RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	IGKV1-39	P01597	117 aa		4.95	□□□□□ -1.62
CIT-213	ENST00000543324	IGLV1-40	P01703	118 aa		4.95	□□□□□ -1.62
CIT-213	ENST00000543324	HLA-DRB1	P01911	266 aa		4.95	□□□□□ -1.62
CIT-213	ENST00000543324	PF4	P02776	101 aa		4.95	□□□□□ -1.62
CIT-213	ENST00000543324	IGKV1D-39	P04432	117 aa		4.95	□□□□□ -1.62
CIT-213	ENST00000543324	GPX1	P07203	203 aa		4.95	□□□□□ -1.62
CIT-213	ENST00000543324	LOR	P23490	312 aa	Predicted RBP	4.95	□□□□□ -1.62
CIT-213	ENST00000543324	NPPC	P23582	126 aa		4.95	□□□□□ -1.62
CIT-213	ENST00000543324	MYCNOS	P40205	109 aa		4.95	□□□□□ -1.62
CIT-213	ENST00000543324	PTTG1IP	P53801	180 aa		4.95	□□□□□ -1.62
CIT-213	ENST00000543324	RHOB	P62745	196 aa		4.95	□□□□□ -1.62
CIT-213	ENST00000543324	GNB1	P62873	340 aa		4.95	□□□□□ -1.62
CIT-213	ENST00000543324	RHOG	P84095	191 aa		4.95	□□□□□ -1.62
CIT-213	ENST00000543324	HES1	Q14469	280 aa		4.95	□□□□□ -1.62
CIT-213	ENST00000543324	WDR73	Q6P4I2	378 aa		4.95	□□□□□ -1.62
CIT-213	ENST00000543324	C19orf35	Q6ZS72	473 aa		4.95	□□□□□ -1.62
CIT-213	ENST00000543324	C8orf86	Q6ZUL3	223 aa		4.95	□□□□□ -1.62
CIT-213	ENST00000543324	TCTEX1D1	Q8N7M0	179 aa		4.95	□□□□□ -1.62
CIT-213	ENST00000543324	STPG4	Q8N801	248 aa		4.95	□□□□□ -1.62
CIT-213	ENST00000543324	NPB	Q8NG41	125 aa		4.95	□□□□□ -1.62
CIT-213	ENST00000543324	OR10G9	Q8NGN4	311 aa		4.95	□□□□□ -1.62
CIT-213	ENST00000543324	OR10G7	Q8NGN6	311 aa		4.95	□□□□□ -1.62
CIT-213	ENST00000543324	SFRP2	Q96HF1	295 aa		4.95	□□□□□ -1.62
CIT-213	ENST00000543324	RAX2	Q96IS3	184 aa		4.95	□□□□□ -1.62
CIT-213	ENST00000543324	NABP2	Q9BQ15	211 aa		4.95	□□□□□ -1.62
CIT-213	ENST00000543324	GNB1L	Q9BYB4	327 aa		4.95	□□□□□ -1.62
CIT-213	ENST00000543324	KRTAP4-6	Q9BYQ5	205 aa		4.95	□□□□□ -1.62
CIT-213	ENST00000543324	MRPL18	Q9H0U6	180 aa	Known RBP	4.95	□□□□□ -1.62
CIT-213	ENST00000543324	RAB9B	Q9NP90	201 aa		4.95	□□□□□ -1.62
CIT-213	ENST00000543324	ZNF586	Q9NXT0	402 aa		4.95	□□□□□ -1.62
CIT-213	ENST00000543324	FBXL7	Q9UJT9	491 aa		4.95	□□□□□ -1.62
CIT-213	ENST00000543324	PAM16	Q9Y3D7	125 aa		4.95	□□□□□ -1.62
CIT-213	ENST00000543324	OR2W1	Q9Y3N9	320 aa		4.95	□□□□□ -1.62
CIT-213	ENST00000543324	ARL2-SNX15	V9GYD0	113 aa		4.95	□□□□□ -1.62
CIT-213	ENST00000543324	TNC	P24821	2201 aa		4.95	□□□□□ -1.62
CIT-213	ENST00000543324	SORL1	Q92673	2214 aa		4.95	□□□□□ -1.62
CIT-213	ENST00000543324	IGHV7-81	A0A0B4J1V7	117 aa		4.94	□□□□□ -1.62
CIT-213	ENST00000543324	IGKV1-6	A0A0C4DH72	117 aa		4.94	□□□□□ -1.62
CIT-213	ENST00000543324	UBE2L5P	A0A1B0GUS4	154 aa		4.94	□□□□□ -1.62
CIT-213	ENST00000543324	DIRC3	C9JPN6	131 aa		4.94	□□□□□ -1.62
CIT-213	ENST00000543324	C11orf94	C9JXX5	98 aa		4.94	□□□□□ -1.62
CIT-213	ENST00000543324		H3BP45	60 aa		4.94	□□□□□ -1.62
CIT-213	ENST00000543324	PAGE4	O60829	102 aa		4.94	□□□□□ -1.62
CIT-213	ENST00000543324	ZNF253	O75346	499 aa		4.94	□□□□□ -1.62
CIT-213	ENST00000543324	PROP1	O75360	226 aa		4.94	□□□□□ -1.62
CIT-213	ENST00000543324	SERF1A	O75920	110 aa		4.94	□□□□□ -1.62
CIT-213	ENST00000543324	IGKV1-5	P01602	117 aa		4.94	□□□□□ -1.62
CIT-213	ENST00000543324	SERPINE2	P07093	398 aa		4.94	□□□□□ -1.62
CIT-213	ENST00000543324	ELANE	P08246	267 aa		4.94	□□□□□ -1.62
CIT-213	ENST00000543324	OR10J4	P0C629	311 aa		4.94	□□□□□ -1.62
CIT-213	ENST00000543324		P0C879	139 aa		4.94	□□□□□ -1.62
CIT-213	ENST00000543324	SAA2	P0DJI9	122 aa	Predicted RBP	4.94	□□□□□ -1.62
CIT-213	ENST00000543324	CDC34	P49427	236 aa	Predicted RBP	4.94	□□□□□ -1.62
CIT-213	ENST00000543324	HNRNPA3	P51991	378 aa	Known RBP	4.94	□□□□□ -1.62
CIT-213	ENST00000543324	SUMO1	P63165	101 aa	Known RBP	4.94	□□□□□ -1.62
CIT-213	ENST00000543324	RPP30	P78346	268 aa	Known RBP	4.94	□□□□□ -1.62
CIT-213	ENST00000543324	NDP	Q00604	133 aa		4.94	□□□□□ -1.62
CIT-213	ENST00000543324	PMCHL1	Q16048	86 aa		4.94	□□□□□ -1.62
CIT-213	ENST00000543324	TDRG1	Q3Y452	100 aa		4.94	□□□□□ -1.62
CIT-213	ENST00000543324	SPATA45	Q537H7	98 aa		4.94	□□□□□ -1.62
CIT-213	ENST00000543324	CST9LP1	Q5W188	147 aa		4.94	□□□□□ -1.62
CIT-213	ENST00000543324		Q6ZRM9	215 aa		4.94	□□□□□ -1.62
CIT-213	ENST00000543324	MOB1B	Q7L9L4	216 aa		4.94	□□□□□ -1.62
CIT-213	ENST00000543324	MOB3B	Q86TA1	216 aa		4.94	□□□□□ -1.62
CIT-213	ENST00000543324	ZNF575	Q86XF7	245 aa		4.94	□□□□□ -1.62
CIT-213	ENST00000543324	ZBTB34	Q8NCN2	500 aa		4.94	□□□□□ -1.62
CIT-213	ENST00000543324	KLHL30-AS1	Q8NEE0	82 aa		4.94	□□□□□ -1.62
CIT-213	ENST00000543324	OR52L2P	Q8NGH6	319 aa		4.94	□□□□□ -1.62
CIT-213	ENST00000543324	OR10V1	Q8NGI7	309 aa		4.94	□□□□□ -1.62
CIT-213	ENST00000543324	OR10G8	Q8NGN5	311 aa		4.94	□□□□□ -1.62
CIT-213	ENST00000543324	VN1R17P	Q8TDU5	208 aa		4.94	□□□□□ -1.62
CIT-213	ENST00000543324	C4orf3	Q8WVX3	66 aa		4.94	□□□□□ -1.62
CIT-213	ENST00000543324	C11orf52	Q96A22	123 aa		4.94	□□□□□ -1.62
CIT-213	ENST00000543324	RITA1	Q96K30	269 aa		4.94	□□□□□ -1.62
CIT-213	ENST00000543324	KCNS1	Q96KK3	526 aa		4.94	□□□□□ -1.62
CIT-213	ENST00000543324	ALKBH7	Q9BT30	221 aa	Predicted RBP	4.94	□□□□□ -1.62
CIT-213	ENST00000543324	MRPL20	Q9BYC9	149 aa	Known RBP	4.94	□□□□□ -1.62
CIT-213	ENST00000543324	SLC25A22	Q9H936	323 aa		4.94	□□□□□ -1.62
CIT-213	ENST00000543324	SLC35D1	Q9NTN3	355 aa		4.94	□□□□□ -1.62
CIT-213	ENST00000543324	BET1L	Q9NYM9	111 aa		4.94	□□□□□ -1.62
CIT-213	ENST00000543324	GNG12	Q9UBI6	72 aa		4.94	□□□□□ -1.62
CIT-213	ENST00000543324	CACNG5	Q9UF02	275 aa		4.94	□□□□□ -1.62
CIT-213	ENST00000543324	LINC00527	Q9UJ94	153 aa		4.94	□□□□□ -1.62
CIT-213	ENST00000543324	TRAPPC2L	Q9UL33	140 aa		4.94	□□□□□ -1.62
CIT-213	ENST00000543324	FAT1	Q14517	4588 aa		4.94	□□□□□ -1.62
CIT-213	ENST00000543324	IGLC7	A0M8Q6	106 aa		4.93	□□□□□ -1.62
CIT-213	ENST00000543324	CCL24	O00175	119 aa		4.93	□□□□□ -1.62
CIT-213	ENST00000543324	MPDU1	O75352	247 aa		4.93	□□□□□ -1.62
CIT-213	ENST00000543324	HYPM	O75409	117 aa		4.93	□□□□□ -1.62
CIT-213	ENST00000543324	SCT	P09683	121 aa		4.93	□□□□□ -1.62
CIT-213	ENST00000543324	INAFM2	P0DMQ5	153 aa		4.93	□□□□□ -1.62
CIT-213	ENST00000543324	PRB4	P10163	310 aa	Predicted RBP	4.93	□□□□□ -1.62
CIT-213	ENST00000543324	IAPP	P10997	89 aa		4.93	□□□□□ -1.62
CIT-213	ENST00000543324	AREG	P15514	252 aa		4.93	□□□□□ -1.62
CIT-213	ENST00000543324	CNTFR	P26992	372 aa		4.93	□□□□□ -1.62
CIT-213	ENST00000543324	TFPI2	P48307	235 aa		4.93	□□□□□ -1.62
CIT-213	ENST00000543324	SLC35B1	P78383	322 aa		4.93	□□□□□ -1.62
CIT-213	ENST00000543324	MMD	Q15546	238 aa		4.93	□□□□□ -1.62
CIT-213	ENST00000543324	C5orf64	Q2M2E5	130 aa		4.93	□□□□□ -1.62
CIT-213	ENST00000543324	FFAR4	Q5NUL3	377 aa		4.93	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms