RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 BLNKQ8WV28 456 aa13.18□□□□□ -0.3
LETMD1-220ENST00000549686 TCEAL7Q9BRU2 100 aa13.18□□□□□ -0.3
LETMD1-220ENST00000549686 SLC50A1Q9BRV3 221 aa13.18□□□□□ -0.3
LETMD1-220ENST00000549686 EIF5A2Q9GZV4 153 aaKnown RBP13.18□□□□□ -0.3
LETMD1-220ENST00000549686 CLEC5AQ9NY25 188 aa13.18□□□□□ -0.3
LETMD1-220ENST00000549686 SMAD5-AS1Q9Y6J3 95 aa13.18□□□□□ -0.3
LETMD1-220ENST00000549686 FAM74A7A6NL05 159 aa13.17□□□□□ -0.3
LETMD1-220ENST00000549686 PAGE4O60829 102 aa13.17□□□□□ -0.3
LETMD1-220ENST00000549686 HAGHQ16775 308 aa13.17□□□□□ -0.3
LETMD1-220ENST00000549686 TOR2AQ5JU69 321 aa13.17□□□□□ -0.3
LETMD1-220ENST00000549686 FAM90A2PQ658T7 463 aa13.17□□□□□ -0.3
LETMD1-220ENST00000549686 NRN1Q9NPD7 142 aa13.17□□□□□ -0.3
LETMD1-220ENST00000549686 TRAV25A0A0B4J276 109 aa13.16□□□□□ -0.3
LETMD1-220ENST00000549686 RIPPLY3P57055 190 aa13.16□□□□□ -0.3
LETMD1-220ENST00000549686 UBE2G2P60604 165 aa13.16□□□□□ -0.3
LETMD1-220ENST00000549686 RPL11P62913 178 aaKnown RBP13.16□□□□□ -0.3
LETMD1-220ENST00000549686 MEF2BQ02080 365 aaPredicted RBP13.16□□□□□ -0.3
LETMD1-220ENST00000549686 CST9LP1Q5W188 147 aa13.16□□□□□ -0.3
LETMD1-220ENST00000549686 ADAMTSL5Q6ZMM2 481 aa13.16□□□□□ -0.3
LETMD1-220ENST00000549686 AAMDCQ9H7C9 122 aa13.16□□□□□ -0.3
LETMD1-220ENST00000549686 OTORQ9NRC9 128 aa13.16□□□□□ -0.3
LETMD1-220ENST00000549686 MLXQ9UH92 298 aa13.16□□□□□ -0.3
LETMD1-220ENST00000549686 TRAV2A0A0B4J234 112 aa13.15□□□□□ -0.3
LETMD1-220ENST00000549686 C11orf94C9JXX5 98 aa13.15□□□□□ -0.3
LETMD1-220ENST00000549686 EDN2P20800 178 aa13.15□□□□□ -0.3
LETMD1-220ENST00000549686 RANP62826 216 aaKnown RBP13.15□□□□□ -0.3
LETMD1-220ENST00000549686 PAFAH1B2P68402 229 aa13.15□□□□□ -0.3
LETMD1-220ENST00000549686 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.15□□□□□ -0.3
LETMD1-220ENST00000549686 ARL6IP6Q8N6S5 226 aa13.15□□□□□ -0.3
LETMD1-220ENST00000549686 OR2K2Q8NGT1 345 aa13.15□□□□□ -0.3
LETMD1-220ENST00000549686 MCRIP2Q9BUT9 160 aaKnown RBP13.15□□□□□ -0.3
LETMD1-220ENST00000549686 YTHDF2Q9Y5A9 579 aaKnown RBP13.15□□□□□ -0.3
LETMD1-220ENST00000549686 PDE6DO43924 150 aa13.14□□□□□ -0.31
LETMD1-220ENST00000549686 NDUFB4O95168 129 aa13.14□□□□□ -0.31
LETMD1-220ENST00000549686 INSL3P51460 131 aa13.14□□□□□ -0.31
LETMD1-220ENST00000549686 ICAM4Q14773 271 aa13.14□□□□□ -0.31
LETMD1-220ENST00000549686 DEFB114Q30KQ6 69 aa13.14□□□□□ -0.31
LETMD1-220ENST00000549686 RBPMS2Q6ZRY4 209 aaKnown RBP13.14□□□□□ -0.31
LETMD1-220ENST00000549686 Q9H3A6 140 aa13.14□□□□□ -0.31
LETMD1-220ENST00000549686 ZNF331Q9NQX6 463 aaPredicted RBP13.14□□□□□ -0.31
LETMD1-220ENST00000549686 PRELID1Q9Y255 219 aa13.14□□□□□ -0.31
LETMD1-220ENST00000549686 F6UZH7 168 aa13.13□□□□□ -0.31
LETMD1-220ENST00000549686 TSPAN4O14817 238 aa13.13□□□□□ -0.31
LETMD1-220ENST00000549686 SAP30O75446 220 aa13.13□□□□□ -0.31
LETMD1-220ENST00000549686 ID1P41134 155 aa13.13□□□□□ -0.31
LETMD1-220ENST00000549686 RXFP4Q8TDU9 374 aa13.13□□□□□ -0.31
LETMD1-220ENST00000549686 C17orf77Q96MU5 243 aa13.13□□□□□ -0.31
LETMD1-220ENST00000549686 RARRES2Q99969 163 aa13.13□□□□□ -0.31
LETMD1-220ENST00000549686 GGTLC3B5MD39 225 aa13.12□□□□□ -0.31
LETMD1-220ENST00000549686 TMEM250H0YL14 139 aa13.12□□□□□ -0.31
LETMD1-220ENST00000549686 H3BTX0 84 aa13.12□□□□□ -0.31
LETMD1-220ENST00000549686 ISLRO14498 428 aa13.12□□□□□ -0.31
LETMD1-220ENST00000549686 SNRPCP09234 159 aaKnown RBP13.12□□□□□ -0.31
LETMD1-220ENST00000549686 SUMO1P63165 101 aaKnown RBP13.12□□□□□ -0.31
LETMD1-220ENST00000549686 CCDC28AQ8IWP9 274 aa13.12□□□□□ -0.31
LETMD1-220ENST00000549686 C5orf17Q8NAS9 161 aa13.12□□□□□ -0.31
LETMD1-220ENST00000549686 WFDC9Q8NEX5 89 aa13.12□□□□□ -0.31
LETMD1-220ENST00000549686 CMTM2Q8TAZ6 248 aa13.12□□□□□ -0.31
LETMD1-220ENST00000549686 MRPL53Q96EL3 112 aaKnown RBP13.12□□□□□ -0.31
LETMD1-220ENST00000549686 C16orf92Q96LL3 132 aa13.12□□□□□ -0.31
LETMD1-220ENST00000549686 TREM1Q9NP99 234 aa13.12□□□□□ -0.31
LETMD1-220ENST00000549686 PGPA6NDG6 321 aa13.11□□□□□ -0.31
LETMD1-220ENST00000549686 DNASE2O00115 360 aaPredicted RBP13.11□□□□□ -0.31
LETMD1-220ENST00000549686 SLC17A3O00476 420 aa13.11□□□□□ -0.31
LETMD1-220ENST00000549686 CSN1S1P47710 185 aa13.11□□□□□ -0.31
LETMD1-220ENST00000549686 ATP5G3P48201 142 aa13.11□□□□□ -0.31
LETMD1-220ENST00000549686 CD81P60033 236 aa13.11□□□□□ -0.31
LETMD1-220ENST00000549686 C9orf66Q5T8R8 295 aa13.11□□□□□ -0.31
LETMD1-220ENST00000549686 HIST1H2BAQ96A08 127 aa13.11□□□□□ -0.31
LETMD1-220ENST00000549686 RPUSD4Q96CM3 377 aaKnown RBP13.11□□□□□ -0.31
LETMD1-220ENST00000549686 SPAG8Q99932 426 aaPredicted RBP13.11□□□□□ -0.31
LETMD1-220ENST00000549686 SLC35B3Q9H1N7 401 aa13.11□□□□□ -0.31
LETMD1-220ENST00000549686 MS4A6AQ9H2W1 248 aa13.11□□□□□ -0.31
LETMD1-220ENST00000549686 FBN1P35555 2871 aaKnown RBP13.1□□□□□ -0.31
LETMD1-220ENST00000549686 SERTM2A0A1B0GWG4 89 aa13.1□□□□□ -0.31
LETMD1-220ENST00000549686 SOCS3O14543 225 aa13.1□□□□□ -0.31
LETMD1-220ENST00000549686 IGLV1-51P01701 117 aa13.1□□□□□ -0.31
LETMD1-220ENST00000549686 SLC25A5P05141 298 aaKnown RBP13.1□□□□□ -0.31
LETMD1-220ENST00000549686 CD33P20138 364 aa13.1□□□□□ -0.31
LETMD1-220ENST00000549686 CD300EQ496F6 205 aaPredicted RBP13.1□□□□□ -0.31
LETMD1-220ENST00000549686 DCANP1Q8TF63 244 aa13.1□□□□□ -0.31
LETMD1-220ENST00000549686 C11orf52Q96A22 123 aa13.1□□□□□ -0.31
LETMD1-220ENST00000549686 OR4C46A6NHA9 309 aa13.09□□□□□ -0.31
LETMD1-220ENST00000549686 K7EQG2 157 aa13.09□□□□□ -0.31
LETMD1-220ENST00000549686 SRP19P09132 144 aaKnown RBP13.09□□□□□ -0.31
LETMD1-220ENST00000549686 SNRPD3P62318 126 aaKnown RBP13.09□□□□□ -0.31
LETMD1-220ENST00000549686 LCN12Q6JVE5 192 aa13.09□□□□□ -0.31
LETMD1-220ENST00000549686 TMEM61Q8N0U2 210 aa13.09□□□□□ -0.31
LETMD1-220ENST00000549686 EXOC3-AS1Q8N2X6 119 aa13.09□□□□□ -0.31
LETMD1-220ENST00000549686 GPR61Q9BZJ8 451 aa13.09□□□□□ -0.31
LETMD1-220ENST00000549686 EPDR1Q9UM22 224 aa13.09□□□□□ -0.31
LETMD1-220ENST00000549686 IGKV3-7A0A075B6H7 116 aa13.08□□□□□ -0.32
LETMD1-220ENST00000549686 TRAV8-2A0A0B4J237 113 aa13.08□□□□□ -0.32
LETMD1-220ENST00000549686 SRSF3P84103 164 aaKnown RBP13.08□□□□□ -0.32
LETMD1-220ENST00000549686 SLC7A5P1Q8MH63 180 aa13.08□□□□□ -0.32
LETMD1-220ENST00000549686 ATG101Q9BSB4 218 aa13.08□□□□□ -0.32
LETMD1-220ENST00000549686 WNK1Q9H4A3 2382 aa13.07□□□□□ -0.32
LETMD1-220ENST00000549686 FBLL1A6NHQ2 334 aaKnown RBP13.07□□□□□ -0.32
LETMD1-220ENST00000549686 K7EQM0 130 aa13.07□□□□□ -0.32
LETMD1-220ENST00000549686 PSG3Q16557 428 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms