RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 RFNGQ9Y644 331 aa17.31■□□□□ 0.36
TDP1-205ENST00000553527 GALR1P47211 349 aa17.3■□□□□ 0.36
TDP1-205ENST00000553527 SH3BGRL3Q9H299 93 aa17.3■□□□□ 0.36
TDP1-205ENST00000553527 RPL7P18124 248 aaKnown RBP17.29■□□□□ 0.36
TDP1-205ENST00000553527 OR2G3Q8NGZ4 309 aa17.29■□□□□ 0.36
TDP1-205ENST00000553527 RARRES2Q99969 163 aa17.29■□□□□ 0.36
TDP1-205ENST00000553527 ZNF471Q9BX82 626 aaPredicted RBP17.29■□□□□ 0.36
TDP1-205ENST00000553527 ACOT6Q3I5F7 207 aaPredicted RBP17.28■□□□□ 0.36
TDP1-205ENST00000553527 LGALSLQ3ZCW2 172 aaPredicted RBP17.28■□□□□ 0.36
TDP1-205ENST00000553527 FAM78BQ5VT40 261 aa17.28■□□□□ 0.36
TDP1-205ENST00000553527 MORN5Q5VZ52 161 aa17.28■□□□□ 0.36
TDP1-205ENST00000553527 TRPT1Q86TN4 253 aaKnown RBP17.28■□□□□ 0.36
TDP1-205ENST00000553527 OR11H2Q8NH07 326 aa17.28■□□□□ 0.36
TDP1-205ENST00000553527 LINC00052Q96N35 136 aa17.28■□□□□ 0.36
TDP1-205ENST00000553527 CSMD3Q7Z407 3707 aa17.28■□□□□ 0.36
TDP1-205ENST00000553527 MRPL32Q9BYC8 188 aaKnown RBP17.27■□□□□ 0.36
TDP1-205ENST00000553527 ATF4P18848 351 aaPredicted RBP17.26■□□□□ 0.35
TDP1-205ENST00000553527 SEPSECSQ9HD40 501 aaKnown RBP17.26■□□□□ 0.35
TDP1-205ENST00000553527 TENM2Q9NT68 2774 aa17.25■□□□□ 0.35
TDP1-205ENST00000553527 TRAV5A0A0B4J249 113 aa17.25■□□□□ 0.35
TDP1-205ENST00000553527 M6PRP20645 277 aa17.25■□□□□ 0.35
TDP1-205ENST00000553527 DEFB1P60022 68 aa17.25■□□□□ 0.35
TDP1-205ENST00000553527 RAB2AP61019 212 aa17.25■□□□□ 0.35
TDP1-205ENST00000553527 RHOBP62745 196 aa17.25■□□□□ 0.35
TDP1-205ENST00000553527 EIF5AP63241 154 aaKnown RBP17.25■□□□□ 0.35
TDP1-205ENST00000553527 SERF2P84101 59 aa17.25■□□□□ 0.35
TDP1-205ENST00000553527 PMS2P11Q13670 270 aa17.25■□□□□ 0.35
TDP1-205ENST00000553527 SPATA31B1PQ5VZV4 182 aa17.25■□□□□ 0.35
TDP1-205ENST00000553527 BPIFA4PQ86YQ2 179 aa17.25■□□□□ 0.35
TDP1-205ENST00000553527 C9orf62Q8N4C0 152 aa17.25■□□□□ 0.35
TDP1-205ENST00000553527 FUT9Q9Y231 359 aa17.25■□□□□ 0.35
TDP1-205ENST00000553527 MBP02144 154 aa17.24■□□□□ 0.35
TDP1-205ENST00000553527 ID1P41134 155 aa17.24■□□□□ 0.35
TDP1-205ENST00000553527 MIR17HGQ75NE6 70 aa17.24■□□□□ 0.35
TDP1-205ENST00000553527 CLEC5AQ9NY25 188 aa17.24■□□□□ 0.35
TDP1-205ENST00000553527 SPP1P10451 314 aa17.23■□□□□ 0.35
TDP1-205ENST00000553527 C4BPBP20851 252 aa17.23■□□□□ 0.35
TDP1-205ENST00000553527 MEOX2P50222 304 aa17.23■□□□□ 0.35
TDP1-205ENST00000553527 MORN3Q6PF18 240 aaPredicted RBP17.23■□□□□ 0.35
TDP1-205ENST00000553527 OR10G4Q8NGN3 311 aa17.23■□□□□ 0.35
TDP1-205ENST00000553527 OR10G9Q8NGN4 311 aa17.23■□□□□ 0.35
TDP1-205ENST00000553527 OR10G7Q8NGN6 311 aa17.23■□□□□ 0.35
TDP1-205ENST00000553527 STARD9Q9P2P6 4700 aa17.23■□□□□ 0.35
TDP1-205ENST00000553527 CXorf65A6NEN9 183 aa17.22■□□□□ 0.35
TDP1-205ENST00000553527 DEFB4AO15263 64 aa17.22■□□□□ 0.35
TDP1-205ENST00000553527 IGKV3-20P01619 116 aa17.22■□□□□ 0.35
TDP1-205ENST00000553527 GIG44P09565 113 aaPredicted RBP17.22■□□□□ 0.35
TDP1-205ENST00000553527 TPT1P13693 172 aaKnown RBP17.22■□□□□ 0.35
TDP1-205ENST00000553527 SAMD13Q5VXD3 122 aa17.22■□□□□ 0.35
TDP1-205ENST00000553527 FAM122CQ6P4D5 195 aa17.22■□□□□ 0.35
TDP1-205ENST00000553527 C16orf92Q96LL3 132 aa17.22■□□□□ 0.35
TDP1-205ENST00000553527 SLC25A2Q9BXI2 301 aa17.22■□□□□ 0.35
TDP1-205ENST00000553527 A0A087X0K7 114 aa17.21■□□□□ 0.35
TDP1-205ENST00000553527 A0A1W2PPV4 95 aa17.21■□□□□ 0.35
TDP1-205ENST00000553527 MRPS12O15235 138 aaKnown RBP17.21■□□□□ 0.35
TDP1-205ENST00000553527 NKX2-5P52952 324 aaPredicted RBP17.21■□□□□ 0.35
TDP1-205ENST00000553527 TMEM41BQ5BJD5 291 aa17.21■□□□□ 0.35
TDP1-205ENST00000553527 GDF5OSQ5U4N7 250 aa17.21■□□□□ 0.35
TDP1-205ENST00000553527 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.21■□□□□ 0.35
TDP1-205ENST00000553527 STOML3Q8TAV4 291 aa17.21■□□□□ 0.35
TDP1-205ENST00000553527 H3BMM0 161 aa17.2■□□□□ 0.34
TDP1-205ENST00000553527 PSMB3P49720 205 aa17.2■□□□□ 0.34
TDP1-205ENST00000553527 TAS2R45P59539 299 aa17.2■□□□□ 0.34
TDP1-205ENST00000553527 AKR1C8PQ5T2L2 129 aa17.2■□□□□ 0.34
TDP1-205ENST00000553527 BAP18Q8IXM2 172 aa17.2■□□□□ 0.34
TDP1-205ENST00000553527 TMEM14CQ9P0S9 112 aa17.2■□□□□ 0.34
TDP1-205ENST00000553527 SOCS3O14543 225 aa17.19■□□□□ 0.34
TDP1-205ENST00000553527 CDC34P49427 236 aaPredicted RBP17.19■□□□□ 0.34
TDP1-205ENST00000553527 KHDC3LQ587J8 217 aa17.19■□□□□ 0.34
TDP1-205ENST00000553527 FAM167A-AS1Q96KT0 104 aa17.19■□□□□ 0.34
TDP1-205ENST00000553527 ISLRO14498 428 aa17.18■□□□□ 0.34
TDP1-205ENST00000553527 OR7C2O60412 319 aa17.18■□□□□ 0.34
TDP1-205ENST00000553527 IGLC2P0DOY2 106 aa17.18■□□□□ 0.34
TDP1-205ENST00000553527 PYYP10082 97 aa17.18■□□□□ 0.34
TDP1-205ENST00000553527 FXYD7P58549 80 aa17.18■□□□□ 0.34
TDP1-205ENST00000553527 LCN15Q6UWW0 184 aa17.18■□□□□ 0.34
TDP1-205ENST00000553527 SLC51BQ86UW2 128 aa17.18■□□□□ 0.34
TDP1-205ENST00000553527 OR4B1Q8NGF8 309 aa17.18■□□□□ 0.34
TDP1-205ENST00000553527 C17orf77Q96MU5 243 aa17.18■□□□□ 0.34
TDP1-205ENST00000553527 RPRMQ9NS64 109 aa17.18■□□□□ 0.34
TDP1-205ENST00000553527 XCL2Q9UBD3 114 aa17.18■□□□□ 0.34
TDP1-205ENST00000553527 F6UB75 175 aa17.17■□□□□ 0.34
TDP1-205ENST00000553527 SNRPCP09234 159 aaKnown RBP17.17■□□□□ 0.34
TDP1-205ENST00000553527 SEC11BP0C7V7 166 aa17.17■□□□□ 0.34
TDP1-205ENST00000553527 HLA-DRB4P13762 266 aa17.17■□□□□ 0.34
TDP1-205ENST00000553527 NUTF2P61970 127 aaKnown RBP17.17■□□□□ 0.34
TDP1-205ENST00000553527 IGFL4Q6B9Z1 124 aa17.17■□□□□ 0.34
TDP1-205ENST00000553527 RPP25LQ8N5L8 163 aaKnown RBP17.17■□□□□ 0.34
TDP1-205ENST00000553527 LRRC20Q8TCA0 184 aa17.17■□□□□ 0.34
TDP1-205ENST00000553527 C20orf173Q96LM9 149 aa17.17■□□□□ 0.34
TDP1-205ENST00000553527 PAXXQ9BUH6 204 aa17.17■□□□□ 0.34
TDP1-205ENST00000553527 HRH4Q9H3N8 390 aa17.17■□□□□ 0.34
TDP1-205ENST00000553527 SAV1Q9H4B6 383 aaPredicted RBP17.17■□□□□ 0.34
TDP1-205ENST00000553527 HLA-DRB4X5D2U9 266 aa17.17■□□□□ 0.34
TDP1-205ENST00000553527 H3BTX0 84 aa17.16■□□□□ 0.34
TDP1-205ENST00000553527 EIF3GO75821 320 aaKnown RBP eCLIP17.16■□□□□ 0.34
TDP1-205ENST00000553527 GUK1Q16774 197 aa17.16■□□□□ 0.34
TDP1-205ENST00000553527 ACTR3CQ9C0K3 210 aaPredicted RBP17.16■□□□□ 0.34
TDP1-205ENST00000553527 OR51M1Q9H341 326 aa17.16■□□□□ 0.34
TDP1-205ENST00000553527 RYR3Q15413 4870 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms