RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 HIGD1AQ9Y241 93 aa8.7□□□□□ -1.02
COPS7A-221ENST00000546229 POLR2GP62487 172 aaKnown RBP eCLIP8.69□□□□□ -1.02
COPS7A-221ENST00000546229 SSX7Q7RTT5 188 aa8.69□□□□□ -1.02
COPS7A-221ENST00000546229 DEDD2Q8WXF8 326 aa8.69□□□□□ -1.02
COPS7A-221ENST00000546229 SLC25A21Q9BQT8 299 aaPredicted RBP8.69□□□□□ -1.02
COPS7A-221ENST00000546229 ZNF331Q9NQX6 463 aaPredicted RBP8.69□□□□□ -1.02
COPS7A-221ENST00000546229 STRAPQ9Y3F4 350 aaKnown RBP8.69□□□□□ -1.02
COPS7A-221ENST00000546229 PRAC2D3DTV9 90 aa8.68□□□□□ -1.02
COPS7A-221ENST00000546229 FNDC10F2Z333 226 aa8.68□□□□□ -1.02
COPS7A-221ENST00000546229 SLC17A3O00476 420 aa8.68□□□□□ -1.02
COPS7A-221ENST00000546229 HYPMO75409 117 aa8.68□□□□□ -1.02
COPS7A-221ENST00000546229 CXCL2P19875 107 aa8.68□□□□□ -1.02
COPS7A-221ENST00000546229 BTF3P20290 206 aaKnown RBP8.68□□□□□ -1.02
COPS7A-221ENST00000546229 FAUP35544 74 aaKnown RBP8.68□□□□□ -1.02
COPS7A-221ENST00000546229 CDKN1BP46527 198 aa8.68□□□□□ -1.02
COPS7A-221ENST00000546229 RPP30P78346 268 aaKnown RBP8.68□□□□□ -1.02
COPS7A-221ENST00000546229 DLK1P80370 383 aa8.68□□□□□ -1.02
COPS7A-221ENST00000546229 GFI1BQ5VTD9 330 aa8.68□□□□□ -1.02
COPS7A-221ENST00000546229 MORN5Q5VZ52 161 aa8.68□□□□□ -1.02
COPS7A-221ENST00000546229 ZNF493Q6ZR52 646 aa8.68□□□□□ -1.02
COPS7A-221ENST00000546229 Q6ZRN7 208 aaPredicted RBP8.68□□□□□ -1.02
COPS7A-221ENST00000546229 SPATA12Q7Z6I5 190 aa8.68□□□□□ -1.02
COPS7A-221ENST00000546229 ZNF503Q96F45 646 aa8.68□□□□□ -1.02
COPS7A-221ENST00000546229 PARD6GQ9BYG4 376 aaPredicted RBP8.68□□□□□ -1.02
COPS7A-221ENST00000546229 NOP10Q9NPE3 64 aaKnown RBP8.68□□□□□ -1.02
COPS7A-221ENST00000546229 TIMM8BQ9Y5J9 83 aaPredicted RBP8.68□□□□□ -1.02
COPS7A-221ENST00000546229 C9orf170A2RU37 121 aa8.67□□□□□ -1.02
COPS7A-221ENST00000546229 ZNF701M0R085 212 aaPredicted RBP8.67□□□□□ -1.02
COPS7A-221ENST00000546229 IL5P05113 134 aa8.67□□□□□ -1.02
COPS7A-221ENST00000546229 CCL18P55774 89 aa8.67□□□□□ -1.02
COPS7A-221ENST00000546229 UBE2MP61081 183 aaKnown RBP8.67□□□□□ -1.02
COPS7A-221ENST00000546229 SELENOTP62341 195 aa8.67□□□□□ -1.02
COPS7A-221ENST00000546229 FGL1Q08830 312 aa8.67□□□□□ -1.02
COPS7A-221ENST00000546229 ARL16Q0P5N6 197 aa8.67□□□□□ -1.02
COPS7A-221ENST00000546229 CCDC190Q86UF4 302 aa8.67□□□□□ -1.02
COPS7A-221ENST00000546229 TOMM5Q8N4H5 51 aa8.67□□□□□ -1.02
COPS7A-221ENST00000546229 MCFD2Q8NI22 146 aa8.67□□□□□ -1.02
COPS7A-221ENST00000546229 RPUSD4Q96CM3 377 aaKnown RBP8.67□□□□□ -1.02
COPS7A-221ENST00000546229 SMIM8Q96KF7 97 aa8.67□□□□□ -1.02
COPS7A-221ENST00000546229 LINC01587Q99440 93 aa8.67□□□□□ -1.02
COPS7A-221ENST00000546229 C20orf144Q9BQM9 153 aa8.67□□□□□ -1.02
COPS7A-221ENST00000546229 RCL1Q9Y2P8 373 aaKnown RBP8.67□□□□□ -1.02
COPS7A-221ENST00000546229 TRAV26-1A0A087WT03 109 aa8.66□□□□□ -1.02
COPS7A-221ENST00000546229 LINC00854A0A1B0GVQ3 168 aa8.66□□□□□ -1.02
COPS7A-221ENST00000546229 H7BYZ3 331 aa8.66□□□□□ -1.02
COPS7A-221ENST00000546229 SSSCA1O60232 199 aa8.66□□□□□ -1.02
COPS7A-221ENST00000546229 IGLC2P0DOY2 106 aa8.66□□□□□ -1.02
COPS7A-221ENST00000546229 BTCP35070 178 aa8.66□□□□□ -1.02
COPS7A-221ENST00000546229 AP3S2P59780 193 aa8.66□□□□□ -1.02
COPS7A-221ENST00000546229 RAP2BP61225 183 aa8.66□□□□□ -1.02
COPS7A-221ENST00000546229 SLC38A11Q08AI6 406 aa8.66□□□□□ -1.02
COPS7A-221ENST00000546229 ESRGQ1W209 222 aa8.66□□□□□ -1.02
COPS7A-221ENST00000546229 C4orf46Q504U0 113 aa8.66□□□□□ -1.02
COPS7A-221ENST00000546229 RXFP4Q8TDU9 374 aa8.66□□□□□ -1.02
COPS7A-221ENST00000546229 ARV1Q9H2C2 271 aa8.66□□□□□ -1.02
COPS7A-221ENST00000546229 Q9H8V8 135 aa8.66□□□□□ -1.02
COPS7A-221ENST00000546229 MRPS16Q9Y3D3 137 aaKnown RBP8.66□□□□□ -1.02
COPS7A-221ENST00000546229 SMCO3A2RU48 225 aa8.65□□□□□ -1.02
COPS7A-221ENST00000546229 H3BNG1 76 aa8.65□□□□□ -1.02
COPS7A-221ENST00000546229 OR5G3P0C626 314 aa8.65□□□□□ -1.02
COPS7A-221ENST00000546229 METTL15P1P0C7V9 234 aa8.65□□□□□ -1.02
COPS7A-221ENST00000546229 M6PRP20645 277 aa8.65□□□□□ -1.02
COPS7A-221ENST00000546229 S100A7P31151 101 aa8.65□□□□□ -1.02
COPS7A-221ENST00000546229 RRAS2P62070 204 aaPredicted RBP8.65□□□□□ -1.02
COPS7A-221ENST00000546229 RHOBP62745 196 aa8.65□□□□□ -1.02
COPS7A-221ENST00000546229 PYDC2Q56P42 97 aa8.65□□□□□ -1.02
COPS7A-221ENST00000546229 LCN15Q6UWW0 184 aa8.65□□□□□ -1.02
COPS7A-221ENST00000546229 TMEM37Q8WXS4 190 aa8.65□□□□□ -1.02
COPS7A-221ENST00000546229 SAT2Q96F10 170 aaPredicted RBP8.65□□□□□ -1.02
COPS7A-221ENST00000546229 ARL6Q9H0F7 186 aa8.65□□□□□ -1.02
COPS7A-221ENST00000546229 PSENENQ9NZ42 101 aa8.65□□□□□ -1.02
COPS7A-221ENST00000546229 DNAH8Q96JB1 4490 aa8.64□□□□□ -1.03
COPS7A-221ENST00000546229 A0A1W2PPQ1 181 aa8.64□□□□□ -1.03
COPS7A-221ENST00000546229 H3BQ15 152 aa8.64□□□□□ -1.03
COPS7A-221ENST00000546229 NDUFB6O95139 128 aa8.64□□□□□ -1.03
COPS7A-221ENST00000546229 SNRPCP09234 159 aaKnown RBP8.64□□□□□ -1.03
COPS7A-221ENST00000546229 TTC32Q5I0X7 151 aa8.64□□□□□ -1.03
COPS7A-221ENST00000546229 C11orf72Q8NBR9 251 aa8.64□□□□□ -1.03
COPS7A-221ENST00000546229 VSIG2Q96IQ7 327 aa8.64□□□□□ -1.03
COPS7A-221ENST00000546229 ODF3Q96PU9 254 aa8.64□□□□□ -1.03
COPS7A-221ENST00000546229 MGST2Q99735 147 aa8.64□□□□□ -1.03
COPS7A-221ENST00000546229 SLC50A1Q9BRV3 221 aa8.64□□□□□ -1.03
COPS7A-221ENST00000546229 SRRQ9GZT4 340 aa8.64□□□□□ -1.03
COPS7A-221ENST00000546229 C11orf1Q9H5F2 150 aa8.64□□□□□ -1.03
COPS7A-221ENST00000546229 FLVCR2Q9UPI3 526 aa8.64□□□□□ -1.03
COPS7A-221ENST00000546229 NPIPB6E9PJ23 425 aa8.63□□□□□ -1.03
COPS7A-221ENST00000546229 H3BTX0 84 aa8.63□□□□□ -1.03
COPS7A-221ENST00000546229 TSC22D2O75157 780 aa8.63□□□□□ -1.03
COPS7A-221ENST00000546229 CT45A10P0DMU9 189 aa8.63□□□□□ -1.03
COPS7A-221ENST00000546229 HTN1P15515 57 aa8.63□□□□□ -1.03
COPS7A-221ENST00000546229 OPCMLQ14982 345 aa8.63□□□□□ -1.03
COPS7A-221ENST00000546229 PXDC1Q5TGL8 231 aa8.63□□□□□ -1.03
COPS7A-221ENST00000546229 TEPPQ6URK8 271 aa8.63□□□□□ -1.03
COPS7A-221ENST00000546229 LINC00305Q7Z4B0 112 aa8.63□□□□□ -1.03
COPS7A-221ENST00000546229 OR10J6PQ8NGY7 276 aa8.63□□□□□ -1.03
COPS7A-221ENST00000546229 GNPNAT1Q96EK6 184 aaPredicted RBP8.63□□□□□ -1.03
COPS7A-221ENST00000546229 C18orf15Q96N68 181 aa8.63□□□□□ -1.03
COPS7A-221ENST00000546229 SDHCQ99643 169 aaPredicted RBP8.63□□□□□ -1.03
COPS7A-221ENST00000546229 RBM38Q9H0Z9 239 aaKnown RBP8.63□□□□□ -1.03
COPS7A-221ENST00000546229 TMPRSS5Q9H3S3 457 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms