RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 LGALSLQ3ZCW2 172 aaPredicted RBP4.7□□□□□ -1.66
LTBR-212ENST00000543542 TMEM41BQ5BJD5 291 aa4.7□□□□□ -1.66
LTBR-212ENST00000543542 ACTL10Q5JWF8 245 aa4.7□□□□□ -1.66
LTBR-212ENST00000543542 IGFL4Q6B9Z1 124 aa4.7□□□□□ -1.66
LTBR-212ENST00000543542 EBLN2Q6P2I7 272 aa4.7□□□□□ -1.66
LTBR-212ENST00000543542 ZNF738Q8NE65 137 aa4.7□□□□□ -1.66
LTBR-212ENST00000543542 FAM110AQ9BQ89 295 aa4.7□□□□□ -1.66
LTBR-212ENST00000543542 SLC50A1Q9BRV3 221 aa4.7□□□□□ -1.66
LTBR-212ENST00000543542 SLC25A2Q9BXI2 301 aa4.7□□□□□ -1.66
LTBR-212ENST00000543542 OR51M1Q9H341 326 aa4.7□□□□□ -1.66
LTBR-212ENST00000543542 CYTL1Q9NRR1 136 aa4.7□□□□□ -1.66
LTBR-212ENST00000543542 PPP1R14DQ9NXH3 145 aa4.7□□□□□ -1.66
LTBR-212ENST00000543542 EIF3GO75821 320 aaKnown RBP eCLIP4.69□□□□□ -1.66
LTBR-212ENST00000543542 IGKV3-20P01619 116 aa4.69□□□□□ -1.66
LTBR-212ENST00000543542 HIST1H1EP10412 219 aaKnown RBP4.69□□□□□ -1.66
LTBR-212ENST00000543542 APOC4P55056 127 aa4.69□□□□□ -1.66
LTBR-212ENST00000543542 PSG9Q00887 426 aa4.69□□□□□ -1.66
LTBR-212ENST00000543542 EIF5AL1Q6IS14 154 aaKnown RBP4.69□□□□□ -1.66
LTBR-212ENST00000543542 BAP18Q8IXM2 172 aa4.69□□□□□ -1.66
LTBR-212ENST00000543542 RNF182Q8N6D2 247 aa4.69□□□□□ -1.66
LTBR-212ENST00000543542 OR4B1Q8NGF8 309 aa4.69□□□□□ -1.66
LTBR-212ENST00000543542 RNF141Q8WVD5 230 aa4.69□□□□□ -1.66
LTBR-212ENST00000543542 C17orf77Q96MU5 243 aa4.69□□□□□ -1.66
LTBR-212ENST00000543542 B9D2Q9BPU9 175 aa4.69□□□□□ -1.66
LTBR-212ENST00000543542 HRH4Q9H3N8 390 aa4.69□□□□□ -1.66
LTBR-212ENST00000543542 AAMDCQ9H7C9 122 aa4.69□□□□□ -1.66
LTBR-212ENST00000543542 ZMAT4Q9H898 229 aa4.69□□□□□ -1.66
LTBR-212ENST00000543542 C19orf73Q9NVV2 129 aa4.69□□□□□ -1.66
LTBR-212ENST00000543542 TMEM14CQ9P0S9 112 aa4.69□□□□□ -1.66
LTBR-212ENST00000543542 MEGF8Q7Z7M0 2845 aa4.69□□□□□ -1.66
LTBR-212ENST00000543542 SORL1Q92673 2214 aa4.69□□□□□ -1.66
LTBR-212ENST00000543542 MGAM2Q2M2H8 2515 aa4.68□□□□□ -1.66
LTBR-212ENST00000543542 FBN3Q75N90 2809 aa4.68□□□□□ -1.66
LTBR-212ENST00000543542 TRBV19A0A075B6N1 114 aa4.68□□□□□ -1.66
LTBR-212ENST00000543542 RBMY1BA6NDE4 496 aaKnown RBP4.68□□□□□ -1.66
LTBR-212ENST00000543542 RBMY1EA6NEQ0 496 aaKnown RBP4.68□□□□□ -1.66
LTBR-212ENST00000543542 A8MZ25 164 aa4.68□□□□□ -1.66
LTBR-212ENST00000543542 F6UB75 175 aa4.68□□□□□ -1.66
LTBR-212ENST00000543542 H3BQ15 152 aa4.68□□□□□ -1.66
LTBR-212ENST00000543542 SLC17A3O00476 420 aa4.68□□□□□ -1.66
LTBR-212ENST00000543542 SOCS3O14543 225 aa4.68□□□□□ -1.66
LTBR-212ENST00000543542 MRPS12O15235 138 aaKnown RBP4.68□□□□□ -1.66
LTBR-212ENST00000543542 DUSP14O95147 198 aaKnown RBP4.68□□□□□ -1.66
LTBR-212ENST00000543542 CXorf1O96002 111 aa4.68□□□□□ -1.66
LTBR-212ENST00000543542 NBEAP1P0C6P0 100 aa4.68□□□□□ -1.66
LTBR-212ENST00000543542 RBMY1DP0C7P1 496 aaKnown RBP4.68□□□□□ -1.66
LTBR-212ENST00000543542 SEC11BP0C7V7 166 aa4.68□□□□□ -1.66
LTBR-212ENST00000543542 IGLC2P0DOY2 106 aa4.68□□□□□ -1.66
LTBR-212ENST00000543542 HLA-DMBP28068 263 aa4.68□□□□□ -1.66
LTBR-212ENST00000543542 NKX2-5P52952 324 aaPredicted RBP4.68□□□□□ -1.66
LTBR-212ENST00000543542 NUTF2P61970 127 aaKnown RBP4.68□□□□□ -1.66
LTBR-212ENST00000543542 RANP62826 216 aaKnown RBP4.68□□□□□ -1.66
LTBR-212ENST00000543542 HIST1H1AQ02539 215 aaPredicted RBP4.68□□□□□ -1.66
LTBR-212ENST00000543542 PSG3Q16557 428 aa4.68□□□□□ -1.66
LTBR-212ENST00000543542 FAM74A1Q5RGS3 127 aa4.68□□□□□ -1.66
LTBR-212ENST00000543542 PQLC2Q6ZP29 291 aa4.68□□□□□ -1.66
LTBR-212ENST00000543542 FOXI2Q6ZQN5 318 aa4.68□□□□□ -1.66
LTBR-212ENST00000543542 SLC51BQ86UW2 128 aa4.68□□□□□ -1.66
LTBR-212ENST00000543542 C9orf62Q8N4C0 152 aa4.68□□□□□ -1.66
LTBR-212ENST00000543542 RPP25LQ8N5L8 163 aaKnown RBP4.68□□□□□ -1.66
LTBR-212ENST00000543542 STOML3Q8TAV4 291 aa4.68□□□□□ -1.66
LTBR-212ENST00000543542 FAM213BQ8TBF2 198 aa4.68□□□□□ -1.66
LTBR-212ENST00000543542 TMED6Q8WW62 240 aa4.68□□□□□ -1.66
LTBR-212ENST00000543542 RAB24Q969Q5 203 aa4.68□□□□□ -1.66
LTBR-212ENST00000543542 C20orf173Q96LM9 149 aa4.68□□□□□ -1.66
LTBR-212ENST00000543542 CITED4Q96RK1 184 aa4.68□□□□□ -1.66
LTBR-212ENST00000543542 ZNF331Q9NQX6 463 aaPredicted RBP4.68□□□□□ -1.66
LTBR-212ENST00000543542 ZNF586Q9NXT0 402 aa4.68□□□□□ -1.66
LTBR-212ENST00000543542 CLEC5AQ9NY25 188 aa4.68□□□□□ -1.66
LTBR-212ENST00000543542 NOTCH3Q9UM47 2321 aa4.67□□□□□ -1.66
LTBR-212ENST00000543542 TRAV8-2A0A0B4J237 113 aa4.67□□□□□ -1.66
LTBR-212ENST00000543542 CTXND1A0A1B0GTU2 59 aa4.67□□□□□ -1.66
LTBR-212ENST00000543542 MAP1LC3B2A6NCE7 125 aa4.67□□□□□ -1.66
LTBR-212ENST00000543542 ZNF705FA8MVS1 300 aaPredicted RBP4.67□□□□□ -1.66
LTBR-212ENST00000543542 UMAD1C9J7I0 102 aa4.67□□□□□ -1.66
LTBR-212ENST00000543542 ZNF253O75346 499 aa4.67□□□□□ -1.66
LTBR-212ENST00000543542 CA1P00915 261 aaPredicted RBP4.67□□□□□ -1.66
LTBR-212ENST00000543542 ZNF705DP0CH99 300 aaPredicted RBP4.67□□□□□ -1.66
LTBR-212ENST00000543542 ZNF705BP0CI00 300 aaPredicted RBP4.67□□□□□ -1.66
LTBR-212ENST00000543542 STAG3L2P0CL84 134 aa4.67□□□□□ -1.66
LTBR-212ENST00000543542 STAG3L3P0CL85 134 aa4.67□□□□□ -1.66
LTBR-212ENST00000543542 ARL14EPLP0DKL9 152 aa4.67□□□□□ -1.66
LTBR-212ENST00000543542 PRB4P10163 310 aaPredicted RBP4.67□□□□□ -1.66
LTBR-212ENST00000543542 CSN1S1P47710 185 aa4.67□□□□□ -1.66
LTBR-212ENST00000543542 FXYD7P58549 80 aa4.67□□□□□ -1.66
LTBR-212ENST00000543542 DEFB1P60022 68 aa4.67□□□□□ -1.66
LTBR-212ENST00000543542 PDE6HQ13956 83 aa4.67□□□□□ -1.66
LTBR-212ENST00000543542 ICAM4Q14773 271 aa4.67□□□□□ -1.66
LTBR-212ENST00000543542 HAGHQ16775 308 aa4.67□□□□□ -1.66
LTBR-212ENST00000543542 MORN3Q6PF18 240 aaPredicted RBP4.67□□□□□ -1.66
LTBR-212ENST00000543542 SBSPONQ8IVN8 264 aa4.67□□□□□ -1.66
LTBR-212ENST00000543542 EXOC3-AS1Q8N2X6 119 aa4.67□□□□□ -1.66
LTBR-212ENST00000543542 OR10J6PQ8NGY7 276 aa4.67□□□□□ -1.66
LTBR-212ENST00000543542 CMTM2Q8TAZ6 248 aa4.67□□□□□ -1.66
LTBR-212ENST00000543542 RPUSD4Q96CM3 377 aaKnown RBP4.67□□□□□ -1.66
LTBR-212ENST00000543542 FXYD5Q96DB9 178 aa4.67□□□□□ -1.66
LTBR-212ENST00000543542 FAM167A-AS1Q96KT0 104 aa4.67□□□□□ -1.66
LTBR-212ENST00000543542 SPATA25Q9BR10 227 aa4.67□□□□□ -1.66
LTBR-212ENST00000543542 MAP1LC3BQ9GZQ8 125 aa4.67□□□□□ -1.66
LTBR-212ENST00000543542 CSTL1Q9H114 145 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms