RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 LYPD1Q8N2G4 141 aa23.2■■□□□ 1.3
CCM2-219ENST00000544363 A0A087X0K7 114 aa23.19■■□□□ 1.3
CCM2-219ENST00000544363 ZNF727A8MUV8 499 aa23.19■■□□□ 1.3
CCM2-219ENST00000544363 KLF5Q13887 457 aaPredicted RBP23.19■■□□□ 1.3
CCM2-219ENST00000544363 C8orf86Q6ZUL3 223 aa23.19■■□□□ 1.3
CCM2-219ENST00000544363 SMIM7Q9BQ49 75 aa23.19■■□□□ 1.3
CCM2-219ENST00000544363 TCEAL7Q9BRU2 100 aa23.19■■□□□ 1.3
CCM2-219ENST00000544363 SMPXQ9UHP9 88 aa23.19■■□□□ 1.3
CCM2-219ENST00000544363 ZNF785A8K8V0 405 aa23.19■■□□□ 1.3
CCM2-219ENST00000544363 A8MWP6 167 aa23.19■■□□□ 1.3
CCM2-219ENST00000544363 SLC17A3O00476 420 aa23.19■■□□□ 1.3
CCM2-219ENST00000544363 SIGLEC15Q6ZMC9 328 aa23.19■■□□□ 1.3
CCM2-219ENST00000544363 NIPSNAP3BQ9BS92 247 aa23.19■■□□□ 1.3
CCM2-219ENST00000544363 A0A1B0GUS0 222 aa23.18■■□□□ 1.3
CCM2-219ENST00000544363 SLC25A5P05141 298 aaKnown RBP23.18■■□□□ 1.3
CCM2-219ENST00000544363 SLURP1P55000 103 aa23.18■■□□□ 1.3
CCM2-219ENST00000544363 RHPN1-AS1Q9BWJ2 59 aa23.18■■□□□ 1.3
CCM2-219ENST00000544363 TMEM213A2RRL7 107 aa23.17■■□□□ 1.3
CCM2-219ENST00000544363 EXOC3-AS1Q8N2X6 119 aa23.17■■□□□ 1.3
CCM2-219ENST00000544363 DERL1Q9BUN8 251 aa23.17■■□□□ 1.3
CCM2-219ENST00000544363 A0A1W2PRX2 142 aa23.16■■□□□ 1.3
CCM2-219ENST00000544363 CHEK1O14757 476 aa23.16■■□□□ 1.3
CCM2-219ENST00000544363 ZNF253O75346 499 aa23.16■■□□□ 1.3
CCM2-219ENST00000544363 PSG9Q00887 426 aa23.16■■□□□ 1.3
CCM2-219ENST00000544363 C5orf17Q8NAS9 161 aa23.16■■□□□ 1.3
CCM2-219ENST00000544363 EPDR1Q9UM22 224 aa23.16■■□□□ 1.3
CCM2-219ENST00000544363 SNAPINO95295 136 aa23.15■■□□□ 1.3
CCM2-219ENST00000544363 C2CD4CQ8TF44 421 aa23.15■■□□□ 1.3
CCM2-219ENST00000544363 DUX3Q96PT4 197 aa23.15■■□□□ 1.3
CCM2-219ENST00000544363 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa23.15■■□□□ 1.3
CCM2-219ENST00000544363 HIST1H2BAQ96A08 127 aa23.15■■□□□ 1.3
CCM2-219ENST00000544363 PEX7O00628 323 aa23.14■■□□□ 1.29
CCM2-219ENST00000544363 EDN2P20800 178 aa23.14■■□□□ 1.29
CCM2-219ENST00000544363 MEOX2P50222 304 aa23.14■■□□□ 1.29
CCM2-219ENST00000544363 TVP23CQ96ET8 276 aa23.14■■□□□ 1.29
CCM2-219ENST00000544363 RAX2Q96IS3 184 aa23.14■■□□□ 1.29
CCM2-219ENST00000544363 AAMDCQ9H7C9 122 aa23.14■■□□□ 1.29
CCM2-219ENST00000544363 BMI1P35226 326 aa23.13■■□□□ 1.29
CCM2-219ENST00000544363 GNG5P63218 68 aa23.13■■□□□ 1.29
CCM2-219ENST00000544363 CLRN3Q8NCR9 226 aa23.13■■□□□ 1.29
CCM2-219ENST00000544363 NAT8Q9UHE5 227 aa23.13■■□□□ 1.29
CCM2-219ENST00000544363 C2CD3Q4AC94 2353 aa23.12■■□□□ 1.29
CCM2-219ENST00000544363 TMEM241Q24JQ0 296 aa23.12■■□□□ 1.29
CCM2-219ENST00000544363 ATRAIDQ6UW56 229 aa23.12■■□□□ 1.29
CCM2-219ENST00000544363 CMTM2Q8TAZ6 248 aa23.12■■□□□ 1.29
CCM2-219ENST00000544363 SDF2L1Q9HCN8 221 aa23.12■■□□□ 1.29
CCM2-219ENST00000544363 RPL35P42766 123 aaKnown RBP23.11■■□□□ 1.29
CCM2-219ENST00000544363 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP23.11■■□□□ 1.29
CCM2-219ENST00000544363 ZNF331Q9NQX6 463 aaPredicted RBP23.11■■□□□ 1.29
CCM2-219ENST00000544363 HELTA6NFD8 242 aa23.11■■□□□ 1.29
CCM2-219ENST00000544363 KRTAP10-3P60369 221 aa23.11■■□□□ 1.29
CCM2-219ENST00000544363 FHL3Q13643 280 aa23.11■■□□□ 1.29
CCM2-219ENST00000544363 M0R036 132 aa23.1■■□□□ 1.29
CCM2-219ENST00000544363 CCL24O00175 119 aa23.1■■□□□ 1.29
CCM2-219ENST00000544363 AKR1C3P42330 323 aa23.1■■□□□ 1.29
CCM2-219ENST00000544363 SLC50A1Q9BRV3 221 aa23.1■■□□□ 1.29
CCM2-219ENST00000544363 ATG101Q9BSB4 218 aa23.1■■□□□ 1.29
CCM2-219ENST00000544363 C2orf70A6NJV1 201 aa23.09■■□□□ 1.29
CCM2-219ENST00000544363 TCRAP04437 139 aa23.09■■□□□ 1.29
CCM2-219ENST00000544363 DLX4Q92988 240 aaPredicted RBP23.09■■□□□ 1.29
CCM2-219ENST00000544363 RPH3ALQ9UNE2 315 aa23.09■■□□□ 1.29
CCM2-219ENST00000544363 CBLN1P23435 193 aa23.08■■□□□ 1.29
CCM2-219ENST00000544363 CNN1P51911 297 aaKnown RBP23.08■■□□□ 1.29
CCM2-219ENST00000544363 PNRC1Q12796 327 aaPredicted RBP23.08■■□□□ 1.29
CCM2-219ENST00000544363 FOXL1Q12952 345 aa23.08■■□□□ 1.29
CCM2-219ENST00000544363 AWAT1Q58HT5 328 aa23.08■■□□□ 1.29
CCM2-219ENST00000544363 PEMTQ9UBM1 199 aa23.08■■□□□ 1.29
CCM2-219ENST00000544363 ADARB2-AS1A8MUL3 147 aa23.08■■□□□ 1.28
CCM2-219ENST00000544363 SETD2Q9BYW2 2564 aaPredicted RBP23.07■■□□□ 1.28
CCM2-219ENST00000544363 TRBV20OR9-2A0A075B6H5 130 aa23.07■■□□□ 1.28
CCM2-219ENST00000544363 C9JCJ5 164 aa23.07■■□□□ 1.28
CCM2-219ENST00000544363 OR9G4Q8NGQ1 327 aa23.07■■□□□ 1.28
CCM2-219ENST00000544363 LINC00479Q96M42 142 aa23.07■■□□□ 1.28
CCM2-219ENST00000544363 M0R3E3 92 aa23.06■■□□□ 1.28
CCM2-219ENST00000544363 SCO1O75880 301 aa23.06■■□□□ 1.28
CCM2-219ENST00000544363 TCF24Q7RTU0 167 aa23.06■■□□□ 1.28
CCM2-219ENST00000544363 FOLR2P14207 255 aa23.05■■□□□ 1.28
CCM2-219ENST00000544363 TAS2R60P59551 318 aa23.05■■□□□ 1.28
CCM2-219ENST00000544363 RPL11P62913 178 aaKnown RBP23.05■■□□□ 1.28
CCM2-219ENST00000544363 IGFL4Q6B9Z1 124 aa23.05■■□□□ 1.28
CCM2-219ENST00000544363 ARL6IP6Q8N6S5 226 aa23.05■■□□□ 1.28
CCM2-219ENST00000544363 KLF12Q9Y4X4 402 aa23.05■■□□□ 1.28
CCM2-219ENST00000544363 CSN1S1P47710 185 aa23.04■■□□□ 1.28
CCM2-219ENST00000544363 RPL23P62829 140 aaKnown RBP23.04■■□□□ 1.28
CCM2-219ENST00000544363 NDUFA11Q86Y39 141 aa23.04■■□□□ 1.28
CCM2-219ENST00000544363 NRN1Q9NPD7 142 aa23.04■■□□□ 1.28
CCM2-219ENST00000544363 TRAV34A0A0B4J273 112 aa23.04■■□□□ 1.28
CCM2-219ENST00000544363 M0QZ24 198 aa23.04■■□□□ 1.28
CCM2-219ENST00000544363 HLA-DMBP28068 263 aa23.04■■□□□ 1.28
CCM2-219ENST00000544363 TRAV8-2A0A0B4J237 113 aa23.03■■□□□ 1.28
CCM2-219ENST00000544363 C7orf77A4D0Y5 90 aa23.03■■□□□ 1.28
CCM2-219ENST00000544363 DIRC3C9JPN6 131 aa23.03■■□□□ 1.28
CCM2-219ENST00000544363 RHEBQ15382 184 aa23.03■■□□□ 1.28
CCM2-219ENST00000544363 ADIRFQ15847 76 aa23.03■■□□□ 1.28
CCM2-219ENST00000544363 TMEM183BQ1AE95 376 aa23.03■■□□□ 1.28
CCM2-219ENST00000544363 NSUN5P1Q3KNT7 163 aa23.03■■□□□ 1.28
CCM2-219ENST00000544363 CENPWQ5EE01 88 aa23.03■■□□□ 1.28
CCM2-219ENST00000544363 ADAMTSL5Q6ZMM2 481 aa23.03■■□□□ 1.28
CCM2-219ENST00000544363 GOLT1AQ6ZVE7 132 aa23.03■■□□□ 1.28
CCM2-219ENST00000544363 PRELID1Q9Y255 219 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms