RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 RNASE8Q8TDE3 154 aaKnown RBP10.71□□□□□ -0.69
RAB5C-205ENST00000550013 Q9H8V8 135 aa10.71□□□□□ -0.69
RAB5C-205ENST00000550013 ADAP1O75689 374 aa10.7□□□□□ -0.7
RAB5C-205ENST00000550013 CDKN1BP46527 198 aa10.7□□□□□ -0.7
RAB5C-205ENST00000550013 TMBIM6P55061 237 aa10.7□□□□□ -0.7
RAB5C-205ENST00000550013 RRAS2P62070 204 aaPredicted RBP10.7□□□□□ -0.7
RAB5C-205ENST00000550013 POLR2GP62487 172 aaKnown RBP eCLIP10.7□□□□□ -0.7
RAB5C-205ENST00000550013 OR5I1Q13606 314 aa10.7□□□□□ -0.7
RAB5C-205ENST00000550013 PYDC2Q56P42 97 aa10.7□□□□□ -0.7
RAB5C-205ENST00000550013 PATE2Q6UY27 113 aa10.7□□□□□ -0.7
RAB5C-205ENST00000550013 MCFD2Q8NI22 146 aa10.7□□□□□ -0.7
RAB5C-205ENST00000550013 TMEM263Q8WUH6 116 aaKnown RBP10.7□□□□□ -0.7
RAB5C-205ENST00000550013 RPUSD4Q96CM3 377 aaKnown RBP10.7□□□□□ -0.7
RAB5C-205ENST00000550013 PARD6GQ9BYG4 376 aaPredicted RBP10.7□□□□□ -0.7
RAB5C-205ENST00000550013 TRAV26-1A0A087WT03 109 aa10.69□□□□□ -0.7
RAB5C-205ENST00000550013 A0A0J9YY99 117 aa10.69□□□□□ -0.7
RAB5C-205ENST00000550013 PMS2P5A8MQ11 134 aa10.69□□□□□ -0.7
RAB5C-205ENST00000550013 MRPS12O15235 138 aaKnown RBP10.69□□□□□ -0.7
RAB5C-205ENST00000550013 SNRPCP09234 159 aaKnown RBP10.69□□□□□ -0.7
RAB5C-205ENST00000550013 AP3S2P59780 193 aa10.69□□□□□ -0.7
RAB5C-205ENST00000550013 KRTAP10-2P60368 255 aa10.69□□□□□ -0.7
RAB5C-205ENST00000550013 ZNF493Q6ZR52 646 aa10.69□□□□□ -0.7
RAB5C-205ENST00000550013 GNPNAT1Q96EK6 184 aaPredicted RBP10.69□□□□□ -0.7
RAB5C-205ENST00000550013 BCL7BQ9BQE9 202 aa10.69□□□□□ -0.7
RAB5C-205ENST00000550013 SLC25A21Q9BQT8 299 aaPredicted RBP10.69□□□□□ -0.7
RAB5C-205ENST00000550013 ARL6Q9H0F7 186 aa10.69□□□□□ -0.7
RAB5C-205ENST00000550013 SCRT2Q9NQ03 307 aa10.69□□□□□ -0.7
RAB5C-205ENST00000550013 PSENENQ9NZ42 101 aa10.69□□□□□ -0.7
RAB5C-205ENST00000550013 H3BMQ9 156 aa10.68□□□□□ -0.7
RAB5C-205ENST00000550013 SSSCA1O60232 199 aa10.68□□□□□ -0.7
RAB5C-205ENST00000550013 HOXA5P20719 270 aa10.68□□□□□ -0.7
RAB5C-205ENST00000550013 SELENOTP62341 195 aa10.68□□□□□ -0.7
RAB5C-205ENST00000550013 ID3Q02535 119 aa10.68□□□□□ -0.7
RAB5C-205ENST00000550013 LINC00612Q8N6U2 182 aa10.68□□□□□ -0.7
RAB5C-205ENST00000550013 OR10J6PQ8NGY7 276 aa10.68□□□□□ -0.7
RAB5C-205ENST00000550013 RXFP4Q8TDU9 374 aa10.68□□□□□ -0.7
RAB5C-205ENST00000550013 HERC1Q15751 4861 aa10.67□□□□□ -0.7
RAB5C-205ENST00000550013 PRAC2D3DTV9 90 aa10.67□□□□□ -0.7
RAB5C-205ENST00000550013 H7BYZ3 331 aa10.67□□□□□ -0.7
RAB5C-205ENST00000550013 ZNF701M0R085 212 aaPredicted RBP10.67□□□□□ -0.7
RAB5C-205ENST00000550013 ANXA7P20073 488 aaKnown RBP10.67□□□□□ -0.7
RAB5C-205ENST00000550013 M6PRP20645 277 aa10.67□□□□□ -0.7
RAB5C-205ENST00000550013 DLK1P80370 383 aa10.67□□□□□ -0.7
RAB5C-205ENST00000550013 SLC38A11Q08AI6 406 aa10.67□□□□□ -0.7
RAB5C-205ENST00000550013 ESRGQ1W209 222 aa10.67□□□□□ -0.7
RAB5C-205ENST00000550013 TTC32Q5I0X7 151 aa10.67□□□□□ -0.7
RAB5C-205ENST00000550013 ARV1Q9H2C2 271 aa10.67□□□□□ -0.7
RAB5C-205ENST00000550013 Q9H3A6 140 aa10.67□□□□□ -0.7
RAB5C-205ENST00000550013 V9GYH0 126 aa10.67□□□□□ -0.7
RAB5C-205ENST00000550013 GAGE12BA1L429 117 aa10.66□□□□□ -0.7
RAB5C-205ENST00000550013 H3BTX0 84 aa10.66□□□□□ -0.7
RAB5C-205ENST00000550013 GAGE7O76087 117 aa10.66□□□□□ -0.7
RAB5C-205ENST00000550013 METTL15P1P0C7V9 234 aa10.66□□□□□ -0.7
RAB5C-205ENST00000550013 GAGE12FP0CL80 117 aa10.66□□□□□ -0.7
RAB5C-205ENST00000550013 GAGE12GP0CL81 117 aa10.66□□□□□ -0.7
RAB5C-205ENST00000550013 GAGE12IP0CL82 117 aa10.66□□□□□ -0.7
RAB5C-205ENST00000550013 GFI1BQ5VTD9 330 aa10.66□□□□□ -0.7
RAB5C-205ENST00000550013 SMIM8Q96KF7 97 aa10.66□□□□□ -0.7
RAB5C-205ENST00000550013 ZNF331Q9NQX6 463 aaPredicted RBP10.66□□□□□ -0.7
RAB5C-205ENST00000550013 C9orf170A2RU37 121 aa10.65□□□□□ -0.7
RAB5C-205ENST00000550013 K7EPK0 472 aa10.65□□□□□ -0.7
RAB5C-205ENST00000550013 SLC17A3O00476 420 aa10.65□□□□□ -0.7
RAB5C-205ENST00000550013 CXCL2P19875 107 aa10.65□□□□□ -0.7
RAB5C-205ENST00000550013 LCN15Q6UWW0 184 aa10.65□□□□□ -0.7
RAB5C-205ENST00000550013 TMEM14EPQ6UXP3 125 aa10.65□□□□□ -0.7
RAB5C-205ENST00000550013 S100A7AQ86SG5 101 aa10.65□□□□□ -0.7
RAB5C-205ENST00000550013 ZNF503Q96F45 646 aa10.65□□□□□ -0.7
RAB5C-205ENST00000550013 C20orf144Q9BQM9 153 aa10.65□□□□□ -0.7
RAB5C-205ENST00000550013 UPK3BQ9BT76 320 aa10.65□□□□□ -0.7
RAB5C-205ENST00000550013 NPVFQ9HCQ7 196 aa10.65□□□□□ -0.7
RAB5C-205ENST00000550013 J3KRW8 73 aa10.64□□□□□ -0.71
RAB5C-205ENST00000550013 NOL3O60936 208 aaKnown RBP10.64□□□□□ -0.71
RAB5C-205ENST00000550013 RLN2P04090 185 aa10.64□□□□□ -0.71
RAB5C-205ENST00000550013 UBE2MP61081 183 aaKnown RBP10.64□□□□□ -0.71
RAB5C-205ENST00000550013 MORN5Q5VZ52 161 aa10.64□□□□□ -0.71
RAB5C-205ENST00000550013 TEPPQ6URK8 271 aa10.64□□□□□ -0.71
RAB5C-205ENST00000550013 LINC00305Q7Z4B0 112 aa10.64□□□□□ -0.71
RAB5C-205ENST00000550013 CCDC190Q86UF4 302 aa10.64□□□□□ -0.71
RAB5C-205ENST00000550013 CCDC28AQ8IWP9 274 aa10.64□□□□□ -0.71
RAB5C-205ENST00000550013 ZBTB8BQ8NAP8 495 aaPredicted RBP10.64□□□□□ -0.71
RAB5C-205ENST00000550013 SLC50A1Q9BRV3 221 aa10.64□□□□□ -0.71
RAB5C-205ENST00000550013 ZNF586Q9NXT0 402 aa10.64□□□□□ -0.71
RAB5C-205ENST00000550013 MGAT4CQ9UBM8 478 aa10.64□□□□□ -0.71
RAB5C-205ENST00000550013 MRPS16Q9Y3D3 137 aaKnown RBP10.64□□□□□ -0.71
RAB5C-205ENST00000550013 FNDC10F2Z333 226 aa10.63□□□□□ -0.71
RAB5C-205ENST00000550013 GOSR2O14653 212 aa10.63□□□□□ -0.71
RAB5C-205ENST00000550013 BTF3P20290 206 aaKnown RBP10.63□□□□□ -0.71
RAB5C-205ENST00000550013 ARL16Q0P5N6 197 aa10.63□□□□□ -0.71
RAB5C-205ENST00000550013 OR10P1Q8NGE3 313 aa10.63□□□□□ -0.71
RAB5C-205ENST00000550013 DEDD2Q8WXF8 326 aa10.63□□□□□ -0.71
RAB5C-205ENST00000550013 TMPRSS5Q9H3S3 457 aa10.63□□□□□ -0.71
RAB5C-205ENST00000550013 FLVCR2Q9UPI3 526 aa10.63□□□□□ -0.71
RAB5C-205ENST00000550013 LINC00854A0A1B0GVQ3 168 aa10.62□□□□□ -0.71
RAB5C-205ENST00000550013 A0A1W2PPQ1 181 aa10.62□□□□□ -0.71
RAB5C-205ENST00000550013 SNURFLB1AK76 121 aa10.62□□□□□ -0.71
RAB5C-205ENST00000550013 AGPAT2O15120 278 aa10.62□□□□□ -0.71
RAB5C-205ENST00000550013 SCGB1D2O95969 90 aa10.62□□□□□ -0.71
RAB5C-205ENST00000550013 PXDC1Q5TGL8 231 aa10.62□□□□□ -0.71
RAB5C-205ENST00000550013 Q6ZTI0 123 aa10.62□□□□□ -0.71
RAB5C-205ENST00000550013 ZNF546Q86UE3 836 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 384.2 ms