RNA–Protein interactions for RNA: ENST00000547988.5

CALCOCO1-208, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,277 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-208ENST00000547988 LINC00052Q96N35 136 aa8.41□□□□□ -1.06
CALCOCO1-208ENST00000547988 SH3BGRL3Q9H299 93 aa8.41□□□□□ -1.06
CALCOCO1-208ENST00000547988 RPRMQ9NS64 109 aa8.41□□□□□ -1.06
CALCOCO1-208ENST00000547988 TRAV8-2A0A0B4J237 113 aa8.4□□□□□ -1.06
CALCOCO1-208ENST00000547988 KIR2DL5BA0A0G2JN68 375 aa8.4□□□□□ -1.06
CALCOCO1-208ENST00000547988 KIR2DL5BA0A0G2JPC4 375 aa8.4□□□□□ -1.06
CALCOCO1-208ENST00000547988 H3BQ15 152 aa8.4□□□□□ -1.06
CALCOCO1-208ENST00000547988 HIST1H1EP10412 219 aaKnown RBP8.4□□□□□ -1.06
CALCOCO1-208ENST00000547988 RAB2AP61019 212 aa8.4□□□□□ -1.06
CALCOCO1-208ENST00000547988 EIF5AP63241 154 aaKnown RBP8.4□□□□□ -1.06
CALCOCO1-208ENST00000547988 PDE6HQ13956 83 aa8.4□□□□□ -1.06
CALCOCO1-208ENST00000547988 HAGHQ16775 308 aa8.4□□□□□ -1.06
CALCOCO1-208ENST00000547988 FOXI2Q6ZQN5 318 aa8.4□□□□□ -1.06
CALCOCO1-208ENST00000547988 TMUB2Q71RG4 321 aa8.4□□□□□ -1.06
CALCOCO1-208ENST00000547988 KIR2DL5AQ8N109 375 aa8.4□□□□□ -1.06
CALCOCO1-208ENST00000547988 OR10G4Q8NGN3 311 aa8.4□□□□□ -1.06
CALCOCO1-208ENST00000547988 OR10G9Q8NGN4 311 aa8.4□□□□□ -1.06
CALCOCO1-208ENST00000547988 OR10G7Q8NGN6 311 aa8.4□□□□□ -1.06
CALCOCO1-208ENST00000547988 KIR2DL5BQ8NHK3 375 aa8.4□□□□□ -1.06
CALCOCO1-208ENST00000547988 SAT2Q96F10 170 aaPredicted RBP8.4□□□□□ -1.06
CALCOCO1-208ENST00000547988 TM2D3Q9BRN9 247 aa8.4□□□□□ -1.06
CALCOCO1-208ENST00000547988 OR51M1Q9H341 326 aa8.4□□□□□ -1.06
CALCOCO1-208ENST00000547988 ZNF331Q9NQX6 463 aaPredicted RBP8.4□□□□□ -1.06
CALCOCO1-208ENST00000547988 ZNF586Q9NXT0 402 aa8.4□□□□□ -1.06
CALCOCO1-208ENST00000547988 CLEC5AQ9NY25 188 aa8.4□□□□□ -1.06
CALCOCO1-208ENST00000547988 TRBV19A0A075B6N1 114 aa8.39□□□□□ -1.07
CALCOCO1-208ENST00000547988 UBE2CO00762 179 aa8.39□□□□□ -1.07
CALCOCO1-208ENST00000547988 OR7C2O60412 319 aa8.39□□□□□ -1.07
CALCOCO1-208ENST00000547988 PYYP10082 97 aa8.39□□□□□ -1.07
CALCOCO1-208ENST00000547988 SPP1P10451 314 aa8.39□□□□□ -1.07
CALCOCO1-208ENST00000547988 HLA-DRB4P13762 266 aa8.39□□□□□ -1.07
CALCOCO1-208ENST00000547988 CDC34P49427 236 aaPredicted RBP8.39□□□□□ -1.07
CALCOCO1-208ENST00000547988 LGALSLQ3ZCW2 172 aaPredicted RBP8.39□□□□□ -1.07
CALCOCO1-208ENST00000547988 ZFP69Q49AA0 526 aa8.39□□□□□ -1.07
CALCOCO1-208ENST00000547988 TMEM41BQ5BJD5 291 aa8.39□□□□□ -1.07
CALCOCO1-208ENST00000547988 ACTL10Q5JWF8 245 aa8.39□□□□□ -1.07
CALCOCO1-208ENST00000547988 FAM122CQ6P4D5 195 aa8.39□□□□□ -1.07
CALCOCO1-208ENST00000547988 TRPT1Q86TN4 253 aaKnown RBP8.39□□□□□ -1.07
CALCOCO1-208ENST00000547988 C20orf173Q96LM9 149 aa8.39□□□□□ -1.07
CALCOCO1-208ENST00000547988 ASCL2Q99929 193 aa8.39□□□□□ -1.07
CALCOCO1-208ENST00000547988 PAXXQ9BUH6 204 aa8.39□□□□□ -1.07
CALCOCO1-208ENST00000547988 ZNF471Q9BX82 626 aaPredicted RBP8.39□□□□□ -1.07
CALCOCO1-208ENST00000547988 SAV1Q9H4B6 383 aaPredicted RBP8.39□□□□□ -1.07
CALCOCO1-208ENST00000547988 HLA-DRB4X5D2U9 266 aa8.39□□□□□ -1.07
CALCOCO1-208ENST00000547988 KNCNA6PVL3 124 aa8.38□□□□□ -1.07
CALCOCO1-208ENST00000547988 SLC17A3O00476 420 aa8.38□□□□□ -1.07
CALCOCO1-208ENST00000547988 RPL35AP18077 110 aaKnown RBP8.38□□□□□ -1.07
CALCOCO1-208ENST00000547988 PSG9Q00887 426 aa8.38□□□□□ -1.07
CALCOCO1-208ENST00000547988 CD300CQ08708 224 aa8.38□□□□□ -1.07
CALCOCO1-208ENST00000547988 PSG3Q16557 428 aa8.38□□□□□ -1.07
CALCOCO1-208ENST00000547988 AKR1C8PQ5T2L2 129 aa8.38□□□□□ -1.07
CALCOCO1-208ENST00000547988 EBLN2Q6P2I7 272 aa8.38□□□□□ -1.07
CALCOCO1-208ENST00000547988 MORN3Q6PF18 240 aaPredicted RBP8.38□□□□□ -1.07
CALCOCO1-208ENST00000547988 PQLC2Q6ZP29 291 aa8.38□□□□□ -1.07
CALCOCO1-208ENST00000547988 RPP25LQ8N5L8 163 aaKnown RBP8.38□□□□□ -1.07
CALCOCO1-208ENST00000547988 RNF182Q8N6D2 247 aa8.38□□□□□ -1.07
CALCOCO1-208ENST00000547988 ZNF738Q8NE65 137 aa8.38□□□□□ -1.07
CALCOCO1-208ENST00000547988 RNF141Q8WVD5 230 aa8.38□□□□□ -1.07
CALCOCO1-208ENST00000547988 FXYD5Q96DB9 178 aa8.38□□□□□ -1.07
CALCOCO1-208ENST00000547988 CLUHP3Q96NS8 147 aa8.38□□□□□ -1.07
CALCOCO1-208ENST00000547988 SPATA25Q9BR10 227 aa8.38□□□□□ -1.07
CALCOCO1-208ENST00000547988 ZMAT4Q9H898 229 aa8.38□□□□□ -1.07
CALCOCO1-208ENST00000547988 TGP01266 2768 aa8.38□□□□□ -1.07
CALCOCO1-208ENST00000547988 A0A0J9YX75 114 aa8.37□□□□□ -1.07
CALCOCO1-208ENST00000547988 H3BMM0 161 aa8.37□□□□□ -1.07
CALCOCO1-208ENST00000547988 H3BTX0 84 aa8.37□□□□□ -1.07
CALCOCO1-208ENST00000547988 SNRPCP09234 159 aaKnown RBP8.37□□□□□ -1.07
CALCOCO1-208ENST00000547988 OR10J4P0C629 311 aa8.37□□□□□ -1.07
CALCOCO1-208ENST00000547988 NBEAP1P0C6P0 100 aa8.37□□□□□ -1.07
CALCOCO1-208ENST00000547988 SEC11BP0C7V7 166 aa8.37□□□□□ -1.07
CALCOCO1-208ENST00000547988 TPT1P13693 172 aaKnown RBP8.37□□□□□ -1.07
CALCOCO1-208ENST00000547988 C4BPBP20851 252 aa8.37□□□□□ -1.07
CALCOCO1-208ENST00000547988 UBE2L3P68036 154 aaKnown RBP8.37□□□□□ -1.07
CALCOCO1-208ENST00000547988 GDF5OSQ5U4N7 250 aa8.37□□□□□ -1.07
CALCOCO1-208ENST00000547988 IGFL4Q6B9Z1 124 aa8.37□□□□□ -1.07
CALCOCO1-208ENST00000547988 Q6ZWC4 215 aa8.37□□□□□ -1.07
CALCOCO1-208ENST00000547988 BAP18Q8IXM2 172 aa8.37□□□□□ -1.07
CALCOCO1-208ENST00000547988 STOML3Q8TAV4 291 aa8.37□□□□□ -1.07
CALCOCO1-208ENST00000547988 BLNKQ8WV28 456 aa8.37□□□□□ -1.07
CALCOCO1-208ENST00000547988 RAB24Q969Q5 203 aa8.37□□□□□ -1.07
CALCOCO1-208ENST00000547988 ZNF503Q96F45 646 aa8.37□□□□□ -1.07
CALCOCO1-208ENST00000547988 ACTR3CQ9C0K3 210 aaPredicted RBP8.37□□□□□ -1.07
CALCOCO1-208ENST00000547988 CSTL1Q9H114 145 aa8.37□□□□□ -1.07
CALCOCO1-208ENST00000547988 DNAH9Q9NYC9 4486 aa8.36□□□□□ -1.07
CALCOCO1-208ENST00000547988 UMAD1C9J7I0 102 aa8.36□□□□□ -1.07
CALCOCO1-208ENST00000547988 NDUFB4O95168 129 aa8.36□□□□□ -1.07
CALCOCO1-208ENST00000547988 STAG3L2P0CL84 134 aa8.36□□□□□ -1.07
CALCOCO1-208ENST00000547988 STAG3L3P0CL85 134 aa8.36□□□□□ -1.07
CALCOCO1-208ENST00000547988 HLA-DMBP28068 263 aa8.36□□□□□ -1.07
CALCOCO1-208ENST00000547988 NUTF2P61970 127 aaKnown RBP8.36□□□□□ -1.07
CALCOCO1-208ENST00000547988 MRPL53Q96EL3 112 aaKnown RBP8.36□□□□□ -1.07
CALCOCO1-208ENST00000547988 AAMDCQ9H7C9 122 aa8.36□□□□□ -1.07
CALCOCO1-208ENST00000547988 PRELID1Q9Y255 219 aa8.36□□□□□ -1.07
CALCOCO1-208ENST00000547988 CTXND1A0A1B0GTU2 59 aa8.35□□□□□ -1.07
CALCOCO1-208ENST00000547988 A8MTW9 85 aa8.35□□□□□ -1.07
CALCOCO1-208ENST00000547988 F6UB75 175 aa8.35□□□□□ -1.07
CALCOCO1-208ENST00000547988 DUSP14O95147 198 aaKnown RBP8.35□□□□□ -1.07
CALCOCO1-208ENST00000547988 CA1P00915 261 aaPredicted RBP8.35□□□□□ -1.07
CALCOCO1-208ENST00000547988 ARL14EPLP0DKL9 152 aa8.35□□□□□ -1.07
CALCOCO1-208ENST00000547988 DEFB1P60022 68 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms