RNA–Protein interactions for RNA: ENST00000550267.1

VPS29-208, Transcript of VPS29, retromer complex component, humanhuman

TSL 2

Gene VPS29, Length 810 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-208ENST00000550267 PPP1R14DQ9NXH3 145 aa7.16□□□□□ -1.26
VPS29-208ENST00000550267 A0A087WTM6 91 aa7.15□□□□□ -1.26
VPS29-208ENST00000550267 ADAP1O75689 374 aa7.15□□□□□ -1.26
VPS29-208ENST00000550267 TEPPQ6URK8 271 aa7.15□□□□□ -1.26
VPS29-208ENST00000550267 THAP8Q8NA92 274 aa7.15□□□□□ -1.26
VPS29-208ENST00000550267 OR8A1Q8NGG7 326 aa7.15□□□□□ -1.26
VPS29-208ENST00000550267 OR4D5Q8NGN0 318 aa7.15□□□□□ -1.26
VPS29-208ENST00000550267 HSPB7Q9UBY9 170 aa7.15□□□□□ -1.26
VPS29-208ENST00000550267 C14orf166Q9Y224 244 aaKnown RBP7.15□□□□□ -1.26
VPS29-208ENST00000550267 TMEM56-RWDD3S4R434 201 aa7.15□□□□□ -1.26
VPS29-208ENST00000550267 HMCN2Q8NDA2 5059 aa7.15□□□□□ -1.27
VPS29-208ENST00000550267 A0A096LPF7 62 aa7.14□□□□□ -1.27
VPS29-208ENST00000550267 CRYM-AS1A6NIL9 109 aa7.14□□□□□ -1.27
VPS29-208ENST00000550267 RAB3DO95716 219 aa7.14□□□□□ -1.27
VPS29-208ENST00000550267 ORM2P19652 201 aa7.14□□□□□ -1.27
VPS29-208ENST00000550267 TBPP20226 339 aa7.14□□□□□ -1.27
VPS29-208ENST00000550267 GCSHP23434 173 aa7.14□□□□□ -1.27
VPS29-208ENST00000550267 GATA2P23769 480 aaPredicted RBP7.14□□□□□ -1.27
VPS29-208ENST00000550267 FLG2Q5D862 2391 aaPredicted RBP7.14□□□□□ -1.27
VPS29-208ENST00000550267 FAAP20Q6NZ36 180 aa7.14□□□□□ -1.27
VPS29-208ENST00000550267 VSIG2Q96IQ7 327 aa7.14□□□□□ -1.27
VPS29-208ENST00000550267 GPR82Q96P67 336 aa7.14□□□□□ -1.27
VPS29-208ENST00000550267 MTFP1Q9UDX5 166 aa7.14□□□□□ -1.27
VPS29-208ENST00000550267 CACFD1Q9UGQ2 172 aa7.14□□□□□ -1.27
VPS29-208ENST00000550267 SLC45A2Q9UMX9 530 aa7.14□□□□□ -1.27
VPS29-208ENST00000550267 SRRM2Q9UQ35 2752 aaKnown RBP7.14□□□□□ -1.27
VPS29-208ENST00000550267 FAM25AB3EWG3 89 aa7.13□□□□□ -1.27
VPS29-208ENST00000550267 FAM25CB3EWG5 89 aa7.13□□□□□ -1.27
VPS29-208ENST00000550267 FAM25GB3EWG6 89 aa7.13□□□□□ -1.27
VPS29-208ENST00000550267 H7BYZ3 331 aa7.13□□□□□ -1.27
VPS29-208ENST00000550267 NXPH4O95158 308 aa7.13□□□□□ -1.27
VPS29-208ENST00000550267 CFDP00746 253 aaPredicted RBP7.13□□□□□ -1.27
VPS29-208ENST00000550267 RLN2P04090 185 aa7.13□□□□□ -1.27
VPS29-208ENST00000550267 CDKN1BP46527 198 aa7.13□□□□□ -1.27
VPS29-208ENST00000550267 CCR6P51684 374 aa7.13□□□□□ -1.27
VPS29-208ENST00000550267 SMCO1Q147U7 214 aa7.13□□□□□ -1.27
VPS29-208ENST00000550267 GPR107Q5VW38 600 aa7.13□□□□□ -1.27
VPS29-208ENST00000550267 GGNBP1Q5YKI7 109 aa7.13□□□□□ -1.27
VPS29-208ENST00000550267 STEAP1BQ6NZ63 245 aa7.13□□□□□ -1.27
VPS29-208ENST00000550267 TMEM182Q6ZP80 229 aaPredicted RBP7.13□□□□□ -1.27
VPS29-208ENST00000550267 TMEM229BQ8NBD8 167 aa7.13□□□□□ -1.27
VPS29-208ENST00000550267 PARD6GQ9BYG4 376 aaPredicted RBP7.13□□□□□ -1.27
VPS29-208ENST00000550267 SNURFLB1AK76 121 aa7.12□□□□□ -1.27
VPS29-208ENST00000550267 H3BRN7 92 aa7.12□□□□□ -1.27
VPS29-208ENST00000550267 CXCL3P19876 107 aa7.12□□□□□ -1.27
VPS29-208ENST00000550267 ATP5IP56385 69 aaPredicted RBP7.12□□□□□ -1.27
VPS29-208ENST00000550267 TAS2R19P59542 299 aa7.12□□□□□ -1.27
VPS29-208ENST00000550267 PSG3Q16557 428 aa7.12□□□□□ -1.27
VPS29-208ENST00000550267 TMED4Q7Z7H5 227 aa7.12□□□□□ -1.27
VPS29-208ENST00000550267 NFE4Q86UQ8 179 aa7.12□□□□□ -1.27
VPS29-208ENST00000550267 CCDC28AQ8IWP9 274 aa7.12□□□□□ -1.27
VPS29-208ENST00000550267 BPIFCQ8NFQ6 507 aa7.12□□□□□ -1.27
VPS29-208ENST00000550267 IL22RA2Q969J5 263 aa7.12□□□□□ -1.27
VPS29-208ENST00000550267 YIPF6Q96EC8 236 aa7.12□□□□□ -1.27
VPS29-208ENST00000550267 TMEM147Q9BVK8 224 aa7.12□□□□□ -1.27
VPS29-208ENST00000550267 PAIP2BQ9ULR5 123 aaKnown RBP7.12□□□□□ -1.27
VPS29-208ENST00000550267 GPR132Q9UNW8 380 aa7.12□□□□□ -1.27
VPS29-208ENST00000550267 KRTAP29-1A8MX34 341 aaPredicted RBP7.11□□□□□ -1.27
VPS29-208ENST00000550267 IAPPP10997 89 aa7.11□□□□□ -1.27
VPS29-208ENST00000550267 NCS1P62166 190 aa7.11□□□□□ -1.27
VPS29-208ENST00000550267 RAB11AP62491 216 aa7.11□□□□□ -1.27
VPS29-208ENST00000550267 FHL2Q14192 279 aa7.11□□□□□ -1.27
VPS29-208ENST00000550267 GFI1BQ5VTD9 330 aa7.11□□□□□ -1.27
VPS29-208ENST00000550267 Q6ZTI0 123 aa7.11□□□□□ -1.27
VPS29-208ENST00000550267 LYZL2Q7Z4W2 148 aa7.11□□□□□ -1.27
VPS29-208ENST00000550267 OR1S1Q8NH92 325 aa7.11□□□□□ -1.27
VPS29-208ENST00000550267 C20orf144Q9BQM9 153 aa7.11□□□□□ -1.27
VPS29-208ENST00000550267 EXTL2Q9UBQ6 330 aa7.11□□□□□ -1.27
VPS29-208ENST00000550267 SURF2Q15527 256 aaPredicted RBP7.1□□□□□ -1.27
VPS29-208ENST00000550267 RPUSD4Q96CM3 377 aaKnown RBP7.1□□□□□ -1.27
VPS29-208ENST00000550267 SHANK2-AS3Q9BTD1 123 aa7.1□□□□□ -1.27
VPS29-208ENST00000550267 TMEM70Q9BUB7 260 aa7.1□□□□□ -1.27
VPS29-208ENST00000550267 Q9H521 79 aa7.1□□□□□ -1.27
VPS29-208ENST00000550267 DNAH8Q96JB1 4490 aa7.09□□□□□ -1.27
VPS29-208ENST00000550267 A0A087X0K7 114 aa7.09□□□□□ -1.27
VPS29-208ENST00000550267 A0A0B4J2A0 478 aa7.09□□□□□ -1.27
VPS29-208ENST00000550267 DISC1C4P0D8 188 aa7.09□□□□□ -1.27
VPS29-208ENST00000550267 PRSS46E5RG02 174 aa7.09□□□□□ -1.27
VPS29-208ENST00000550267 J3KRW8 73 aa7.09□□□□□ -1.27
VPS29-208ENST00000550267 AKR1C4P17516 323 aa7.09□□□□□ -1.27
VPS29-208ENST00000550267 RPL7P18124 248 aaKnown RBP7.09□□□□□ -1.27
VPS29-208ENST00000550267 S100A7P31151 101 aa7.09□□□□□ -1.27
VPS29-208ENST00000550267 VBP1P61758 197 aa7.09□□□□□ -1.27
VPS29-208ENST00000550267 LRRC20Q8TCA0 184 aa7.09□□□□□ -1.27
VPS29-208ENST00000550267 C11orf21Q9P2W6 132 aa7.09□□□□□ -1.27
VPS29-208ENST00000550267 SHPKQ9UHJ6 478 aa7.09□□□□□ -1.27
VPS29-208ENST00000550267 KCNIP3Q9Y2W7 256 aa7.09□□□□□ -1.27
VPS29-208ENST00000550267 TRGV2A0A075B6R0 118 aa7.08□□□□□ -1.28
VPS29-208ENST00000550267 IGLV5-52A0A0A0MRZ9 124 aa7.08□□□□□ -1.28
VPS29-208ENST00000550267 RAP2BP61225 183 aa7.08□□□□□ -1.28
VPS29-208ENST00000550267 AKR1C1Q04828 323 aa7.08□□□□□ -1.28
VPS29-208ENST00000550267 DAZ2Q13117 558 aaKnown RBP7.08□□□□□ -1.28
VPS29-208ENST00000550267 SERTAD4-AS1Q5TG53 156 aa7.08□□□□□ -1.28
VPS29-208ENST00000550267 MZT2AQ6P582 158 aa7.08□□□□□ -1.28
VPS29-208ENST00000550267 CCDC190Q86UF4 302 aa7.08□□□□□ -1.28
VPS29-208ENST00000550267 NUDT10Q8NFP7 164 aa7.08□□□□□ -1.28
VPS29-208ENST00000550267 NUDT11Q96G61 164 aa7.08□□□□□ -1.28
VPS29-208ENST00000550267 HIGD1AQ9Y241 93 aa7.08□□□□□ -1.28
VPS29-208ENST00000550267 ICOSQ9Y6W8 199 aa7.08□□□□□ -1.28
VPS29-208ENST00000550267 TRAV9-2A0A087WT02 112 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms