RNA–Protein interactions for RNA: ENST00000552610.1

RAB3IP-217, Transcript of RAB3A interacting protein, humanhuman

TSL 2

Gene RAB3IP, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-217ENST00000552610 CYSTM1Q9H1C7 97 aa1.89□□□□□ -2.11
RAB3IP-217ENST00000552610 OR5AC2Q9NZP5 309 aa1.89□□□□□ -2.11
RAB3IP-217ENST00000552610 SLC35A3Q9Y2D2 325 aa1.89□□□□□ -2.11
RAB3IP-217ENST00000552610 USP54Q70EL1 1684 aa1.89□□□□□ -2.11
RAB3IP-217ENST00000552610 TNRC6CQ9HCJ0 1690 aaKnown RBP1.89□□□□□ -2.11
RAB3IP-217ENST00000552610 KIF20BQ96Q89 1820 aa1.89□□□□□ -2.11
RAB3IP-217ENST00000552610 FREM1Q5H8C1 2179 aa1.88□□□□□ -2.11
RAB3IP-217ENST00000552610 AKAP11Q9UKA4 1901 aa1.88□□□□□ -2.11
RAB3IP-217ENST00000552610 IGKV1D-42A0A075B6H8 117 aa1.88□□□□□ -2.11
RAB3IP-217ENST00000552610 G3V2T6 193 aa1.88□□□□□ -2.11
RAB3IP-217ENST00000552610 MIFP14174 115 aa1.88□□□□□ -2.11
RAB3IP-217ENST00000552610 SRIP30626 198 aa1.88□□□□□ -2.11
RAB3IP-217ENST00000552610 PPP1R2P41236 205 aa1.88□□□□□ -2.11
RAB3IP-217ENST00000552610 NCALDP61601 193 aa1.88□□□□□ -2.11
RAB3IP-217ENST00000552610 SCGB2B2Q4G0G5 96 aa1.88□□□□□ -2.11
RAB3IP-217ENST00000552610 PPP1R2P3Q6NXS1 205 aa1.88□□□□□ -2.11
RAB3IP-217ENST00000552610 LYG2Q86SG7 212 aa1.88□□□□□ -2.11
RAB3IP-217ENST00000552610 DEFB119Q8N690 84 aa1.88□□□□□ -2.11
RAB3IP-217ENST00000552610 OR13C6PQ8NH95 151 aa1.88□□□□□ -2.11
RAB3IP-217ENST00000552610 WFDC5Q8TCV5 224 aa1.88□□□□□ -2.11
RAB3IP-217ENST00000552610 ADAT3Q96EY9 351 aaPredicted RBP1.88□□□□□ -2.11
RAB3IP-217ENST00000552610 SLC50A1Q9BRV3 221 aa1.88□□□□□ -2.11
RAB3IP-217ENST00000552610 TMEM70Q9BUB7 260 aa1.88□□□□□ -2.11
RAB3IP-217ENST00000552610 MED9Q9NWA0 146 aa1.88□□□□□ -2.11
RAB3IP-217ENST00000552610 PRNDQ9UKY0 176 aa1.88□□□□□ -2.11
RAB3IP-217ENST00000552610 AFDNP55196 1824 aaKnown RBP1.88□□□□□ -2.11
RAB3IP-217ENST00000552610 TRGV10A0A0A0MS01 117 aa1.87□□□□□ -2.11
RAB3IP-217ENST00000552610 TMEM238C9JI98 176 aa1.87□□□□□ -2.11
RAB3IP-217ENST00000552610 KDM6AO15550 1401 aaPredicted RBP1.87□□□□□ -2.11
RAB3IP-217ENST00000552610 MRPS14O60783 128 aaKnown RBP1.87□□□□□ -2.11
RAB3IP-217ENST00000552610 PHBP35232 272 aa1.87□□□□□ -2.11
RAB3IP-217ENST00000552610 FER1L6Q2WGJ9 1857 aa1.87□□□□□ -2.11
RAB3IP-217ENST00000552610 BCL2L15Q5TBC7 163 aa1.87□□□□□ -2.11
RAB3IP-217ENST00000552610 PKD1L3Q7Z443 1732 aa1.87□□□□□ -2.11
RAB3IP-217ENST00000552610 AQP3Q92482 292 aa1.87□□□□□ -2.11
RAB3IP-217ENST00000552610 SLAMF6Q96DU3 332 aa1.87□□□□□ -2.11
RAB3IP-217ENST00000552610 SH3BGRL3Q9H299 93 aa1.87□□□□□ -2.11
RAB3IP-217ENST00000552610 LYRM2Q9NU23 88 aaPredicted RBP1.87□□□□□ -2.11
RAB3IP-217ENST00000552610 CCDC88CQ9P219 2028 aa1.87□□□□□ -2.11
RAB3IP-217ENST00000552610 UTP11Q9Y3A2 253 aaKnown RBP1.87□□□□□ -2.11
RAB3IP-217ENST00000552610 SORL1Q92673 2214 aa1.87□□□□□ -2.11
RAB3IP-217ENST00000552610 NCOR1O75376 2440 aa1.87□□□□□ -2.11
RAB3IP-217ENST00000552610 ZNF831Q5JPB2 1677 aa1.86□□□□□ -2.11
RAB3IP-217ENST00000552610 TRPM7Q96QT4 1865 aa1.86□□□□□ -2.11
RAB3IP-217ENST00000552610 TOGARAM1Q9Y4F4 1720 aa1.86□□□□□ -2.11
RAB3IP-217ENST00000552610 SCN11AQ9UI33 1791 aa1.86□□□□□ -2.11
RAB3IP-217ENST00000552610 IGKV1-9A0A0C4DH69 117 aa1.86□□□□□ -2.11
RAB3IP-217ENST00000552610 H7C1C5 153 aa1.86□□□□□ -2.11
RAB3IP-217ENST00000552610 OR2T1O43869 369 aa1.86□□□□□ -2.11
RAB3IP-217ENST00000552610 PROSCO94903 275 aa1.86□□□□□ -2.11
RAB3IP-217ENST00000552610 LCN6P62502 163 aa1.86□□□□□ -2.11
RAB3IP-217ENST00000552610 C12orf29Q8N999 325 aa1.86□□□□□ -2.11
RAB3IP-217ENST00000552610 OR2T10Q8NGZ9 312 aa1.86□□□□□ -2.11
RAB3IP-217ENST00000552610 MRPL32Q9BYC8 188 aaKnown RBP1.86□□□□□ -2.11
RAB3IP-217ENST00000552610 HS3ST2Q9Y278 367 aa1.86□□□□□ -2.11
RAB3IP-217ENST00000552610 VIRMAQ69YN4 1812 aaKnown RBP1.85□□□□□ -2.11
RAB3IP-217ENST00000552610 TRAV14DV4A0A0A6YYC5 116 aa1.85□□□□□ -2.11
RAB3IP-217ENST00000552610 GGCTO75223 188 aaKnown RBP1.85□□□□□ -2.11
RAB3IP-217ENST00000552610 UBL3O95164 117 aa1.85□□□□□ -2.11
RAB3IP-217ENST00000552610 ASAH2BP0C7U1 165 aa1.85□□□□□ -2.11
RAB3IP-217ENST00000552610 C22orf39Q6P5X5 142 aa1.85□□□□□ -2.11
RAB3IP-217ENST00000552610 CANT1Q8WVQ1 401 aa1.85□□□□□ -2.11
RAB3IP-217ENST00000552610 GINS3Q9BRX5 216 aa1.85□□□□□ -2.11
RAB3IP-217ENST00000552610 ADAT1Q9BUB4 502 aaKnown RBP1.85□□□□□ -2.11
RAB3IP-217ENST00000552610 BOLA2Q9H3K6 86 aa1.85□□□□□ -2.11
RAB3IP-217ENST00000552610 SSR3Q9UNL2 185 aa1.85□□□□□ -2.11
RAB3IP-217ENST00000552610 TIAM2Q8IVF5 1701 aa1.85□□□□□ -2.11
RAB3IP-217ENST00000552610 KIAA1551Q9HCM1 1747 aa1.85□□□□□ -2.11
RAB3IP-217ENST00000552610 ANKRD26Q9UPS8 1709 aa1.85□□□□□ -2.11
RAB3IP-217ENST00000552610 RP1P56715 2156 aa1.85□□□□□ -2.11
RAB3IP-217ENST00000552610 BAZ2BQ9UIF8 2168 aaKnown RBP1.85□□□□□ -2.11
RAB3IP-217ENST00000552610 NUP98P52948 1817 aa1.84□□□□□ -2.11
RAB3IP-217ENST00000552610 ANKRD31Q8N7Z5 1873 aa1.84□□□□□ -2.11
RAB3IP-217ENST00000552610 NRXN2Q9P2S2 1712 aa1.84□□□□□ -2.11
RAB3IP-217ENST00000552610 TAX1BP3O14907 124 aa1.84□□□□□ -2.11
RAB3IP-217ENST00000552610 APOA2P02652 100 aa1.84□□□□□ -2.11
RAB3IP-217ENST00000552610 RNASE4P34096 147 aaKnown RBP1.84□□□□□ -2.11
RAB3IP-217ENST00000552610 TCTAP57738 103 aa1.84□□□□□ -2.11
RAB3IP-217ENST00000552610 GNG3P63215 75 aa1.84□□□□□ -2.11
RAB3IP-217ENST00000552610 GNG5P63218 68 aa1.84□□□□□ -2.11
RAB3IP-217ENST00000552610 BRMS1LQ5PSV4 323 aa1.84□□□□□ -2.11
RAB3IP-217ENST00000552610 C10orf55Q5SWW7 151 aa1.84□□□□□ -2.11
RAB3IP-217ENST00000552610 TEX47Q8TBZ9 253 aa1.84□□□□□ -2.11
RAB3IP-217ENST00000552610 MALSU1Q96EH3 234 aa1.84□□□□□ -2.11
RAB3IP-217ENST00000552610 LINC00467Q9BRT7 94 aa1.84□□□□□ -2.11
RAB3IP-217ENST00000552610 PBDC1Q9BVG4 233 aa1.84□□□□□ -2.11
RAB3IP-217ENST00000552610 PBOV1Q9GZY1 135 aa1.84□□□□□ -2.11
RAB3IP-217ENST00000552610 ACER3Q9NUN7 267 aa1.84□□□□□ -2.11
RAB3IP-217ENST00000552610 GID8Q9NWU2 228 aa1.84□□□□□ -2.11
RAB3IP-217ENST00000552610 CRCT1Q9UGL9 99 aa1.84□□□□□ -2.11
RAB3IP-217ENST00000552610 PCDH15Q96QU1 1955 aa1.84□□□□□ -2.11
RAB3IP-217ENST00000552610 SDK1Q7Z5N4 2213 aa1.84□□□□□ -2.11
RAB3IP-217ENST00000552610 DLEC1Q9Y238 1755 aa1.84□□□□□ -2.12
RAB3IP-217ENST00000552610 IBTKQ9P2D0 1353 aaPredicted RBP1.84□□□□□ -2.12
RAB3IP-217ENST00000552610 TJP1Q07157 1748 aa1.83□□□□□ -2.12
RAB3IP-217ENST00000552610 MRC1P22897 1456 aa1.83□□□□□ -2.12
RAB3IP-217ENST00000552610 TRAV1-1A0A0B4J248 108 aa1.83□□□□□ -2.12
RAB3IP-217ENST00000552610 DUXBA0A1W2PPF3 345 aa1.83□□□□□ -2.12
RAB3IP-217ENST00000552610 IGKV2-29A2NJV5 120 aaPredicted RBP1.83□□□□□ -2.12
RAB3IP-217ENST00000552610 MGST1P10620 155 aaKnown RBP1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms