RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 GUK1Q16774 197 aa12.37□□□□□ -0.43
LTBR-215ENST00000546296 DEFB135Q30KP9 77 aa12.37□□□□□ -0.43
LTBR-215ENST00000546296 RPL7L1Q6DKI1 246 aaKnown RBP12.37□□□□□ -0.43
LTBR-215ENST00000546296 MORN3Q6PF18 240 aaPredicted RBP12.37□□□□□ -0.43
LTBR-215ENST00000546296 Q6ZWC4 215 aa12.37□□□□□ -0.43
LTBR-215ENST00000546296 ZNF738Q8NE65 137 aa12.37□□□□□ -0.43
LTBR-215ENST00000546296 SAV1Q9H4B6 383 aaPredicted RBP12.37□□□□□ -0.43
LTBR-215ENST00000546296 TMEM14CQ9P0S9 112 aa12.37□□□□□ -0.43
LTBR-215ENST00000546296 SPRY2O43597 315 aa12.36□□□□□ -0.43
LTBR-215ENST00000546296 IGKV3-20P01619 116 aa12.36□□□□□ -0.43
LTBR-215ENST00000546296 SPP1P10451 314 aa12.36□□□□□ -0.43
LTBR-215ENST00000546296 HLA-DRB4P13762 266 aa12.36□□□□□ -0.43
LTBR-215ENST00000546296 ATP6V0CP27449 155 aa12.36□□□□□ -0.43
LTBR-215ENST00000546296 OR4B1Q8NGF8 309 aa12.36□□□□□ -0.43
LTBR-215ENST00000546296 SLC50A1Q9BRV3 221 aa12.36□□□□□ -0.43
LTBR-215ENST00000546296 SLC25A2Q9BXI2 301 aa12.36□□□□□ -0.43
LTBR-215ENST00000546296 HLA-DRB4X5D2U9 266 aa12.36□□□□□ -0.43
LTBR-215ENST00000546296 A0A1W2PPV4 95 aa12.35□□□□□ -0.43
LTBR-215ENST00000546296 HMSDA8MTL9 139 aa12.35□□□□□ -0.43
LTBR-215ENST00000546296 F6UB75 175 aa12.35□□□□□ -0.43
LTBR-215ENST00000546296 PYYP10082 97 aa12.35□□□□□ -0.43
LTBR-215ENST00000546296 HIST1H1EP10412 219 aaKnown RBP12.35□□□□□ -0.43
LTBR-215ENST00000546296 M6PRP20645 277 aa12.35□□□□□ -0.43
LTBR-215ENST00000546296 HLA-DMBP28068 263 aa12.35□□□□□ -0.43
LTBR-215ENST00000546296 NUTF2P61970 127 aaKnown RBP12.35□□□□□ -0.43
LTBR-215ENST00000546296 PSG3Q16557 428 aa12.35□□□□□ -0.43
LTBR-215ENST00000546296 GDF5OSQ5U4N7 250 aa12.35□□□□□ -0.43
LTBR-215ENST00000546296 OR11H4Q8NGC9 324 aa12.35□□□□□ -0.43
LTBR-215ENST00000546296 OR10G4Q8NGN3 311 aa12.35□□□□□ -0.43
LTBR-215ENST00000546296 OR10G9Q8NGN4 311 aa12.35□□□□□ -0.43
LTBR-215ENST00000546296 OR10G7Q8NGN6 311 aa12.35□□□□□ -0.43
LTBR-215ENST00000546296 GNPNAT1Q96EK6 184 aaPredicted RBP12.35□□□□□ -0.43
LTBR-215ENST00000546296 ST6GAL2Q96JF0 529 aa12.35□□□□□ -0.43
LTBR-215ENST00000546296 OVOL2Q9BRP0 275 aa12.35□□□□□ -0.43
LTBR-215ENST00000546296 PSMG3Q9BT73 122 aaPredicted RBP12.35□□□□□ -0.43
LTBR-215ENST00000546296 OR51M1Q9H341 326 aa12.35□□□□□ -0.43
LTBR-215ENST00000546296 ZNF331Q9NQX6 463 aaPredicted RBP12.35□□□□□ -0.43
LTBR-215ENST00000546296 ZNF586Q9NXT0 402 aa12.35□□□□□ -0.43
LTBR-215ENST00000546296 A0A0J9YX75 114 aa12.34□□□□□ -0.43
LTBR-215ENST00000546296 OR7C2O60412 319 aa12.34□□□□□ -0.43
LTBR-215ENST00000546296 JTBO76095 146 aa12.34□□□□□ -0.43
LTBR-215ENST00000546296 TAS2R45P59539 299 aa12.34□□□□□ -0.43
LTBR-215ENST00000546296 FAM122CQ6P4D5 195 aa12.34□□□□□ -0.43
LTBR-215ENST00000546296 KCNRGQ8N5I3 272 aa12.34□□□□□ -0.43
LTBR-215ENST00000546296 BLNKQ8WV28 456 aa12.34□□□□□ -0.43
LTBR-215ENST00000546296 RNF183Q96D59 192 aa12.34□□□□□ -0.43
LTBR-215ENST00000546296 FAM167A-AS1Q96KT0 104 aa12.34□□□□□ -0.43
LTBR-215ENST00000546296 PAXXQ9BUH6 204 aa12.34□□□□□ -0.43
LTBR-215ENST00000546296 TP53TG1Q9Y2A0 90 aa12.34□□□□□ -0.43
LTBR-215ENST00000546296 TRBV19A0A075B6N1 114 aa12.33□□□□□ -0.44
LTBR-215ENST00000546296 A0A0D9SG52 128 aa12.33□□□□□ -0.44
LTBR-215ENST00000546296 SLC17A3O00476 420 aa12.33□□□□□ -0.44
LTBR-215ENST00000546296 DUSP14O95147 198 aaKnown RBP12.33□□□□□ -0.44
LTBR-215ENST00000546296 MBP02144 154 aa12.33□□□□□ -0.44
LTBR-215ENST00000546296 RAB2AP61019 212 aa12.33□□□□□ -0.44
LTBR-215ENST00000546296 SERF2P84101 59 aa12.33□□□□□ -0.44
LTBR-215ENST00000546296 TMEM41BQ5BJD5 291 aa12.33□□□□□ -0.44
LTBR-215ENST00000546296 OR2G3Q8NGZ4 309 aa12.33□□□□□ -0.44
LTBR-215ENST00000546296 RNF141Q8WVD5 230 aa12.33□□□□□ -0.44
LTBR-215ENST00000546296 RPUSD4Q96CM3 377 aaKnown RBP12.33□□□□□ -0.44
LTBR-215ENST00000546296 SAT2Q96F10 170 aaPredicted RBP12.33□□□□□ -0.44
LTBR-215ENST00000546296 ARPC5LQ9BPX5 153 aa12.33□□□□□ -0.44
LTBR-215ENST00000546296 SH3BGRL3Q9H299 93 aa12.33□□□□□ -0.44
LTBR-215ENST00000546296 CLEC5AQ9NY25 188 aa12.33□□□□□ -0.44
LTBR-215ENST00000546296 OR10J4P0C629 311 aa12.32□□□□□ -0.44
LTBR-215ENST00000546296 NBEAP1P0C6P0 100 aa12.32□□□□□ -0.44
LTBR-215ENST00000546296 PSG9Q00887 426 aa12.32□□□□□ -0.44
LTBR-215ENST00000546296 ZNF345Q14585 488 aa12.32□□□□□ -0.44
LTBR-215ENST00000546296 KHDC3LQ587J8 217 aa12.32□□□□□ -0.44
LTBR-215ENST00000546296 AKAP14Q86UN6 197 aa12.32□□□□□ -0.44
LTBR-215ENST00000546296 TCTE3Q8IZS6 198 aa12.32□□□□□ -0.44
LTBR-215ENST00000546296 KANTRA0A1W2PQU2 76 aa12.31□□□□□ -0.44
LTBR-215ENST00000546296 ZNF705FA8MVS1 300 aaPredicted RBP12.31□□□□□ -0.44
LTBR-215ENST00000546296 ZNF253O75346 499 aa12.31□□□□□ -0.44
LTBR-215ENST00000546296 EIF3GO75821 320 aaKnown RBP eCLIP12.31□□□□□ -0.44
LTBR-215ENST00000546296 ZNF705DP0CH99 300 aaPredicted RBP12.31□□□□□ -0.44
LTBR-215ENST00000546296 ZNF705BP0CI00 300 aaPredicted RBP12.31□□□□□ -0.44
LTBR-215ENST00000546296 C4BPBP20851 252 aa12.31□□□□□ -0.44
LTBR-215ENST00000546296 FXYD7P58549 80 aa12.31□□□□□ -0.44
LTBR-215ENST00000546296 HIST1H1AQ02539 215 aaPredicted RBP12.31□□□□□ -0.44
LTBR-215ENST00000546296 PDE6HQ13956 83 aa12.31□□□□□ -0.44
LTBR-215ENST00000546296 WWC2-AS2Q96NR7 200 aa12.31□□□□□ -0.44
LTBR-215ENST00000546296 C1QTNF4Q9BXJ3 329 aa12.31□□□□□ -0.44
LTBR-215ENST00000546296 CYTL1Q9NRR1 136 aa12.31□□□□□ -0.44
LTBR-215ENST00000546296 PPP1R14DQ9NXH3 145 aa12.31□□□□□ -0.44
LTBR-215ENST00000546296 HUWE1Q7Z6Z7 4374 aaKnown RBP12.3□□□□□ -0.44
LTBR-215ENST00000546296 TENM3Q9P273 2699 aa12.3□□□□□ -0.44
LTBR-215ENST00000546296 PFDN1O60925 122 aa12.3□□□□□ -0.44
LTBR-215ENST00000546296 GIG44P09565 113 aaPredicted RBP12.3□□□□□ -0.44
LTBR-215ENST00000546296 PRB4P10163 310 aaPredicted RBP12.3□□□□□ -0.44
LTBR-215ENST00000546296 CNN1P51911 297 aaKnown RBP12.3□□□□□ -0.44
LTBR-215ENST00000546296 UBE2L3P68036 154 aaKnown RBP12.3□□□□□ -0.44
LTBR-215ENST00000546296 OR8A1Q8NGG7 326 aa12.3□□□□□ -0.44
LTBR-215ENST00000546296 FXYD5Q96DB9 178 aa12.3□□□□□ -0.44
LTBR-215ENST00000546296 CLUHP3Q96NS8 147 aa12.3□□□□□ -0.44
LTBR-215ENST00000546296 RARRES2Q99969 163 aa12.3□□□□□ -0.44
LTBR-215ENST00000546296 AAMDCQ9H7C9 122 aa12.3□□□□□ -0.44
LTBR-215ENST00000546296 XCL2Q9UBD3 114 aa12.3□□□□□ -0.44
LTBR-215ENST00000546296 HMGB3O15347 200 aaKnown RBP12.29□□□□□ -0.44
LTBR-215ENST00000546296 NDUFB4O95168 129 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms