RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 A0A1W2PRE2 83 aa13.19□□□□□ -0.3
HDAC7-227ENST00000548080 F8W036 122 aa13.19□□□□□ -0.3
HDAC7-227ENST00000548080 MRPS12O15235 138 aaKnown RBP13.19□□□□□ -0.3
HDAC7-227ENST00000548080 ZNF207O43670 478 aaKnown RBP13.19□□□□□ -0.3
HDAC7-227ENST00000548080 SAP30O75446 220 aa13.19□□□□□ -0.3
HDAC7-227ENST00000548080 HIST1H1EP10412 219 aaKnown RBP13.19□□□□□ -0.3
HDAC7-227ENST00000548080 KLF5Q13887 457 aaPredicted RBP13.19□□□□□ -0.3
HDAC7-227ENST00000548080 ZNF320A2RRD8 509 aa13.18□□□□□ -0.3
HDAC7-227ENST00000548080 BUB3O43684 328 aa13.18□□□□□ -0.3
HDAC7-227ENST00000548080 RPL7P18124 248 aaKnown RBP13.18□□□□□ -0.3
HDAC7-227ENST00000548080 EDN2P20800 178 aa13.18□□□□□ -0.3
HDAC7-227ENST00000548080 ATP5G3P48201 142 aa13.18□□□□□ -0.3
HDAC7-227ENST00000548080 C1orf194Q5T5A4 169 aa13.18□□□□□ -0.3
HDAC7-227ENST00000548080 OR8I2Q8N0Y5 310 aa13.18□□□□□ -0.3
HDAC7-227ENST00000548080 MCRIP2Q9BUT9 160 aaKnown RBP13.18□□□□□ -0.3
HDAC7-227ENST00000548080 SEC11CQ9BY50 192 aa13.18□□□□□ -0.3
HDAC7-227ENST00000548080 TMEM250H0YL14 139 aa13.17□□□□□ -0.3
HDAC7-227ENST00000548080 H3BQ15 152 aa13.17□□□□□ -0.3
HDAC7-227ENST00000548080 K7EMT4 169 aa13.17□□□□□ -0.3
HDAC7-227ENST00000548080 PDE6DO43924 150 aa13.17□□□□□ -0.3
HDAC7-227ENST00000548080 SOHLH1Q5JUK2 328 aa13.17□□□□□ -0.3
HDAC7-227ENST00000548080 C10orf91Q5T1B1 145 aa13.17□□□□□ -0.3
HDAC7-227ENST00000548080 C9orf66Q5T8R8 295 aa13.17□□□□□ -0.3
HDAC7-227ENST00000548080 CYB561D1Q8N8Q1 229 aa13.17□□□□□ -0.3
HDAC7-227ENST00000548080 BLNKQ8WV28 456 aa13.17□□□□□ -0.3
HDAC7-227ENST00000548080 GPR82Q96P67 336 aa13.17□□□□□ -0.3
HDAC7-227ENST00000548080 NKX6-2Q9C056 277 aaPredicted RBP13.17□□□□□ -0.3
HDAC7-227ENST00000548080 ZNF586Q9NXT0 402 aa13.17□□□□□ -0.3
HDAC7-227ENST00000548080 F6UZH7 168 aa13.16□□□□□ -0.3
HDAC7-227ENST00000548080 APOHP02749 345 aaPredicted RBP13.16□□□□□ -0.3
HDAC7-227ENST00000548080 SNRPCP09234 159 aaKnown RBP13.16□□□□□ -0.3
HDAC7-227ENST00000548080 IGLC2P0DOY2 106 aa13.16□□□□□ -0.3
HDAC7-227ENST00000548080 ADCYAP1P18509 176 aa13.16□□□□□ -0.3
HDAC7-227ENST00000548080 CEBPGP53567 150 aa13.16□□□□□ -0.3
HDAC7-227ENST00000548080 KPRPQ5T749 579 aaPredicted RBP13.16□□□□□ -0.3
HDAC7-227ENST00000548080 UFC1Q9Y3C8 167 aa13.16□□□□□ -0.3
HDAC7-227ENST00000548080 SELENOKQ9Y6D0 94 aa13.16□□□□□ -0.3
HDAC7-227ENST00000548080 IGHV3-49A0A0A0MS15 119 aa13.16□□□□□ -0.3
HDAC7-227ENST00000548080 OR9G4Q8NGQ1 327 aa13.16□□□□□ -0.3
HDAC7-227ENST00000548080 DAZ1Q9NQZ3 744 aaKnown RBP13.16□□□□□ -0.3
HDAC7-227ENST00000548080 CARHSP1Q9Y2V2 147 aaKnown RBP13.16□□□□□ -0.3
HDAC7-227ENST00000548080 TRBV19A0A075B6N1 114 aa13.15□□□□□ -0.3
HDAC7-227ENST00000548080 IGHV3OR16-13A0A075B7E8 117 aa13.15□□□□□ -0.3
HDAC7-227ENST00000548080 IGHV3-74A0A0B4J1X5 117 aa13.15□□□□□ -0.3
HDAC7-227ENST00000548080 IGHV3-66A0A0C4DH42 116 aa13.15□□□□□ -0.3
HDAC7-227ENST00000548080 A0A1W2PS18 150 aa13.15□□□□□ -0.3
HDAC7-227ENST00000548080 H3BTX0 84 aa13.15□□□□□ -0.3
HDAC7-227ENST00000548080 LGALS9O00182 355 aa13.15□□□□□ -0.3
HDAC7-227ENST00000548080 RANP62826 216 aaKnown RBP13.15□□□□□ -0.3
HDAC7-227ENST00000548080 SUMO1P63165 101 aaKnown RBP13.15□□□□□ -0.3
HDAC7-227ENST00000548080 TM4SF20Q53R12 229 aa13.15□□□□□ -0.3
HDAC7-227ENST00000548080 C16orf54Q6UWD8 224 aa13.15□□□□□ -0.3
HDAC7-227ENST00000548080 REC114Q7Z4M0 266 aa13.15□□□□□ -0.3
HDAC7-227ENST00000548080 CCDC28AQ8IWP9 274 aa13.15□□□□□ -0.3
HDAC7-227ENST00000548080 IGHV7-4-1A0A0J9YVY3 117 aa13.14□□□□□ -0.31
HDAC7-227ENST00000548080 GGTLC3B5MD39 225 aa13.14□□□□□ -0.31
HDAC7-227ENST00000548080 ATF4P18848 351 aaPredicted RBP13.14□□□□□ -0.31
HDAC7-227ENST00000548080 GALR1P47211 349 aa13.14□□□□□ -0.31
HDAC7-227ENST00000548080 GRAMD2BQ96HH9 432 aa13.14□□□□□ -0.31
HDAC7-227ENST00000548080 ELOVL1Q9BW60 279 aa13.14□□□□□ -0.31
HDAC7-227ENST00000548080 GPR61Q9BZJ8 451 aa13.14□□□□□ -0.31
HDAC7-227ENST00000548080 AURKAIP1Q9NWT8 199 aaPredicted RBP13.14□□□□□ -0.31
HDAC7-227ENST00000548080 SMAD5-AS1Q9Y6J3 95 aa13.14□□□□□ -0.31
HDAC7-227ENST00000548080 NDUFB4O95168 129 aa13.13□□□□□ -0.31
HDAC7-227ENST00000548080 APOC3P02656 99 aa13.13□□□□□ -0.31
HDAC7-227ENST00000548080 CSN3P07498 182 aa13.13□□□□□ -0.31
HDAC7-227ENST00000548080 FAM90A2PQ658T7 463 aa13.13□□□□□ -0.31
HDAC7-227ENST00000548080 C17orf77Q96MU5 243 aa13.13□□□□□ -0.31
HDAC7-227ENST00000548080 SMPXQ9UHP9 88 aa13.13□□□□□ -0.31
HDAC7-227ENST00000548080 PGPA6NDG6 321 aa13.12□□□□□ -0.31
HDAC7-227ENST00000548080 ZNF785A8K8V0 405 aa13.12□□□□□ -0.31
HDAC7-227ENST00000548080 EGFEM1PQ0D2K5 195 aa13.12□□□□□ -0.31
HDAC7-227ENST00000548080 PDE6HQ13956 83 aa13.12□□□□□ -0.31
HDAC7-227ENST00000548080 ADAMTSL5Q6ZMM2 481 aa13.12□□□□□ -0.31
HDAC7-227ENST00000548080 LYPD1Q8N2G4 141 aa13.12□□□□□ -0.31
HDAC7-227ENST00000548080 GLMPQ8WWB7 406 aa13.12□□□□□ -0.31
HDAC7-227ENST00000548080 C11orf52Q96A22 123 aa13.12□□□□□ -0.31
HDAC7-227ENST00000548080 PRR25Q96S07 402 aa13.12□□□□□ -0.31
HDAC7-227ENST00000548080 Q9H3A6 140 aa13.12□□□□□ -0.31
HDAC7-227ENST00000548080 OTORQ9NRC9 128 aa13.12□□□□□ -0.31
HDAC7-227ENST00000548080 A0A087X0K7 114 aa13.11□□□□□ -0.31
HDAC7-227ENST00000548080 SCO2A0A1W2PP80 73 aa13.11□□□□□ -0.31
HDAC7-227ENST00000548080 A8MWP6 167 aa13.11□□□□□ -0.31
HDAC7-227ENST00000548080 WIPF1O43516 503 aa13.11□□□□□ -0.31
HDAC7-227ENST00000548080 RPUSD4Q96CM3 377 aaKnown RBP13.11□□□□□ -0.31
HDAC7-227ENST00000548080 RHPN1-AS1Q9BWJ2 59 aa13.11□□□□□ -0.31
HDAC7-227ENST00000548080 TMEM213A2RRL7 107 aa13.1□□□□□ -0.31
HDAC7-227ENST00000548080 BMI1P35226 326 aa13.1□□□□□ -0.31
HDAC7-227ENST00000548080 FAM74A3Q4VXF1 159 aa13.1□□□□□ -0.31
HDAC7-227ENST00000548080 SIGLEC15Q6ZMC9 328 aa13.1□□□□□ -0.31
HDAC7-227ENST00000548080 TCEAL7Q9BRU2 100 aa13.1□□□□□ -0.31
HDAC7-227ENST00000548080 PARLQ9H300 379 aa13.1□□□□□ -0.31
HDAC7-227ENST00000548080 PEMTQ9UBM1 199 aa13.1□□□□□ -0.31
HDAC7-227ENST00000548080 C2orf70A6NJV1 201 aa13.1□□□□□ -0.31
HDAC7-227ENST00000548080 ZNF727A8MUV8 499 aa13.1□□□□□ -0.31
HDAC7-227ENST00000548080 SLC17A3O00476 420 aa13.1□□□□□ -0.31
HDAC7-227ENST00000548080 CHEK1O14757 476 aa13.1□□□□□ -0.31
HDAC7-227ENST00000548080 ZNF253O75346 499 aa13.1□□□□□ -0.31
HDAC7-227ENST00000548080 SLC25A5P05141 298 aaKnown RBP13.1□□□□□ -0.31
HDAC7-227ENST00000548080 MEOX2P50222 304 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms