RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 KRTAP2-3P0C7H8 128 aa0.52□□□□□ -2.33
YBX3-214ENST00000544501 TRGC1P0CF51 173 aa0.52□□□□□ -2.33
YBX3-214ENST00000544501 ARPP19P56211 112 aa0.52□□□□□ -2.33
YBX3-214ENST00000544501 UBA52P62987 128 aaKnown RBP0.52□□□□□ -2.33
YBX3-214ENST00000544501 SURF2Q15527 256 aaPredicted RBP0.52□□□□□ -2.33
YBX3-214ENST00000544501 C1orf195Q5TG92 126 aa0.52□□□□□ -2.33
YBX3-214ENST00000544501 FAM78BQ5VT40 261 aa0.52□□□□□ -2.33
YBX3-214ENST00000544501 PDPK2PQ6A1A2 396 aa0.52□□□□□ -2.33
YBX3-214ENST00000544501 FAM173BQ6P4H8 233 aa0.52□□□□□ -2.33
YBX3-214ENST00000544501 TNFAIP8L2Q6P589 184 aaPredicted RBP0.52□□□□□ -2.33
YBX3-214ENST00000544501 SBSNQ6UWP8 590 aa0.52□□□□□ -2.33
YBX3-214ENST00000544501 C5orf46Q6UWT4 87 aa0.52□□□□□ -2.33
YBX3-214ENST00000544501 PLEKHG7Q6ZR37 379 aa0.52□□□□□ -2.33
YBX3-214ENST00000544501 Q8N402 240 aa0.52□□□□□ -2.33
YBX3-214ENST00000544501 ZNF676Q8N7Q3 588 aa0.52□□□□□ -2.33
YBX3-214ENST00000544501 TMEM161BQ8NDZ6 487 aa0.52□□□□□ -2.33
YBX3-214ENST00000544501 DDI1Q8WTU0 396 aa0.52□□□□□ -2.33
YBX3-214ENST00000544501 CT55Q8WUE5 264 aa0.52□□□□□ -2.33
YBX3-214ENST00000544501 ACOT12Q8WYK0 555 aa0.52□□□□□ -2.33
YBX3-214ENST00000544501 TESCQ96BS2 214 aa0.52□□□□□ -2.33
YBX3-214ENST00000544501 ERMAPQ96PL5 475 aaPredicted RBP0.52□□□□□ -2.33
YBX3-214ENST00000544501 LLPHQ9BRT6 129 aaKnown RBP0.52□□□□□ -2.33
YBX3-214ENST00000544501 KRTAP2-4Q9BYR9 128 aa0.52□□□□□ -2.33
YBX3-214ENST00000544501 ULBP3Q9BZM4 244 aa0.52□□□□□ -2.33
YBX3-214ENST00000544501 MAP1LC3AQ9H492 121 aa0.52□□□□□ -2.33
YBX3-214ENST00000544501 IMP3Q9NV31 184 aaKnown RBP0.52□□□□□ -2.33
YBX3-214ENST00000544501 FGFR1OP2Q9NVK5 253 aa0.52□□□□□ -2.33
YBX3-214ENST00000544501 PLEKHJ1Q9NW61 149 aa0.52□□□□□ -2.33
YBX3-214ENST00000544501 FKBP14Q9NWM8 211 aa0.52□□□□□ -2.33
YBX3-214ENST00000544501 PAQR5Q9NXK6 330 aaPredicted RBP0.52□□□□□ -2.33
YBX3-214ENST00000544501 PRELID1Q9Y255 219 aa0.52□□□□□ -2.33
YBX3-214ENST00000544501 TIMM22Q9Y584 194 aa0.52□□□□□ -2.33
YBX3-214ENST00000544501 PXMP4Q9Y6I8 212 aa0.52□□□□□ -2.33
YBX3-214ENST00000544501 EXPH5Q8NEV8 1989 aa0.52□□□□□ -2.33
YBX3-214ENST00000544501 TRAV17A0A0B4J275 112 aa0.51□□□□□ -2.33
YBX3-214ENST00000544501 DISC1C4P0D8 188 aa0.51□□□□□ -2.33
YBX3-214ENST00000544501 H0Y980 276 aa0.51□□□□□ -2.33
YBX3-214ENST00000544501 GOLGA6L19H0YKK7 550 aa0.51□□□□□ -2.33
YBX3-214ENST00000544501 SSNA1O43805 119 aa0.51□□□□□ -2.33
YBX3-214ENST00000544501 HLA-DRAP01903 254 aa0.51□□□□□ -2.33
YBX3-214ENST00000544501 TNNC2P02585 160 aa0.51□□□□□ -2.33
YBX3-214ENST00000544501 FREM3P0C091 2139 aa0.51□□□□□ -2.33
YBX3-214ENST00000544501 UBBP0CG47 229 aa0.51□□□□□ -2.33
YBX3-214ENST00000544501 CCL1P22362 96 aa0.51□□□□□ -2.33
YBX3-214ENST00000544501 MSNP26038 577 aaKnown RBP0.51□□□□□ -2.33
YBX3-214ENST00000544501 HLA-DMBP28068 263 aa0.51□□□□□ -2.33
YBX3-214ENST00000544501 RPL12P30050 165 aaKnown RBP0.51□□□□□ -2.33
YBX3-214ENST00000544501 S100A7P31151 101 aa0.51□□□□□ -2.33
YBX3-214ENST00000544501 MYH10P35580 1976 aa0.51□□□□□ -2.33
YBX3-214ENST00000544501 CSN1S1P47710 185 aa0.51□□□□□ -2.33
YBX3-214ENST00000544501 TCL1AP56279 114 aa0.51□□□□□ -2.33
YBX3-214ENST00000544501 DEFA1P59665 94 aa0.51□□□□□ -2.33
YBX3-214ENST00000544501 POLR2GP62487 172 aaKnown RBP eCLIP0.51□□□□□ -2.33
YBX3-214ENST00000544501 MLLT11Q13015 90 aaPredicted RBP0.51□□□□□ -2.33
YBX3-214ENST00000544501 CDK5R1Q15078 307 aa0.51□□□□□ -2.33
YBX3-214ENST00000544501 COQ5Q5HYK3 327 aa0.51□□□□□ -2.33
YBX3-214ENST00000544501 FAM27BQ5VT28 67 aa0.51□□□□□ -2.33
YBX3-214ENST00000544501 SSX8Q7RTT4 187 aa0.51□□□□□ -2.33
YBX3-214ENST00000544501 C10orf67Q8IYJ2 551 aa0.51□□□□□ -2.33
YBX3-214ENST00000544501 FAM9CQ8IZT9 166 aa0.51□□□□□ -2.33
YBX3-214ENST00000544501 Q8N2B8 174 aa0.51□□□□□ -2.33
YBX3-214ENST00000544501 SLC22A24Q8N4F4 322 aa0.51□□□□□ -2.33
YBX3-214ENST00000544501 KLK6Q92876 244 aa0.51□□□□□ -2.33
YBX3-214ENST00000544501 CMTM5Q96DZ9 223 aa0.51□□□□□ -2.33
YBX3-214ENST00000544501 DIRAS2Q96HU8 199 aa0.51□□□□□ -2.33
YBX3-214ENST00000544501 FAM96AQ9H5X1 160 aa0.51□□□□□ -2.33
YBX3-214ENST00000544501 RSL24D1Q9UHA3 163 aaKnown RBP0.51□□□□□ -2.33
YBX3-214ENST00000544501 AK3Q9UIJ7 227 aa0.51□□□□□ -2.33
YBX3-214ENST00000544501 POLR1DQ9Y2S0 133 aa0.51□□□□□ -2.33
YBX3-214ENST00000544501 EML6Q6ZMW3 1958 aa0.5□□□□□ -2.33
YBX3-214ENST00000544501 ANAPC1Q9H1A4 1944 aa0.5□□□□□ -2.33
YBX3-214ENST00000544501 IGKV2D-26A0A0A0MRZ7 120 aa0.5□□□□□ -2.33
YBX3-214ENST00000544501 IGHV1-69-2A0A0G2JMI3 117 aa0.5□□□□□ -2.33
YBX3-214ENST00000544501 SPTY2D1-AS1A0A0U1RR47 76 aa0.5□□□□□ -2.33
YBX3-214ENST00000544501 TMEM212A6NML5 194 aa0.5□□□□□ -2.33
YBX3-214ENST00000544501 TRAPPC2LH3BP13 241 aa0.5□□□□□ -2.33
YBX3-214ENST00000544501 LST1O00453 97 aa0.5□□□□□ -2.33
YBX3-214ENST00000544501 ITGB1BP1O14713 200 aa0.5□□□□□ -2.33
YBX3-214ENST00000544501 LEPROTO15243 131 aa0.5□□□□□ -2.33
YBX3-214ENST00000544501 YEATS4O95619 227 aa0.5□□□□□ -2.33
YBX3-214ENST00000544501 APOEP02649 317 aa0.5□□□□□ -2.33
YBX3-214ENST00000544501 IL3P08700 152 aa0.5□□□□□ -2.33
YBX3-214ENST00000544501 MAGEA2P43356 314 aa0.5□□□□□ -2.33
YBX3-214ENST00000544501 CD151P48509 253 aa0.5□□□□□ -2.33
YBX3-214ENST00000544501 OR4D2P58180 307 aa0.5□□□□□ -2.33
YBX3-214ENST00000544501 FABP9Q0Z7S8 132 aa0.5□□□□□ -2.33
YBX3-214ENST00000544501 MED21Q13503 144 aa0.5□□□□□ -2.33
YBX3-214ENST00000544501 COTL1Q14019 142 aa0.5□□□□□ -2.33
YBX3-214ENST00000544501 NDUFA5Q16718 116 aa0.5□□□□□ -2.33
YBX3-214ENST00000544501 C1orf194Q5T5A4 169 aa0.5□□□□□ -2.33
YBX3-214ENST00000544501 KRTAP5-10Q6L8G5 202 aa0.5□□□□□ -2.33
YBX3-214ENST00000544501 C8orf74Q6P047 294 aa0.5□□□□□ -2.33
YBX3-214ENST00000544501 GID4Q8IVV7 300 aa0.5□□□□□ -2.33
YBX3-214ENST00000544501 C9orf163Q8N9P6 203 aa0.5□□□□□ -2.33
YBX3-214ENST00000544501 C15orf53Q8NAA6 179 aa0.5□□□□□ -2.33
YBX3-214ENST00000544501 OR2T4Q8NH00 348 aa0.5□□□□□ -2.33
YBX3-214ENST00000544501 OR8D2Q9GZM6 311 aa0.5□□□□□ -2.33
YBX3-214ENST00000544501 OR51I1Q9H343 314 aa0.5□□□□□ -2.33
YBX3-214ENST00000544501 OR51I2Q9H344 312 aa0.5□□□□□ -2.33
YBX3-214ENST00000544501 TCEAL2Q9H3H9 227 aaPredicted RBP0.5□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms