RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 TMEM241Q24JQ0 296 aa6.32□□□□□ -1.4
CHPT1-208ENST00000552215 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.32□□□□□ -1.4
CHPT1-208ENST00000552215 PATE2Q6UY27 113 aa6.32□□□□□ -1.4
CHPT1-208ENST00000552215 USMG5Q96IX5 58 aa6.32□□□□□ -1.4
CHPT1-208ENST00000552215 NDFIP1Q9BT67 221 aa6.32□□□□□ -1.4
CHPT1-208ENST00000552215 TMEM218A2RU14 115 aa6.32□□□□□ -1.4
CHPT1-208ENST00000552215 LINC01619G3V211 115 aa6.32□□□□□ -1.4
CHPT1-208ENST00000552215 SLC17A3O00476 420 aa6.32□□□□□ -1.4
CHPT1-208ENST00000552215 EBLN2Q6P2I7 272 aa6.32□□□□□ -1.4
CHPT1-208ENST00000552215 Q8N6K4 173 aa6.32□□□□□ -1.4
CHPT1-208ENST00000552215 TRGV9Q99603 122 aa6.32□□□□□ -1.4
CHPT1-208ENST00000552215 DAZ1Q9NQZ3 744 aaKnown RBP6.32□□□□□ -1.4
CHPT1-208ENST00000552215 KNCNA6PVL3 124 aa6.31□□□□□ -1.4
CHPT1-208ENST00000552215 KRBOX1C9JBD0 128 aa6.31□□□□□ -1.4
CHPT1-208ENST00000552215 AKR1D1P51857 326 aa6.31□□□□□ -1.4
CHPT1-208ENST00000552215 ZNF124Q15973 351 aa6.31□□□□□ -1.4
CHPT1-208ENST00000552215 TMEM78Q5T7P6 136 aa6.31□□□□□ -1.4
CHPT1-208ENST00000552215 PVRIGQ6DKI7 326 aa6.31□□□□□ -1.4
CHPT1-208ENST00000552215 MRPL54Q6P161 138 aaKnown RBP6.31□□□□□ -1.4
CHPT1-208ENST00000552215 SVBPQ8N300 66 aa6.31□□□□□ -1.4
CHPT1-208ENST00000552215 FAM210AQ96ND0 272 aa6.31□□□□□ -1.4
CHPT1-208ENST00000552215 PARLQ9H300 379 aa6.31□□□□□ -1.4
CHPT1-208ENST00000552215 CLPSL1A2RUU4 121 aa6.31□□□□□ -1.4
CHPT1-208ENST00000552215 CRLF1O75462 422 aa6.31□□□□□ -1.4
CHPT1-208ENST00000552215 ZNF502Q8TBZ5 544 aa6.31□□□□□ -1.4
CHPT1-208ENST00000552215 TRAV12-2A0A075B6T6 113 aa6.31□□□□□ -1.4
CHPT1-208ENST00000552215 FAM223BA6NKX1 122 aa6.31□□□□□ -1.4
CHPT1-208ENST00000552215 OVOL1O14753 267 aa6.31□□□□□ -1.4
CHPT1-208ENST00000552215 GPX1P07203 203 aa6.31□□□□□ -1.4
CHPT1-208ENST00000552215 S100PP25815 95 aa6.31□□□□□ -1.4
CHPT1-208ENST00000552215 RNASE4P34096 147 aaKnown RBP6.31□□□□□ -1.4
CHPT1-208ENST00000552215 RPL35P42766 123 aaKnown RBP6.31□□□□□ -1.4
CHPT1-208ENST00000552215 AWAT1Q58HT5 328 aa6.31□□□□□ -1.4
CHPT1-208ENST00000552215 FAM223AQ8IWN6 122 aa6.31□□□□□ -1.4
CHPT1-208ENST00000552215 FAM24BQ8N5W8 94 aa6.31□□□□□ -1.4
CHPT1-208ENST00000552215 CLDN34H7C241 214 aa6.31□□□□□ -1.4
CHPT1-208ENST00000552215 GZMBP10144 247 aa6.31□□□□□ -1.4
CHPT1-208ENST00000552215 COMMD1Q8N668 190 aa6.31□□□□□ -1.4
CHPT1-208ENST00000552215 OR10J6PQ8NGY7 276 aa6.31□□□□□ -1.4
CHPT1-208ENST00000552215 PDZD2O15018 2839 aa6.31□□□□□ -1.4
CHPT1-208ENST00000552215 BMI1P35226 326 aa6.3□□□□□ -1.4
CHPT1-208ENST00000552215 HILS1P60008 231 aa6.3□□□□□ -1.4
CHPT1-208ENST00000552215 CENPWQ5EE01 88 aa6.3□□□□□ -1.4
CHPT1-208ENST00000552215 RNASE7Q9H1E1 156 aaKnown RBP6.3□□□□□ -1.4
CHPT1-208ENST00000552215 C9JCJ5 164 aa6.3□□□□□ -1.4
CHPT1-208ENST00000552215 SNAPINO95295 136 aa6.3□□□□□ -1.4
CHPT1-208ENST00000552215 TOMM40O96008 361 aa6.3□□□□□ -1.4
CHPT1-208ENST00000552215 ATP5IP56385 69 aaPredicted RBP6.3□□□□□ -1.4
CHPT1-208ENST00000552215 SNRPD3P62318 126 aaKnown RBP6.3□□□□□ -1.4
CHPT1-208ENST00000552215 EBI3Q14213 229 aa6.3□□□□□ -1.4
CHPT1-208ENST00000552215 C15orf54Q8N8G6 183 aa6.3□□□□□ -1.4
CHPT1-208ENST00000552215 OR2D3Q8NGH3 330 aa6.3□□□□□ -1.4
CHPT1-208ENST00000552215 PEMTQ9UBM1 199 aa6.3□□□□□ -1.4
CHPT1-208ENST00000552215 UFC1Q9Y3C8 167 aa6.3□□□□□ -1.4
CHPT1-208ENST00000552215 IGKV1D-37A0A075B6S9 117 aa6.3□□□□□ -1.4
CHPT1-208ENST00000552215 ELANEP08246 267 aa6.3□□□□□ -1.4
CHPT1-208ENST00000552215 HIST1H1EP10412 219 aaKnown RBP6.3□□□□□ -1.4
CHPT1-208ENST00000552215 ID1P41134 155 aa6.3□□□□□ -1.4
CHPT1-208ENST00000552215 RHEBQ15382 184 aa6.3□□□□□ -1.4
CHPT1-208ENST00000552215 MRGPRG-AS1Q2M3A8 158 aa6.3□□□□□ -1.4
CHPT1-208ENST00000552215 CR1P17927 2039 aa6.29□□□□□ -1.4
CHPT1-208ENST00000552215 STAG3L2P0CL84 134 aa6.29□□□□□ -1.4
CHPT1-208ENST00000552215 STAG3L3P0CL85 134 aa6.29□□□□□ -1.4
CHPT1-208ENST00000552215 PDZD11Q5EBL8 140 aa6.29□□□□□ -1.4
CHPT1-208ENST00000552215 ATRAIDQ6UW56 229 aa6.29□□□□□ -1.4
CHPT1-208ENST00000552215 XCL2Q9UBD3 114 aa6.29□□□□□ -1.4
CHPT1-208ENST00000552215 POLR3KQ9Y2Y1 108 aaPredicted RBP6.29□□□□□ -1.4
CHPT1-208ENST00000552215 ISLRO14498 428 aa6.29□□□□□ -1.4
CHPT1-208ENST00000552215 MT-ND4LP03901 98 aa6.29□□□□□ -1.4
CHPT1-208ENST00000552215 S100A6P06703 90 aa6.29□□□□□ -1.4
CHPT1-208ENST00000552215 RPL19P84098 196 aaKnown RBP6.29□□□□□ -1.4
CHPT1-208ENST00000552215 MLXQ9UH92 298 aa6.29□□□□□ -1.4
CHPT1-208ENST00000552215 TSSC4Q9Y5U2 329 aaPredicted RBP6.29□□□□□ -1.4
CHPT1-208ENST00000552215 F5H697 171 aa6.29□□□□□ -1.4
CHPT1-208ENST00000552215 M0R2Z0 102 aa6.29□□□□□ -1.4
CHPT1-208ENST00000552215 LGALS1P09382 135 aaKnown RBP6.29□□□□□ -1.4
CHPT1-208ENST00000552215 HTN3P15516 51 aa6.29□□□□□ -1.4
CHPT1-208ENST00000552215 ZNF343Q6P1L6 599 aa6.29□□□□□ -1.4
CHPT1-208ENST00000552215 SPSB3Q6PJ21 355 aa6.29□□□□□ -1.4
CHPT1-208ENST00000552215 VN1R17PQ8TDU5 208 aa6.29□□□□□ -1.4
CHPT1-208ENST00000552215 C2CD4CQ8TF44 421 aa6.29□□□□□ -1.4
CHPT1-208ENST00000552215 MANBALQ9NQG1 85 aa6.29□□□□□ -1.4
CHPT1-208ENST00000552215 GCGP01275 180 aa6.29□□□□□ -1.4
CHPT1-208ENST00000552215 SLC25A2Q9BXI2 301 aa6.29□□□□□ -1.4
CHPT1-208ENST00000552215 NKX6-2Q9C056 277 aaPredicted RBP6.29□□□□□ -1.4
CHPT1-208ENST00000552215 ZNF586Q9NXT0 402 aa6.29□□□□□ -1.4
CHPT1-208ENST00000552215 C7orf77A4D0Y5 90 aa6.28□□□□□ -1.4
CHPT1-208ENST00000552215 PEX7O00628 323 aa6.28□□□□□ -1.4
CHPT1-208ENST00000552215 RGS13O14921 159 aa6.28□□□□□ -1.4
CHPT1-208ENST00000552215 CRYGCP07315 174 aa6.28□□□□□ -1.4
CHPT1-208ENST00000552215 CBLN1P23435 193 aa6.28□□□□□ -1.4
CHPT1-208ENST00000552215 C19orf24Q9BVV8 132 aa6.28□□□□□ -1.4
CHPT1-208ENST00000552215 WFDC10AQ9H1F0 79 aa6.28□□□□□ -1.4
CHPT1-208ENST00000552215 LSM4Q9Y4Z0 139 aaKnown RBP6.28□□□□□ -1.4
CHPT1-208ENST00000552215 LOC102723971A0A1B0GUV8 181 aa6.28□□□□□ -1.4
CHPT1-208ENST00000552215 FOXL1Q12952 345 aa6.28□□□□□ -1.4
CHPT1-208ENST00000552215 SPINK13Q1W4C9 94 aa6.28□□□□□ -1.4
CHPT1-208ENST00000552215 OXLD1Q5BKU9 147 aa6.28□□□□□ -1.4
CHPT1-208ENST00000552215 TMEM75Q8N9X5 138 aa6.28□□□□□ -1.4
CHPT1-208ENST00000552215 SHANK2-AS3Q9BTD1 123 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms