RNA–Protein interactions for RNA: ENST00000551425.1

PTCH1-222, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 241 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-222ENST00000551425 SP6Q3SY56 376 aa8.1□□□□□ -1.11
PTCH1-222ENST00000551425 ACY3Q96HD9 319 aa8.1□□□□□ -1.11
PTCH1-222ENST00000551425 C16orf92Q96LL3 132 aa8.1□□□□□ -1.11
PTCH1-222ENST00000551425 TP53RKQ96S44 253 aa8.1□□□□□ -1.11
PTCH1-222ENST00000551425 NUDT15Q9NV35 164 aa8.1□□□□□ -1.11
PTCH1-222ENST00000551425 TRAV12-2A0A075B6T6 113 aa8.09□□□□□ -1.11
PTCH1-222ENST00000551425 IGLV5-52A0A0A0MRZ9 124 aa8.09□□□□□ -1.11
PTCH1-222ENST00000551425 BOLA2-SMG1P6H3BVE0 249 aa8.09□□□□□ -1.11
PTCH1-222ENST00000551425 SFT2D2O95562 160 aa8.09□□□□□ -1.11
PTCH1-222ENST00000551425 OR4E1P0C645 316 aa8.09□□□□□ -1.11
PTCH1-222ENST00000551425 ANXA7P20073 488 aaKnown RBP8.09□□□□□ -1.11
PTCH1-222ENST00000551425 VAMP1P23763 118 aa8.09□□□□□ -1.11
PTCH1-222ENST00000551425 SRPXP78539 464 aa8.09□□□□□ -1.11
PTCH1-222ENST00000551425 PPP1R1AQ13522 171 aa8.09□□□□□ -1.11
PTCH1-222ENST00000551425 RGS21Q2M5E4 152 aa8.09□□□□□ -1.11
PTCH1-222ENST00000551425 C4orf46Q504U0 113 aa8.09□□□□□ -1.11
PTCH1-222ENST00000551425 OR8I2Q8N0Y5 310 aa8.09□□□□□ -1.11
PTCH1-222ENST00000551425 OR52E5Q8NH55 327 aa8.09□□□□□ -1.11
PTCH1-222ENST00000551425 GLYATL2Q8WU03 294 aa8.09□□□□□ -1.11
PTCH1-222ENST00000551425 TMEM263Q8WUH6 116 aaKnown RBP8.09□□□□□ -1.11
PTCH1-222ENST00000551425 TMEM170AQ8WVE7 144 aa8.09□□□□□ -1.11
PTCH1-222ENST00000551425 TMEM222Q9H0R3 208 aa8.09□□□□□ -1.11
PTCH1-222ENST00000551425 LRP1Q07954 4544 aaKnown RBP8.09□□□□□ -1.11
PTCH1-222ENST00000551425 A0A0G2JRQ6 117 aa8.08□□□□□ -1.12
PTCH1-222ENST00000551425 C9orf170A2RU37 121 aa8.08□□□□□ -1.12
PTCH1-222ENST00000551425 INMT-MINDY4F8WBC2 141 aa8.08□□□□□ -1.12
PTCH1-222ENST00000551425 NXPH4O95158 308 aa8.08□□□□□ -1.12
PTCH1-222ENST00000551425 CDS2O95674 445 aa8.08□□□□□ -1.12
PTCH1-222ENST00000551425 IL5P05113 134 aa8.08□□□□□ -1.12
PTCH1-222ENST00000551425 HTN1P15515 57 aa8.08□□□□□ -1.12
PTCH1-222ENST00000551425 LGI3Q8N145 548 aa8.08□□□□□ -1.12
PTCH1-222ENST00000551425 NTN5Q8WTR8 489 aaPredicted RBP8.08□□□□□ -1.12
PTCH1-222ENST00000551425 RBPMSQ93062 196 aaKnown RBP8.08□□□□□ -1.12
PTCH1-222ENST00000551425 IL22RA2Q969J5 263 aa8.08□□□□□ -1.12
PTCH1-222ENST00000551425 RRNAD1Q96FB5 475 aaKnown RBP8.08□□□□□ -1.12
PTCH1-222ENST00000551425 VSIG2Q96IQ7 327 aa8.08□□□□□ -1.12
PTCH1-222ENST00000551425 MARVELD1Q9BSK0 173 aa8.08□□□□□ -1.12
PTCH1-222ENST00000551425 HEYLQ9NQ87 328 aaPredicted RBP8.08□□□□□ -1.12
PTCH1-222ENST00000551425 FAM30AQ9NZY2 134 aa8.08□□□□□ -1.12
PTCH1-222ENST00000551425 TMEM56-RWDD3S4R434 201 aa8.08□□□□□ -1.12
PTCH1-222ENST00000551425 PRAF2O60831 178 aa8.07□□□□□ -1.12
PTCH1-222ENST00000551425 C1QBP02746 253 aa8.07□□□□□ -1.12
PTCH1-222ENST00000551425 GALR1P47211 349 aa8.07□□□□□ -1.12
PTCH1-222ENST00000551425 SELENOHQ8IZQ5 122 aaKnown RBP8.07□□□□□ -1.12
PTCH1-222ENST00000551425 LINC00528Q8N1L1 170 aa8.07□□□□□ -1.12
PTCH1-222ENST00000551425 RNASE11Q8TAA1 199 aaKnown RBP8.07□□□□□ -1.12
PTCH1-222ENST00000551425 SLC25A39Q9BZJ4 359 aaPredicted RBP8.07□□□□□ -1.12
PTCH1-222ENST00000551425 GPN1Q9HCN4 374 aaPredicted RBP8.07□□□□□ -1.12
PTCH1-222ENST00000551425 TRAV9-2A0A087WT02 112 aa8.06□□□□□ -1.12
PTCH1-222ENST00000551425 DUXBA0A1W2PPF3 345 aa8.06□□□□□ -1.12
PTCH1-222ENST00000551425 GAGE12BA1L429 117 aa8.06□□□□□ -1.12
PTCH1-222ENST00000551425 ZNF98A6NK75 572 aa8.06□□□□□ -1.12
PTCH1-222ENST00000551425 K7EP13 123 aa8.06□□□□□ -1.12
PTCH1-222ENST00000551425 GAGE7O76087 117 aa8.06□□□□□ -1.12
PTCH1-222ENST00000551425 RLN2P04090 185 aa8.06□□□□□ -1.12
PTCH1-222ENST00000551425 GAGE12FP0CL80 117 aa8.06□□□□□ -1.12
PTCH1-222ENST00000551425 GAGE12GP0CL81 117 aa8.06□□□□□ -1.12
PTCH1-222ENST00000551425 GAGE12IP0CL82 117 aa8.06□□□□□ -1.12
PTCH1-222ENST00000551425 LYZP61626 148 aa8.06□□□□□ -1.12
PTCH1-222ENST00000551425 ZNF90Q03938 601 aa8.06□□□□□ -1.12
PTCH1-222ENST00000551425 TMEM268Q5VZI3 342 aa8.06□□□□□ -1.12
PTCH1-222ENST00000551425 NOXA1Q86UR1 476 aa8.06□□□□□ -1.12
PTCH1-222ENST00000551425 FAM219AQ8IW50 185 aa8.06□□□□□ -1.12
PTCH1-222ENST00000551425 LRTM2Q8N967 370 aa8.06□□□□□ -1.12
PTCH1-222ENST00000551425 ZNF431Q8TF32 576 aaPredicted RBP8.06□□□□□ -1.12
PTCH1-222ENST00000551425 PPP1R14BQ96C90 147 aa8.06□□□□□ -1.12
PTCH1-222ENST00000551425 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.06□□□□□ -1.12
PTCH1-222ENST00000551425 MSRB1Q9NZV6 116 aa8.06□□□□□ -1.12
PTCH1-222ENST00000551425 IGKV1D-37A0A075B6S9 117 aa8.05□□□□□ -1.12
PTCH1-222ENST00000551425 A0A0B4J2A0 478 aa8.05□□□□□ -1.12
PTCH1-222ENST00000551425 ZFP92A6NM28 416 aa8.05□□□□□ -1.12
PTCH1-222ENST00000551425 SNRPGP15A8MWD9 76 aa8.05□□□□□ -1.12
PTCH1-222ENST00000551425 NPIPB6E9PJ23 425 aa8.05□□□□□ -1.12
PTCH1-222ENST00000551425 GAMTQ14353 236 aa8.05□□□□□ -1.12
PTCH1-222ENST00000551425 NMSQ5H8A3 153 aa8.05□□□□□ -1.12
PTCH1-222ENST00000551425 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.05□□□□□ -1.12
PTCH1-222ENST00000551425 LHFPL5Q8TAF8 219 aa8.05□□□□□ -1.12
PTCH1-222ENST00000551425 MITD1Q8WV92 249 aa8.05□□□□□ -1.12
PTCH1-222ENST00000551425 RSG1Q9BU20 258 aa8.05□□□□□ -1.12
PTCH1-222ENST00000551425 SLC25A32Q9H2D1 315 aa8.05□□□□□ -1.12
PTCH1-222ENST00000551425 TMPRSS5Q9H3S3 457 aa8.05□□□□□ -1.12
PTCH1-222ENST00000551425 PRR13Q9NZ81 148 aa8.05□□□□□ -1.12
PTCH1-222ENST00000551425 SHPKQ9UHJ6 478 aa8.05□□□□□ -1.12
PTCH1-222ENST00000551425 TRAV8-2A0A0B4J237 113 aa8.04□□□□□ -1.12
PTCH1-222ENST00000551425 H7BYZ3 331 aa8.04□□□□□ -1.12
PTCH1-222ENST00000551425 FABP1P07148 127 aa8.04□□□□□ -1.12
PTCH1-222ENST00000551425 LYZL2Q7Z4W2 148 aa8.04□□□□□ -1.12
PTCH1-222ENST00000551425 C12orf45Q8N5I9 185 aaPredicted RBP8.04□□□□□ -1.12
PTCH1-222ENST00000551425 OR4D5Q8NGN0 318 aa8.04□□□□□ -1.12
PTCH1-222ENST00000551425 SEC22CQ9BRL7 303 aa8.04□□□□□ -1.12
PTCH1-222ENST00000551425 LRCOL1A6NCL2 159 aa8.03□□□□□ -1.12
PTCH1-222ENST00000551425 CEBPZOSA8MTT3 80 aa8.03□□□□□ -1.12
PTCH1-222ENST00000551425 HOXB5P09067 269 aa8.03□□□□□ -1.12
PTCH1-222ENST00000551425 CDKN1BP46527 198 aa8.03□□□□□ -1.12
PTCH1-222ENST00000551425 RHOBP62745 196 aa8.03□□□□□ -1.12
PTCH1-222ENST00000551425 IGFL4Q6B9Z1 124 aa8.03□□□□□ -1.12
PTCH1-222ENST00000551425 Q6ZSA8 131 aa8.03□□□□□ -1.12
PTCH1-222ENST00000551425 RNF182Q8N6D2 247 aa8.03□□□□□ -1.12
PTCH1-222ENST00000551425 OR1B1Q8NGR6 318 aa8.03□□□□□ -1.12
PTCH1-222ENST00000551425 C20orf144Q9BQM9 153 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms