RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 RPL23P62829 140 aaKnown RBP7.02□□□□□ -1.28
CLIP1-218ENST00000545889 TMEM144Q7Z5S9 345 aa7.02□□□□□ -1.28
CLIP1-218ENST00000545889 TMEM242Q9NWH2 141 aa7.02□□□□□ -1.28
CLIP1-218ENST00000545889 NUP210LQ5VU65 1888 aa7.02□□□□□ -1.28
CLIP1-218ENST00000545889 TRGV1A0A0A0MS02 117 aa7.02□□□□□ -1.29
CLIP1-218ENST00000545889 H3BUT2 72 aa7.02□□□□□ -1.29
CLIP1-218ENST00000545889 NUPR1O60356 82 aa7.02□□□□□ -1.29
CLIP1-218ENST00000545889 IGFBP3P17936 291 aaPredicted RBP7.02□□□□□ -1.29
CLIP1-218ENST00000545889 GRNP28799 593 aaKnown RBP7.02□□□□□ -1.29
CLIP1-218ENST00000545889 NMUP48645 174 aa7.02□□□□□ -1.29
CLIP1-218ENST00000545889 RSPO1Q2MKA7 263 aaPredicted RBP7.02□□□□□ -1.29
CLIP1-218ENST00000545889 OR10J3Q5JRS4 329 aa7.02□□□□□ -1.29
CLIP1-218ENST00000545889 TMEM158Q8WZ71 300 aa7.02□□□□□ -1.29
CLIP1-218ENST00000545889 RTBDNQ9BSG5 229 aaPredicted RBP7.02□□□□□ -1.29
CLIP1-218ENST00000545889 TRAV21A0A0B4J279 112 aa7.02□□□□□ -1.29
CLIP1-218ENST00000545889 NDUFB8O95169 186 aa7.02□□□□□ -1.29
CLIP1-218ENST00000545889 IGLC2P0DOY2 106 aa7.02□□□□□ -1.29
CLIP1-218ENST00000545889 IGLC3P0DOY3 106 aa7.02□□□□□ -1.29
CLIP1-218ENST00000545889 GATA2P23769 480 aaPredicted RBP7.02□□□□□ -1.29
CLIP1-218ENST00000545889 FOXL2NBQ6ZUU3 175 aa7.02□□□□□ -1.29
CLIP1-218ENST00000545889 FAM89BQ8N5H3 189 aa7.02□□□□□ -1.29
CLIP1-218ENST00000545889 FER1L6-AS1Q8NA97 138 aa7.02□□□□□ -1.29
CLIP1-218ENST00000545889 FN1P02751 2386 aaKnown RBP7.02□□□□□ -1.29
CLIP1-218ENST00000545889 COL5A1P20908 1838 aaPredicted RBP7.02□□□□□ -1.29
CLIP1-218ENST00000545889 ZNF815PA8K554 130 aa7.02□□□□□ -1.29
CLIP1-218ENST00000545889 TMEM170BQ5T4T1 132 aa7.02□□□□□ -1.29
CLIP1-218ENST00000545889 SLC25A34Q6PIV7 304 aa7.02□□□□□ -1.29
CLIP1-218ENST00000545889 SEM1Q6ZVN7 128 aa7.02□□□□□ -1.29
CLIP1-218ENST00000545889 RNF5Q99942 180 aa7.02□□□□□ -1.29
CLIP1-218ENST00000545889 TM2D1Q9BX74 207 aa7.02□□□□□ -1.29
CLIP1-218ENST00000545889 TNRC6BQ9UPQ9 1833 aaKnown RBP7.01□□□□□ -1.29
CLIP1-218ENST00000545889 MUC21A0A0G2JKD1 596 aa7.01□□□□□ -1.29
CLIP1-218ENST00000545889 MUC21A0A140T8X8 626 aa7.01□□□□□ -1.29
CLIP1-218ENST00000545889 TMEM250H0YL14 139 aa7.01□□□□□ -1.29
CLIP1-218ENST00000545889 GCHFRP30047 84 aa7.01□□□□□ -1.29
CLIP1-218ENST00000545889 UBE2E1P51965 193 aa7.01□□□□□ -1.29
CLIP1-218ENST00000545889 SUPT4H1P63272 117 aaKnown RBP7.01□□□□□ -1.29
CLIP1-218ENST00000545889 PMCHL1Q16048 86 aa7.01□□□□□ -1.29
CLIP1-218ENST00000545889 C10orf55Q5SWW7 151 aa7.01□□□□□ -1.29
CLIP1-218ENST00000545889 PRELID3AQ96N28 172 aa7.01□□□□□ -1.29
CLIP1-218ENST00000545889 C2CD3Q4AC94 2353 aa7.01□□□□□ -1.29
CLIP1-218ENST00000545889 FABP5P3A8MUU1 101 aa7.01□□□□□ -1.29
CLIP1-218ENST00000545889 OVOL3O00110 214 aa7.01□□□□□ -1.29
CLIP1-218ENST00000545889 KLF17Q5JT82 389 aaPredicted RBP7.01□□□□□ -1.29
CLIP1-218ENST00000545889 SIGLEC15Q6ZMC9 328 aa7.01□□□□□ -1.29
CLIP1-218ENST00000545889 SS18L2Q9UHA2 77 aa7.01□□□□□ -1.29
CLIP1-218ENST00000545889 CELSR3Q9NYQ7 3312 aa7.01□□□□□ -1.29
CLIP1-218ENST00000545889 MT-ND6P03923 174 aa7.01□□□□□ -1.29
CLIP1-218ENST00000545889 CCL1P22362 96 aa7.01□□□□□ -1.29
CLIP1-218ENST00000545889 LYPD2Q6UXB3 125 aa7.01□□□□□ -1.29
CLIP1-218ENST00000545889 LHFPL4Q7Z7J7 247 aa7.01□□□□□ -1.29
CLIP1-218ENST00000545889 FAM169BQ8N8A8 192 aa7.01□□□□□ -1.29
CLIP1-218ENST00000545889 ASCL2Q99929 193 aa7.01□□□□□ -1.29
CLIP1-218ENST00000545889 USP9XQ93008 2570 aaPredicted RBP7.01□□□□□ -1.29
CLIP1-218ENST00000545889 IGKV1-27A0A075B6S5 117 aa7□□□□□ -1.29
CLIP1-218ENST00000545889 C7orf71A4D174 169 aa7□□□□□ -1.29
CLIP1-218ENST00000545889 H3BRM9 83 aa7□□□□□ -1.29
CLIP1-218ENST00000545889 OVOL1O14753 267 aa7□□□□□ -1.29
CLIP1-218ENST00000545889 ATP5LO75964 103 aa7□□□□□ -1.29
CLIP1-218ENST00000545889 CGB7P0DN87 165 aa7□□□□□ -1.29
CLIP1-218ENST00000545889 IGKV1-12A0A0C4DH73 117 aa7□□□□□ -1.29
CLIP1-218ENST00000545889 F5H768 121 aa7□□□□□ -1.29
CLIP1-218ENST00000545889 IGKV1D-12P01611 117 aa7□□□□□ -1.29
CLIP1-218ENST00000545889 TMEM187Q14656 261 aa7□□□□□ -1.29
CLIP1-218ENST00000545889 FAM90A2PQ658T7 463 aa7□□□□□ -1.29
CLIP1-218ENST00000545889 C1orf122Q6ZSJ8 110 aa7□□□□□ -1.29
CLIP1-218ENST00000545889 LRTM2Q8N967 370 aa7□□□□□ -1.29
CLIP1-218ENST00000545889 POLQO75417 2590 aa7□□□□□ -1.29
CLIP1-218ENST00000545889 C15orf61A6NNL5 157 aa7□□□□□ -1.29
CLIP1-218ENST00000545889 DNAL4O96015 105 aa7□□□□□ -1.29
CLIP1-218ENST00000545889 PFN1P07737 140 aaKnown RBP7□□□□□ -1.29
CLIP1-218ENST00000545889 SRIP30626 198 aa7□□□□□ -1.29
CLIP1-218ENST00000545889 ZNF497Q6ZNH5 498 aa7□□□□□ -1.29
CLIP1-218ENST00000545889 TMEM70Q9BUB7 260 aa7□□□□□ -1.29
CLIP1-218ENST00000545889 A6NJY4 79 aa7□□□□□ -1.29
CLIP1-218ENST00000545889 IGHV3-53P01767 116 aa7□□□□□ -1.29
CLIP1-218ENST00000545889 CGB3P0DN86 165 aa7□□□□□ -1.29
CLIP1-218ENST00000545889 PRCDQ00LT1 54 aa7□□□□□ -1.29
CLIP1-218ENST00000545889 TEX43Q6ZNM6 134 aa7□□□□□ -1.29
CLIP1-218ENST00000545889 PGPEP1LA6NFU8 196 aa6.99□□□□□ -1.29
CLIP1-218ENST00000545889 BUB1B-PAK6H3BSN5 160 aa6.99□□□□□ -1.29
CLIP1-218ENST00000545889 HLA-DQA1P01909 254 aa6.99□□□□□ -1.29
CLIP1-218ENST00000545889 LMO1P25800 156 aa6.99□□□□□ -1.29
CLIP1-218ENST00000545889 DEFB131AP59861 70 aa6.99□□□□□ -1.29
CLIP1-218ENST00000545889 DAD1P61803 113 aa6.99□□□□□ -1.29
CLIP1-218ENST00000545889 PET117Q6UWS5 81 aa6.99□□□□□ -1.29
CLIP1-218ENST00000545889 CIARTQ8N365 385 aaPredicted RBP6.99□□□□□ -1.29
CLIP1-218ENST00000545889 A6NDN8 102 aa6.99□□□□□ -1.29
CLIP1-218ENST00000545889 DUTP33316 252 aaKnown RBP6.99□□□□□ -1.29
CLIP1-218ENST00000545889 KIR3DL3Q8N743 410 aa6.99□□□□□ -1.29
CLIP1-218ENST00000545889 RCHY1Q96PM5 261 aa6.99□□□□□ -1.29
CLIP1-218ENST00000545889 RHPN1-AS1Q9BWJ2 59 aa6.99□□□□□ -1.29
CLIP1-218ENST00000545889 SPCS1Q9Y6A9 102 aa6.99□□□□□ -1.29
CLIP1-218ENST00000545889 FCN3O75636 299 aa6.99□□□□□ -1.29
CLIP1-218ENST00000545889 CA1P00915 261 aaPredicted RBP6.99□□□□□ -1.29
CLIP1-218ENST00000545889 CNTFRP26992 372 aa6.99□□□□□ -1.29
CLIP1-218ENST00000545889 RPL36AP83881 106 aaKnown RBP6.99□□□□□ -1.29
CLIP1-218ENST00000545889 RPL36ALQ969Q0 106 aaKnown RBP6.99□□□□□ -1.29
CLIP1-218ENST00000545889 SRSF8Q9BRL6 282 aaKnown RBP6.99□□□□□ -1.29
CLIP1-218ENST00000545889 ZNF581Q9P0T4 197 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms