RNA–Protein interactions for RNA: ENST00000547417.1

CPNE8-205, Transcript of copine 8, humanhuman

TSL 2

Gene CPNE8, Length 376 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-205ENST00000547417 RNF11Q9Y3C5 154 aa0.96□□□□□ -2.26
CPNE8-205ENST00000547417 TCOF1Q13428 1488 aaKnown RBP0.96□□□□□ -2.26
CPNE8-205ENST00000547417 GBF1Q92538 1859 aa0.96□□□□□ -2.26
CPNE8-205ENST00000547417 RGS12O14924 1447 aa0.96□□□□□ -2.26
CPNE8-205ENST00000547417 MYH10P35580 1976 aa0.96□□□□□ -2.26
CPNE8-205ENST00000547417 SCN8AQ9UQD0 1980 aa0.96□□□□□ -2.26
CPNE8-205ENST00000547417 FRMPD1Q5SYB0 1578 aa0.96□□□□□ -2.26
CPNE8-205ENST00000547417 NUP210Q8TEM1 1887 aaPredicted RBP0.95□□□□□ -2.26
CPNE8-205ENST00000547417 HELZ2Q9BYK8 2649 aaKnown RBP0.95□□□□□ -2.26
CPNE8-205ENST00000547417 A2MP01023 1474 aa0.95□□□□□ -2.26
CPNE8-205ENST00000547417 TRAV36DV7A0A075B6V5 113 aa0.95□□□□□ -2.26
CPNE8-205ENST00000547417 LOC105371267A0A1B0GV96 52 aa0.95□□□□□ -2.26
CPNE8-205ENST00000547417 TCRBV4S1A1TA0A5B7 111 aa0.95□□□□□ -2.26
CPNE8-205ENST00000547417 K7ERJ3 54 aa0.95□□□□□ -2.26
CPNE8-205ENST00000547417 DEGS1O15121 323 aa0.95□□□□□ -2.26
CPNE8-205ENST00000547417 RNASE3P12724 160 aaKnown RBP0.95□□□□□ -2.26
CPNE8-205ENST00000547417 RPL7P18124 248 aaKnown RBP0.95□□□□□ -2.26
CPNE8-205ENST00000547417 RPS3P23396 243 aaKnown RBP eCLIP0.95□□□□□ -2.26
CPNE8-205ENST00000547417 MRPS36P82909 103 aaKnown RBP0.95□□□□□ -2.26
CPNE8-205ENST00000547417 CDK6Q00534 326 aa0.95□□□□□ -2.26
CPNE8-205ENST00000547417 CCDC153Q494R4 210 aa0.95□□□□□ -2.26
CPNE8-205ENST00000547417 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.95□□□□□ -2.26
CPNE8-205ENST00000547417 FAM216BQ8N7L0 139 aa0.95□□□□□ -2.26
CPNE8-205ENST00000547417 TMEM229BQ8NBD8 167 aa0.95□□□□□ -2.26
CPNE8-205ENST00000547417 POP5Q969H6 163 aaKnown RBP0.95□□□□□ -2.26
CPNE8-205ENST00000547417 DIRC1Q969H9 104 aa0.95□□□□□ -2.26
CPNE8-205ENST00000547417 CHCHD1Q96BP2 118 aaKnown RBP0.95□□□□□ -2.26
CPNE8-205ENST00000547417 MUCL1Q96DR8 90 aa0.95□□□□□ -2.26
CPNE8-205ENST00000547417 HYLS1Q96M11 299 aa0.95□□□□□ -2.26
CPNE8-205ENST00000547417 TP53RKQ96S44 253 aa0.95□□□□□ -2.26
CPNE8-205ENST00000547417 MYLKQ15746 1914 aa0.95□□□□□ -2.26
CPNE8-205ENST00000547417 ANKRD31Q8N7Z5 1873 aa0.95□□□□□ -2.26
CPNE8-205ENST00000547417 N4BP2Q86UW6 1770 aaPredicted RBP0.94□□□□□ -2.26
CPNE8-205ENST00000547417 TRAV27A0A087WT01 109 aa0.94□□□□□ -2.26
CPNE8-205ENST00000547417 A0A087WX48 190 aa0.94□□□□□ -2.26
CPNE8-205ENST00000547417 TRBV27A0A0K0K1C4 114 aa0.94□□□□□ -2.26
CPNE8-205ENST00000547417 hDV103S1A0JD37 113 aa0.94□□□□□ -2.26
CPNE8-205ENST00000547417 OR2T8A6NH00 312 aa0.94□□□□□ -2.26
CPNE8-205ENST00000547417 M0R233 179 aa0.94□□□□□ -2.26
CPNE8-205ENST00000547417 MT-ND6P03923 174 aa0.94□□□□□ -2.26
CPNE8-205ENST00000547417 DBIP07108 87 aaKnown RBP0.94□□□□□ -2.26
CPNE8-205ENST00000547417 SCTP09683 121 aa0.94□□□□□ -2.26
CPNE8-205ENST00000547417 FABP2P12104 132 aa0.94□□□□□ -2.26
CPNE8-205ENST00000547417 ZNF93P35789 620 aaPredicted RBP0.94□□□□□ -2.26
CPNE8-205ENST00000547417 S100A12P80511 92 aa0.94□□□□□ -2.26
CPNE8-205ENST00000547417 DEFB113Q30KQ7 82 aa0.94□□□□□ -2.26
CPNE8-205ENST00000547417 VMA21Q3ZAQ7 101 aa0.94□□□□□ -2.26
CPNE8-205ENST00000547417 HRCT1Q6UXD1 115 aa0.94□□□□□ -2.26
CPNE8-205ENST00000547417 LINC00305Q7Z4B0 112 aa0.94□□□□□ -2.26
CPNE8-205ENST00000547417 KRTAP13-1Q8IUC0 172 aa0.94□□□□□ -2.26
CPNE8-205ENST00000547417 Q8N2B8 174 aa0.94□□□□□ -2.26
CPNE8-205ENST00000547417 Q8N814 137 aa0.94□□□□□ -2.26
CPNE8-205ENST00000547417 OR5H6Q8NGV6 325 aa0.94□□□□□ -2.26
CPNE8-205ENST00000547417 ZNF431Q8TF32 576 aaPredicted RBP0.94□□□□□ -2.26
CPNE8-205ENST00000547417 PRELID3AQ96N28 172 aa0.94□□□□□ -2.26
CPNE8-205ENST00000547417 TAS2R7Q9NYW3 318 aa0.94□□□□□ -2.26
CPNE8-205ENST00000547417 JPT1Q9UK76 154 aa0.94□□□□□ -2.26
CPNE8-205ENST00000547417 TRAPPC2LQ9UL33 140 aa0.94□□□□□ -2.26
CPNE8-205ENST00000547417 OVOS2A0A0G2JMS6 1433 aa0.94□□□□□ -2.26
CPNE8-205ENST00000547417 INTS1Q8N201 2190 aaKnown RBP0.94□□□□□ -2.26
CPNE8-205ENST00000547417 CR1P17927 2039 aa0.93□□□□□ -2.26
CPNE8-205ENST00000547417 MICAL3Q7RTP6 2002 aa0.93□□□□□ -2.26
CPNE8-205ENST00000547417 POLEQ07864 2286 aa0.93□□□□□ -2.26
CPNE8-205ENST00000547417 IGKV2D-26A0A0A0MRZ7 120 aa0.93□□□□□ -2.26
CPNE8-205ENST00000547417 TRAV13-1A0A0B4J241 112 aa0.93□□□□□ -2.26
CPNE8-205ENST00000547417 LOC107984640A0A0U1RRK4 108 aa0.93□□□□□ -2.26
CPNE8-205ENST00000547417 ERC2-IT1O76042 136 aa0.93□□□□□ -2.26
CPNE8-205ENST00000547417 DPM2O94777 84 aa0.93□□□□□ -2.26
CPNE8-205ENST00000547417 IGLV1-51P01701 117 aa0.93□□□□□ -2.26
CPNE8-205ENST00000547417 SAA1P0DJI8 122 aaPredicted RBP0.93□□□□□ -2.26
CPNE8-205ENST00000547417 FABP4P15090 132 aa0.93□□□□□ -2.26
CPNE8-205ENST00000547417 IL9P15248 144 aa0.93□□□□□ -2.26
CPNE8-205ENST00000547417 ARPC4P59998 168 aa0.93□□□□□ -2.26
CPNE8-205ENST00000547417 LSM3P62310 102 aaKnown RBP0.93□□□□□ -2.26
CPNE8-205ENST00000547417 OR8B8Q15620 311 aa0.93□□□□□ -2.26
CPNE8-205ENST00000547417 UNQ6190/PRO20217Q6UXQ8 127 aa0.93□□□□□ -2.26
CPNE8-205ENST00000547417 ZNF833PQ6ZTB9 187 aa0.93□□□□□ -2.26
CPNE8-205ENST00000547417 ARPINQ7Z6K5 226 aa0.93□□□□□ -2.26
CPNE8-205ENST00000547417 OR8I2Q8N0Y5 310 aa0.93□□□□□ -2.26
CPNE8-205ENST00000547417 OR5AS1Q8N127 324 aa0.93□□□□□ -2.26
CPNE8-205ENST00000547417 LRRC18Q8N456 261 aa0.93□□□□□ -2.26
CPNE8-205ENST00000547417 DEFB119Q8N690 84 aa0.93□□□□□ -2.26
CPNE8-205ENST00000547417 OR5A2Q8NGI9 324 aa0.93□□□□□ -2.26
CPNE8-205ENST00000547417 CCL4L1Q8NHW4 92 aa0.93□□□□□ -2.26
CPNE8-205ENST00000547417 ZNF625Q96I27 306 aaPredicted RBP0.93□□□□□ -2.26
CPNE8-205ENST00000547417 REG4Q9BYZ8 158 aa0.93□□□□□ -2.26
CPNE8-205ENST00000547417 KLK9Q9UKQ9 250 aa0.93□□□□□ -2.26
CPNE8-205ENST00000547417 CHCHD2Q9Y6H1 151 aaPredicted RBP0.93□□□□□ -2.26
CPNE8-205ENST00000547417 ARHGEF10O15013 1369 aa0.93□□□□□ -2.26
CPNE8-205ENST00000547417 MED23Q9ULK4 1368 aa0.93□□□□□ -2.26
CPNE8-205ENST00000547417 CEP152O94986 1710 aa0.92□□□□□ -2.26
CPNE8-205ENST00000547417 PCDH15Q96QU1 1955 aa0.92□□□□□ -2.26
CPNE8-205ENST00000547417 ADGRB2O60241 1585 aa0.92□□□□□ -2.26
CPNE8-205ENST00000547417 COL11A1P12107 1806 aaPredicted RBP0.92□□□□□ -2.26
CPNE8-205ENST00000547417 COL4A1P02462 1669 aa0.92□□□□□ -2.26
CPNE8-205ENST00000547417 ARFGEF3Q5TH69 2177 aa0.92□□□□□ -2.26
CPNE8-205ENST00000547417 TRAV10A0A0B4J240 114 aa0.92□□□□□ -2.26
CPNE8-205ENST00000547417 IGKV3D-7A0A0C4DH55 119 aa0.92□□□□□ -2.26
CPNE8-205ENST00000547417 IGKV3OR2-268A0A0C4DH90 116 aa0.92□□□□□ -2.26
CPNE8-205ENST00000547417 TMEM189A5PLL7 270 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms