RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 SHANK2-AS3Q9BTD1 123 aa6.81□□□□□ -1.32
TRAFD1-207ENST00000550051 NOP10Q9NPE3 64 aaKnown RBP6.81□□□□□ -1.32
TRAFD1-207ENST00000550051 DNAH5Q8TE73 4624 aa6.8□□□□□ -1.32
TRAFD1-207ENST00000550051 TRAV26-1A0A087WT03 109 aa6.8□□□□□ -1.32
TRAFD1-207ENST00000550051 A0A087X0K7 114 aa6.8□□□□□ -1.32
TRAFD1-207ENST00000550051 H3BRN7 92 aa6.8□□□□□ -1.32
TRAFD1-207ENST00000550051 H3BS24 57 aa6.8□□□□□ -1.32
TRAFD1-207ENST00000550051 H7BYZ3 331 aa6.8□□□□□ -1.32
TRAFD1-207ENST00000550051 ZNF701M0R085 212 aaPredicted RBP6.8□□□□□ -1.32
TRAFD1-207ENST00000550051 SYNGR2O43760 224 aa6.8□□□□□ -1.32
TRAFD1-207ENST00000550051 IAPPP10997 89 aa6.8□□□□□ -1.32
TRAFD1-207ENST00000550051 HTN1P15515 57 aa6.8□□□□□ -1.32
TRAFD1-207ENST00000550051 CDKN1BP46527 198 aa6.8□□□□□ -1.32
TRAFD1-207ENST00000550051 FGL1Q08830 312 aa6.8□□□□□ -1.32
TRAFD1-207ENST00000550051 OR5I1Q13606 314 aa6.8□□□□□ -1.32
TRAFD1-207ENST00000550051 C4orf46Q504U0 113 aa6.8□□□□□ -1.32
TRAFD1-207ENST00000550051 TMEM128Q5BJH2 165 aa6.8□□□□□ -1.32
TRAFD1-207ENST00000550051 ACOT7LQ6ZUV0 252 aa6.8□□□□□ -1.32
TRAFD1-207ENST00000550051 UHRF2Q96PU4 802 aa6.8□□□□□ -1.32
TRAFD1-207ENST00000550051 PPP1R14DQ9NXH3 145 aa6.8□□□□□ -1.32
TRAFD1-207ENST00000550051 MRPS16Q9Y3D3 137 aaKnown RBP6.8□□□□□ -1.32
TRAFD1-207ENST00000550051 WRBO00258 174 aa6.79□□□□□ -1.32
TRAFD1-207ENST00000550051 HYPMO75409 117 aa6.79□□□□□ -1.32
TRAFD1-207ENST00000550051 INAFM2P0DMQ5 153 aa6.79□□□□□ -1.32
TRAFD1-207ENST00000550051 HOXA5P20719 270 aa6.79□□□□□ -1.32
TRAFD1-207ENST00000550051 RAP2BP61225 183 aa6.79□□□□□ -1.32
TRAFD1-207ENST00000550051 SELENOTP62341 195 aa6.79□□□□□ -1.32
TRAFD1-207ENST00000550051 HIST1H1AQ02539 215 aaPredicted RBP6.79□□□□□ -1.32
TRAFD1-207ENST00000550051 IL18Q14116 193 aa6.79□□□□□ -1.32
TRAFD1-207ENST00000550051 Q6ZRN7 208 aaPredicted RBP6.79□□□□□ -1.32
TRAFD1-207ENST00000550051 CYP2G1PQ6ZSU1 146 aa6.79□□□□□ -1.32
TRAFD1-207ENST00000550051 S100A7AQ86SG5 101 aa6.79□□□□□ -1.32
TRAFD1-207ENST00000550051 LYPD1Q8N2G4 141 aa6.79□□□□□ -1.32
TRAFD1-207ENST00000550051 DIRAS2Q96HU8 199 aa6.79□□□□□ -1.32
TRAFD1-207ENST00000550051 RSL24D1Q9UHA3 163 aaKnown RBP6.79□□□□□ -1.32
TRAFD1-207ENST00000550051 PAIP2BQ9ULR5 123 aaKnown RBP6.79□□□□□ -1.32
TRAFD1-207ENST00000550051 RNF24Q9Y225 148 aa6.79□□□□□ -1.32
TRAFD1-207ENST00000550051 HIGD1AQ9Y241 93 aa6.79□□□□□ -1.32
TRAFD1-207ENST00000550051 MRPS12O15235 138 aaKnown RBP6.78□□□□□ -1.32
TRAFD1-207ENST00000550051 IL5P05113 134 aa6.78□□□□□ -1.32
TRAFD1-207ENST00000550051 XGP55808 180 aa6.78□□□□□ -1.32
TRAFD1-207ENST00000550051 SPANXN5Q5MJ07 72 aa6.78□□□□□ -1.32
TRAFD1-207ENST00000550051 CCDC28AQ8IWP9 274 aa6.78□□□□□ -1.32
TRAFD1-207ENST00000550051 RPUSD4Q96CM3 377 aaKnown RBP6.78□□□□□ -1.32
TRAFD1-207ENST00000550051 SOSTQ9BQB4 213 aa6.78□□□□□ -1.32
TRAFD1-207ENST00000550051 MCUBQ9NWR8 336 aa6.78□□□□□ -1.32
TRAFD1-207ENST00000550051 ZNF586Q9NXT0 402 aa6.78□□□□□ -1.32
TRAFD1-207ENST00000550051 STRAPQ9Y3F4 350 aaKnown RBP6.78□□□□□ -1.32
TRAFD1-207ENST00000550051 A0A0J9YY99 117 aa6.77□□□□□ -1.33
TRAFD1-207ENST00000550051 K7EPK0 472 aa6.77□□□□□ -1.33
TRAFD1-207ENST00000550051 CXCL2P19875 107 aa6.77□□□□□ -1.33
TRAFD1-207ENST00000550051 DLK1P80370 383 aa6.77□□□□□ -1.33
TRAFD1-207ENST00000550051 AKR1C1Q04828 323 aa6.77□□□□□ -1.33
TRAFD1-207ENST00000550051 DAZ2Q13117 558 aaKnown RBP6.77□□□□□ -1.33
TRAFD1-207ENST00000550051 LRRC20Q8TCA0 184 aa6.77□□□□□ -1.33
TRAFD1-207ENST00000550051 C18orf15Q96N68 181 aa6.77□□□□□ -1.33
TRAFD1-207ENST00000550051 ZNF331Q9NQX6 463 aaPredicted RBP6.77□□□□□ -1.33
TRAFD1-207ENST00000550051 GAGE12BA1L429 117 aa6.76□□□□□ -1.33
TRAFD1-207ENST00000550051 PMS2P5A8MQ11 134 aa6.76□□□□□ -1.33
TRAFD1-207ENST00000550051 FNDC10F2Z333 226 aa6.76□□□□□ -1.33
TRAFD1-207ENST00000550051 GAGE7O76087 117 aa6.76□□□□□ -1.33
TRAFD1-207ENST00000550051 RLN2P04090 185 aa6.76□□□□□ -1.33
TRAFD1-207ENST00000550051 OR5G3P0C626 314 aa6.76□□□□□ -1.33
TRAFD1-207ENST00000550051 LINC00869P0C866 280 aa6.76□□□□□ -1.33
TRAFD1-207ENST00000550051 GAGE12FP0CL80 117 aa6.76□□□□□ -1.33
TRAFD1-207ENST00000550051 GAGE12GP0CL81 117 aa6.76□□□□□ -1.33
TRAFD1-207ENST00000550051 GAGE12IP0CL82 117 aa6.76□□□□□ -1.33
TRAFD1-207ENST00000550051 ANXA7P20073 488 aaKnown RBP6.76□□□□□ -1.33
TRAFD1-207ENST00000550051 LINC00315P59091 139 aa6.76□□□□□ -1.33
TRAFD1-207ENST00000550051 KIR3DS1Q14943 382 aa6.76□□□□□ -1.33
TRAFD1-207ENST00000550051 PXDC1Q5TGL8 231 aa6.76□□□□□ -1.33
TRAFD1-207ENST00000550051 PATE2Q6UY27 113 aa6.76□□□□□ -1.33
TRAFD1-207ENST00000550051 CCDC190Q86UF4 302 aa6.76□□□□□ -1.33
TRAFD1-207ENST00000550051 VSIG2Q96IQ7 327 aa6.76□□□□□ -1.33
TRAFD1-207ENST00000550051 SLC25A21Q9BQT8 299 aaPredicted RBP6.76□□□□□ -1.33
TRAFD1-207ENST00000550051 NPVFQ9HCQ7 196 aa6.76□□□□□ -1.33
TRAFD1-207ENST00000550051 PTTG2Q9NZH5 202 aa6.76□□□□□ -1.33
TRAFD1-207ENST00000550051 HERC1Q15751 4861 aa6.76□□□□□ -1.33
TRAFD1-207ENST00000550051 A0A096LPF7 62 aa6.75□□□□□ -1.33
TRAFD1-207ENST00000550051 SNURFLB1AK76 121 aa6.75□□□□□ -1.33
TRAFD1-207ENST00000550051 SFT2D2O95562 160 aa6.75□□□□□ -1.33
TRAFD1-207ENST00000550051 SMIM18P0DKX4 95 aa6.75□□□□□ -1.33
TRAFD1-207ENST00000550051 FAUP35544 74 aaKnown RBP6.75□□□□□ -1.33
TRAFD1-207ENST00000550051 SPCS2Q15005 226 aa6.75□□□□□ -1.33
TRAFD1-207ENST00000550051 GFI1BQ5VTD9 330 aa6.75□□□□□ -1.33
TRAFD1-207ENST00000550051 TMED4Q7Z7H5 227 aa6.75□□□□□ -1.33
TRAFD1-207ENST00000550051 ZBTB8BQ8NAP8 495 aaPredicted RBP6.75□□□□□ -1.33
TRAFD1-207ENST00000550051 DYNC2LI1Q8TCX1 351 aa6.75□□□□□ -1.33
TRAFD1-207ENST00000550051 SMIM8Q96KF7 97 aa6.75□□□□□ -1.33
TRAFD1-207ENST00000550051 PYGO2Q9BRQ0 406 aa6.75□□□□□ -1.33
TRAFD1-207ENST00000550051 SLC50A1Q9BRV3 221 aa6.75□□□□□ -1.33
TRAFD1-207ENST00000550051 ARL6Q9H0F7 186 aa6.75□□□□□ -1.33
TRAFD1-207ENST00000550051 DMBT1Q9UGM3 2413 aaPredicted RBP6.74□□□□□ -1.33
TRAFD1-207ENST00000550051 FABP12A6NFH5 140 aa6.74□□□□□ -1.33
TRAFD1-207ENST00000550051 H3BP45 60 aa6.74□□□□□ -1.33
TRAFD1-207ENST00000550051 SIVA1O15304 175 aa6.74□□□□□ -1.33
TRAFD1-207ENST00000550051 HOXB5P09067 269 aa6.74□□□□□ -1.33
TRAFD1-207ENST00000550051 TNFSF8P32971 234 aa6.74□□□□□ -1.33
TRAFD1-207ENST00000550051 LCN15Q6UWW0 184 aa6.74□□□□□ -1.33
TRAFD1-207ENST00000550051 ODF3Q96PU9 254 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms