RNA–Protein interactions for RNA: ENST00000543721.1

LMO3-229, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 3,626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-229ENST00000543721 TSPAN13O95857 204 aa3.97□□□□□ -1.77
LMO3-229ENST00000543721 RPL27AP46776 148 aaKnown RBP3.97□□□□□ -1.77
LMO3-229ENST00000543721 FOXI1Q12951 378 aa3.97□□□□□ -1.77
LMO3-229ENST00000543721 PEAR1Q5VY43 1037 aaPredicted RBP3.97□□□□□ -1.77
LMO3-229ENST00000543721 COX8CQ7Z4L0 72 aa3.97□□□□□ -1.77
LMO3-229ENST00000543721 MYOZ3Q8TDC0 251 aa3.97□□□□□ -1.77
LMO3-229ENST00000543721 DLX4Q92988 240 aaPredicted RBP3.97□□□□□ -1.77
LMO3-229ENST00000543721 HIST1H4GQ99525 98 aa3.97□□□□□ -1.77
LMO3-229ENST00000543721 TPPP3Q9BW30 176 aa3.97□□□□□ -1.77
LMO3-229ENST00000543721 DKK2Q9UBU2 259 aa3.97□□□□□ -1.77
LMO3-229ENST00000543721 ZNF785A8K8V0 405 aa3.96□□□□□ -1.77
LMO3-229ENST00000543721 AGFG2O95081 481 aa3.96□□□□□ -1.77
LMO3-229ENST00000543721 PLNP26678 52 aa3.96□□□□□ -1.77
LMO3-229ENST00000543721 SMCPP49901 116 aaPredicted RBP3.96□□□□□ -1.77
LMO3-229ENST00000543721 LYZP61626 148 aa3.96□□□□□ -1.77
LMO3-229ENST00000543721 C3orf36Q3SXR2 165 aa3.96□□□□□ -1.77
LMO3-229ENST00000543721 AMN1Q8IY45 258 aa3.96□□□□□ -1.77
LMO3-229ENST00000543721 MDS2Q8NDY4 140 aa3.96□□□□□ -1.77
LMO3-229ENST00000543721 PPDPFLQ8WWR9 84 aa3.96□□□□□ -1.77
LMO3-229ENST00000543721 SRSF8Q9BRL6 282 aaKnown RBP3.96□□□□□ -1.77
LMO3-229ENST00000543721 HHLA3Q9XRX5 114 aa3.96□□□□□ -1.77
LMO3-229ENST00000543721 DYSFO75923 2080 aa3.96□□□□□ -1.77
LMO3-229ENST00000543721 PI4KAP42356 2102 aa3.96□□□□□ -1.77
LMO3-229ENST00000543721 TRAV8-1A0A0A6YYK1 113 aa3.96□□□□□ -1.78
LMO3-229ENST00000543721 K7ESF4 209 aa3.96□□□□□ -1.78
LMO3-229ENST00000543721 HOXA3O43365 443 aaPredicted RBP3.96□□□□□ -1.78
LMO3-229ENST00000543721 CEACAM4O75871 244 aa3.96□□□□□ -1.78
LMO3-229ENST00000543721 IL4P05112 153 aa3.96□□□□□ -1.78
LMO3-229ENST00000543721 FAM106CPP0CH98 169 aa3.96□□□□□ -1.78
LMO3-229ENST00000543721 GLRXP35754 106 aa3.96□□□□□ -1.78
LMO3-229ENST00000543721 LOXL1Q08397 574 aaPredicted RBP3.96□□□□□ -1.78
LMO3-229ENST00000543721 FAM106AQ4KMX7 169 aa3.96□□□□□ -1.78
LMO3-229ENST00000543721 ZC2HC1BQ5TFG8 222 aa3.96□□□□□ -1.78
LMO3-229ENST00000543721 SH2D6Q7Z4S9 175 aa3.96□□□□□ -1.78
LMO3-229ENST00000543721 TMEM158Q8WZ71 300 aa3.96□□□□□ -1.78
LMO3-229ENST00000543721 RASL11BQ9BPW5 248 aa3.96□□□□□ -1.78
LMO3-229ENST00000543721 HES7Q9BYE0 225 aa3.96□□□□□ -1.78
LMO3-229ENST00000543721 DEFB127Q9H1M4 99 aa3.96□□□□□ -1.78
LMO3-229ENST00000543721 ZNF71Q9NQZ8 489 aaPredicted RBP3.96□□□□□ -1.78
LMO3-229ENST00000543721 PRO0461Q9UI25 63 aa3.96□□□□□ -1.78
LMO3-229ENST00000543721 ERG28Q9UKR5 140 aa3.96□□□□□ -1.78
LMO3-229ENST00000543721 A0A1W2PPI3 338 aa3.96□□□□□ -1.78
LMO3-229ENST00000543721 WI2-2373I1.2A0A1W2PRP0 233 aa3.96□□□□□ -1.78
LMO3-229ENST00000543721 KLK10O43240 276 aa3.96□□□□□ -1.78
LMO3-229ENST00000543721 GRNP28799 593 aaKnown RBP3.96□□□□□ -1.78
LMO3-229ENST00000543721 LEPP41159 167 aa3.96□□□□□ -1.78
LMO3-229ENST00000543721 GAGE5Q13069 117 aa3.96□□□□□ -1.78
LMO3-229ENST00000543721 GAGE6Q13070 117 aa3.96□□□□□ -1.78
LMO3-229ENST00000543721 PRR31Q5SQ13 230 aa3.96□□□□□ -1.78
LMO3-229ENST00000543721 LINC00528Q8N1L1 170 aa3.96□□□□□ -1.78
LMO3-229ENST00000543721 RPEQ96AT9 228 aa3.96□□□□□ -1.78
LMO3-229ENST00000543721 GAFA1Q96PS6 74 aa3.96□□□□□ -1.78
LMO3-229ENST00000543721 SHANK2-AS3Q9BTD1 123 aa3.96□□□□□ -1.78
LMO3-229ENST00000543721 FSCN3Q9NQT6 498 aa3.96□□□□□ -1.78
LMO3-229ENST00000543721 HTTP42858 3142 aa3.96□□□□□ -1.78
LMO3-229ENST00000543721 TRBV20-1A0A075B6N2 111 aa3.95□□□□□ -1.78
LMO3-229ENST00000543721 CGB1A6NKQ9 187 aa3.95□□□□□ -1.78
LMO3-229ENST00000543721 K7ERJ3 54 aa3.95□□□□□ -1.78
LMO3-229ENST00000543721 NPYP01303 97 aa3.95□□□□□ -1.78
LMO3-229ENST00000543721 HOXA4Q00056 320 aaPredicted RBP3.95□□□□□ -1.78
LMO3-229ENST00000543721 Q8N8P6 123 aa3.95□□□□□ -1.78
LMO3-229ENST00000543721 SYT8Q8NBV8 401 aa3.95□□□□□ -1.78
LMO3-229ENST00000543721 FOXC2Q99958 501 aa3.95□□□□□ -1.78
LMO3-229ENST00000543721 MRPL36Q9P0J6 103 aaKnown RBP3.95□□□□□ -1.78
LMO3-229ENST00000543721 RALYQ9UKM9 306 aaKnown RBP3.95□□□□□ -1.78
LMO3-229ENST00000543721 FZR1Q9UM11 496 aa3.95□□□□□ -1.78
LMO3-229ENST00000543721 SELENOKQ9Y6D0 94 aa3.95□□□□□ -1.78
LMO3-229ENST00000543721 IGHV1-18A0A0C4DH31 117 aa3.95□□□□□ -1.78
LMO3-229ENST00000543721 EXOC3-AS1Q8N2X6 119 aa3.95□□□□□ -1.78
LMO3-229ENST00000543721 SPRR3Q9UBC9 169 aa3.95□□□□□ -1.78
LMO3-229ENST00000543721 CACNA1EQ15878 2313 aa3.95□□□□□ -1.78
LMO3-229ENST00000543721 TMEM213A2RRL7 107 aa3.95□□□□□ -1.78
LMO3-229ENST00000543721 H3BRN7 92 aa3.95□□□□□ -1.78
LMO3-229ENST00000543721 SCGB2A1O75556 95 aa3.95□□□□□ -1.78
LMO3-229ENST00000543721 IGLV2-23P01705 113 aa3.95□□□□□ -1.78
LMO3-229ENST00000543721 TNFAIP6P98066 277 aaPredicted RBP3.95□□□□□ -1.78
LMO3-229ENST00000543721 TEX36Q5VZQ5 186 aa3.95□□□□□ -1.78
LMO3-229ENST00000543721 PMS2CLQ68D20 193 aa3.95□□□□□ -1.78
LMO3-229ENST00000543721 ZFAND6Q6FIF0 208 aa3.95□□□□□ -1.78
LMO3-229ENST00000543721 SIGLEC15Q6ZMC9 328 aa3.95□□□□□ -1.78
LMO3-229ENST00000543721 GTSCR1Q86UQ5 136 aa3.95□□□□□ -1.78
LMO3-229ENST00000543721 CNEP1R1Q8N9A8 125 aa3.95□□□□□ -1.78
LMO3-229ENST00000543721 ANAPC13Q9BS18 74 aa3.95□□□□□ -1.78
LMO3-229ENST00000543721 A0A087WX48 190 aa3.94□□□□□ -1.78
LMO3-229ENST00000543721 IGKV2D-26A0A0A0MRZ7 120 aa3.94□□□□□ -1.78
LMO3-229ENST00000543721 TRAV12-1A0A0B4J245 112 aa3.94□□□□□ -1.78
LMO3-229ENST00000543721 SH2D1AO60880 128 aa3.94□□□□□ -1.78
LMO3-229ENST00000543721 CFIP05156 583 aa3.94□□□□□ -1.78
LMO3-229ENST00000543721 CFAP126Q5VTH2 177 aa3.94□□□□□ -1.78
LMO3-229ENST00000543721 Q6ZUT4 128 aa3.94□□□□□ -1.78
LMO3-229ENST00000543721 OR11H6Q8NGC7 330 aa3.94□□□□□ -1.78
LMO3-229ENST00000543721 CNFNQ9BYD5 112 aa3.94□□□□□ -1.78
LMO3-229ENST00000543721 RAB1BQ9H0U4 201 aa3.94□□□□□ -1.78
LMO3-229ENST00000543721 GVINP1Q7Z2Y8 2422 aa3.94□□□□□ -1.78
LMO3-229ENST00000543721 TNCP24821 2201 aa3.94□□□□□ -1.78
LMO3-229ENST00000543721 IGLV3-9A0A075B6K5 115 aa3.94□□□□□ -1.78
LMO3-229ENST00000543721 TRBV7-3A0A075B6L6 115 aa3.94□□□□□ -1.78
LMO3-229ENST00000543721 TMEM8BA6NDV4 472 aa3.94□□□□□ -1.78
LMO3-229ENST00000543721 E7EUB6 86 aa3.94□□□□□ -1.78
LMO3-229ENST00000543721 H3BTX0 84 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms