RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 DEFB114Q30KQ6 69 aa2.38□□□□□ -2.03
LIMA1-208ENST00000551691 MESTQ5EB52 335 aa2.38□□□□□ -2.03
LIMA1-208ENST00000551691 PRSS54Q6PEW0 395 aa2.38□□□□□ -2.03
LIMA1-208ENST00000551691 DHRS4L2Q6PKH6 230 aa2.38□□□□□ -2.03
LIMA1-208ENST00000551691 SCGB1D4Q6XE38 83 aa2.38□□□□□ -2.03
LIMA1-208ENST00000551691 SAXO1Q8IYX7 474 aa2.38□□□□□ -2.03
LIMA1-208ENST00000551691 LINC00337Q8N6G1 96 aa2.38□□□□□ -2.03
LIMA1-208ENST00000551691 Q8N6K4 173 aa2.38□□□□□ -2.03
LIMA1-208ENST00000551691 GPR32P1Q8NGA4 272 aa2.38□□□□□ -2.03
LIMA1-208ENST00000551691 CIRBP-AS1Q8TBR5 109 aa2.38□□□□□ -2.03
LIMA1-208ENST00000551691 RTN4IP1Q8WWV3 396 aaPredicted RBP2.38□□□□□ -2.03
LIMA1-208ENST00000551691 SLC35B4Q969S0 331 aa2.38□□□□□ -2.03
LIMA1-208ENST00000551691 OR51V1Q9H2C8 321 aa2.38□□□□□ -2.03
LIMA1-208ENST00000551691 OR51I2Q9H344 312 aa2.38□□□□□ -2.03
LIMA1-208ENST00000551691 MAP1LC3AQ9H492 121 aa2.38□□□□□ -2.03
LIMA1-208ENST00000551691 TPT1P8Q9HAU6 139 aa2.38□□□□□ -2.03
LIMA1-208ENST00000551691 SND1-IT1Q9HBX3 110 aa2.38□□□□□ -2.03
LIMA1-208ENST00000551691 BCL2L10Q9HD36 194 aa2.38□□□□□ -2.03
LIMA1-208ENST00000551691 CALML5Q9NZT1 146 aa2.38□□□□□ -2.03
LIMA1-208ENST00000551691 TP53TG1Q9Y2A0 90 aa2.38□□□□□ -2.03
LIMA1-208ENST00000551691 POLR1DQ9Y2S0 133 aa2.38□□□□□ -2.03
LIMA1-208ENST00000551691 NOP16Q9Y3C1 178 aaKnown RBP2.38□□□□□ -2.03
LIMA1-208ENST00000551691 NACAE9PAV3 2078 aa2.37□□□□□ -2.03
LIMA1-208ENST00000551691 TRAV41A0A0B4J266 112 aa2.37□□□□□ -2.03
LIMA1-208ENST00000551691 GMNCA6NCL1 334 aa2.37□□□□□ -2.03
LIMA1-208ENST00000551691 PANO1I0J062 215 aa2.37□□□□□ -2.03
LIMA1-208ENST00000551691 TGOLN2O43493 480 aa2.37□□□□□ -2.03
LIMA1-208ENST00000551691 OR7C2O60412 319 aa2.37□□□□□ -2.03
LIMA1-208ENST00000551691 ZNF737O75373 536 aa2.37□□□□□ -2.03
LIMA1-208ENST00000551691 CCNKO75909 580 aa2.37□□□□□ -2.03
LIMA1-208ENST00000551691 RBP4P02753 201 aa2.37□□□□□ -2.03
LIMA1-208ENST00000551691 LINC00869P0C866 280 aa2.37□□□□□ -2.03
LIMA1-208ENST00000551691 C8orf88P0DMB2 117 aa2.37□□□□□ -2.03
LIMA1-208ENST00000551691 BLVRBP30043 206 aaPredicted RBP2.37□□□□□ -2.03
LIMA1-208ENST00000551691 HAAOP46952 286 aa2.37□□□□□ -2.03
LIMA1-208ENST00000551691 NKX2-5P52952 324 aaPredicted RBP2.37□□□□□ -2.03
LIMA1-208ENST00000551691 DNAJB13P59910 316 aa2.37□□□□□ -2.03
LIMA1-208ENST00000551691 DAD1P61803 113 aa2.37□□□□□ -2.03
LIMA1-208ENST00000551691 EBI3Q14213 229 aa2.37□□□□□ -2.03
LIMA1-208ENST00000551691 LTC4SQ16873 150 aa2.37□□□□□ -2.03
LIMA1-208ENST00000551691 C4orf26Q17RF5 130 aa2.37□□□□□ -2.03
LIMA1-208ENST00000551691 ELP2Q6IA86 826 aa2.37□□□□□ -2.03
LIMA1-208ENST00000551691 GLYATQ6IB77 296 aa2.37□□□□□ -2.03
LIMA1-208ENST00000551691 MORN3Q6PF18 240 aaPredicted RBP2.37□□□□□ -2.03
LIMA1-208ENST00000551691 HAGHLQ6PII5 290 aaPredicted RBP2.37□□□□□ -2.03
LIMA1-208ENST00000551691 TRAPPC6BQ86SZ2 158 aa2.37□□□□□ -2.03
LIMA1-208ENST00000551691 UBE2DNLQ8IWF7 75 aa2.37□□□□□ -2.03
LIMA1-208ENST00000551691 Q8N9L7 120 aa2.37□□□□□ -2.03
LIMA1-208ENST00000551691 ZNF555Q8NEP9 628 aa2.37□□□□□ -2.03
LIMA1-208ENST00000551691 OR5D18Q8NGL1 313 aa2.37□□□□□ -2.03
LIMA1-208ENST00000551691 OR11H2Q8NH07 326 aa2.37□□□□□ -2.03
LIMA1-208ENST00000551691 OR52N1Q8NH53 320 aa2.37□□□□□ -2.03
LIMA1-208ENST00000551691 AQP3Q92482 292 aa2.37□□□□□ -2.03
LIMA1-208ENST00000551691 ANP32BQ92688 251 aaKnown RBP2.37□□□□□ -2.03
LIMA1-208ENST00000551691 RBPMSQ93062 196 aaKnown RBP2.37□□□□□ -2.03
LIMA1-208ENST00000551691 PTH2Q96A98 100 aa2.37□□□□□ -2.03
LIMA1-208ENST00000551691 REEP6Q96HR9 211 aa2.37□□□□□ -2.03
LIMA1-208ENST00000551691 LINC00477Q96M19 166 aa2.37□□□□□ -2.03
LIMA1-208ENST00000551691 OR52E6Q96RD3 313 aa2.37□□□□□ -2.03
LIMA1-208ENST00000551691 RTL8AQ9BWD3 113 aa2.37□□□□□ -2.03
LIMA1-208ENST00000551691 MS4A6AQ9H2W1 248 aa2.37□□□□□ -2.03
LIMA1-208ENST00000551691 CACYBPQ9HB71 228 aaKnown RBP2.37□□□□□ -2.03
LIMA1-208ENST00000551691 HRASLSQ9HDD0 168 aa2.37□□□□□ -2.03
LIMA1-208ENST00000551691 ANAPC11Q9NYG5 84 aa2.37□□□□□ -2.03
LIMA1-208ENST00000551691 KLK12Q9UKR0 248 aa2.37□□□□□ -2.03
LIMA1-208ENST00000551691 SLC22A13Q9Y226 551 aa2.37□□□□□ -2.03
LIMA1-208ENST00000551691 LSM5Q9Y4Y9 91 aaKnown RBP2.37□□□□□ -2.03
LIMA1-208ENST00000551691 hADV38S2A0JD32 116 aa2.36□□□□□ -2.03
LIMA1-208ENST00000551691 TRAPPC13A5PLN9 417 aa2.36□□□□□ -2.03
LIMA1-208ENST00000551691 C5orf58C9J3I9 102 aa2.36□□□□□ -2.03
LIMA1-208ENST00000551691 CXCR6O00574 342 aa2.36□□□□□ -2.03
LIMA1-208ENST00000551691 COPEO14579 308 aa2.36□□□□□ -2.03
LIMA1-208ENST00000551691 S1PR2O95136 353 aa2.36□□□□□ -2.03
LIMA1-208ENST00000551691 IFNA21P01568 189 aa2.36□□□□□ -2.03
LIMA1-208ENST00000551691 IFNA14P01570 189 aa2.36□□□□□ -2.03
LIMA1-208ENST00000551691 IFNA17P01571 189 aa2.36□□□□□ -2.03
LIMA1-208ENST00000551691 IGKV1-39P01597 117 aa2.36□□□□□ -2.03
LIMA1-208ENST00000551691 IGKV1D-39P04432 117 aa2.36□□□□□ -2.03
LIMA1-208ENST00000551691 IFI30P13284 250 aa2.36□□□□□ -2.03
LIMA1-208ENST00000551691 RPL12P30050 165 aaKnown RBP2.36□□□□□ -2.03
LIMA1-208ENST00000551691 OMPP47874 163 aa2.36□□□□□ -2.03
LIMA1-208ENST00000551691 GNG10P50151 68 aa2.36□□□□□ -2.03
LIMA1-208ENST00000551691 TCL1AP56279 114 aa2.36□□□□□ -2.03
LIMA1-208ENST00000551691 TPPP2P59282 170 aa2.36□□□□□ -2.03
LIMA1-208ENST00000551691 ACTBP60709 375 aa2.36□□□□□ -2.03
LIMA1-208ENST00000551691 APOFQ13790 326 aa2.36□□□□□ -2.03
LIMA1-208ENST00000551691 SAPCD1Q5SSQ6 148 aa2.36□□□□□ -2.03
LIMA1-208ENST00000551691 CLVS2Q5SYC1 327 aa2.36□□□□□ -2.03
LIMA1-208ENST00000551691 LCE3AQ5TA76 89 aa2.36□□□□□ -2.03
LIMA1-208ENST00000551691 FAM222AQ5U5X8 452 aa2.36□□□□□ -2.03
LIMA1-208ENST00000551691 COMMD7Q86VX2 200 aa2.36□□□□□ -2.03
LIMA1-208ENST00000551691 ANGPTL5Q86XS5 388 aa2.36□□□□□ -2.03
LIMA1-208ENST00000551691 SLC35F6Q8N357 371 aa2.36□□□□□ -2.03
LIMA1-208ENST00000551691 OR2K2Q8NGT1 345 aa2.36□□□□□ -2.03
LIMA1-208ENST00000551691 ASB13Q8WXK3 278 aa2.36□□□□□ -2.03
LIMA1-208ENST00000551691 TAMM41Q96BW9 452 aa2.36□□□□□ -2.03
LIMA1-208ENST00000551691 TLCD1Q96CP7 247 aa2.36□□□□□ -2.03
LIMA1-208ENST00000551691 RNF5Q99942 180 aa2.36□□□□□ -2.03
LIMA1-208ENST00000551691 FAM103A1Q9BTL3 118 aaKnown RBP2.36□□□□□ -2.03
LIMA1-208ENST00000551691 SLC2A9Q9NRM0 540 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms