204ENST00000553605 CRYM-AS1A6NIL9 109 aa9.09□□□□□ -0.95
PRPF39-204ENST00000553605 PMS2P5A8MQ11 134 aa9.09□□□□□ -0.95
PRPF39-204ENST00000553605 ANXA7P20073 488 aaKnown RBP9.09□□□□□ -0.95
PRPF39-204ENST00000553605 RPS19P39019 145 aaKnown RBP9.09□□□□□ -0.95
PRPF39-204ENST00000553605 TDRG1Q3Y452 100 aa9.09□□□□□ -0.95
PRPF39-204ENST00000553605 ANXA2RQ3ZCQ2 193 aa9.09□□□□□ -0.95
PRPF39-204ENST00000553605 LINC01556Q5JQF7 62 aa9.09□□□□□ -0.95
PRPF39-204ENST00000553605 EIF4E3Q8N5X7 224 aaKnown RBP9.09□□□□□ -0.95
PRPF39-204ENST00000553605 ZBTB8BQ8NAP8 495 aaPredicted RBP9.09□□□□□ -0.95
PRPF39-204ENST00000553605 OR4D10Q8NGI6 311 aa9.09□□□□□ -0.95
PRPF39-204ENST00000553605 ODF3Q96PU9 254 aa9.09□□□□□ -0.95
PRPF39-204ENST00000553605 TM2D2Q9BX73 214 aa9.09□□□□□ -0.95
PRPF39-204ENST00000553605 LECT2O14960 151 aa9.08□□□□□ -0.96
PRPF39-204ENST00000553605 HYPMO75409 117 aa9.08□□□□□ -0.96
PRPF39-204ENST00000553605 ORM1P02763 201 aa9.08□□□□□ -0.96
PRPF39-204ENST00000553605 OR5G3P0C626 314 aa9.08□□□□□ -0.96
PRPF39-204ENST00000553605 CXCL2P19875 107 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms