RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 OPRK1P41145 380 aa3.88□□□□□ -1.79
CLIP1-217ENST00000543205 LEPP41159 167 aa3.88□□□□□ -1.79
CLIP1-217ENST00000543205 LAGE3Q14657 143 aa3.88□□□□□ -1.79
CLIP1-217ENST00000543205 ODF3L2Q3SX64 289 aa3.88□□□□□ -1.79
CLIP1-217ENST00000543205 C2orf83Q53S99 150 aa3.88□□□□□ -1.79
CLIP1-217ENST00000543205 Q56UQ5 140 aa3.88□□□□□ -1.79
CLIP1-217ENST00000543205 CLEC19AQ6UXS0 136 aa3.88□□□□□ -1.79
CLIP1-217ENST00000543205 Q6ZVQ6 151 aa3.88□□□□□ -1.79
CLIP1-217ENST00000543205 UBAC2Q8NBM4 344 aa3.88□□□□□ -1.79
CLIP1-217ENST00000543205 C21orf62Q9NYP8 219 aa3.88□□□□□ -1.79
CLIP1-217ENST00000543205 ALG5Q9Y673 324 aa3.88□□□□□ -1.79
CLIP1-217ENST00000543205 C7orf66A4D0T2 115 aa3.88□□□□□ -1.79
CLIP1-217ENST00000543205 PPP5D1E7EU14 171 aa3.88□□□□□ -1.79
CLIP1-217ENST00000543205 I3L2K1 104 aa3.88□□□□□ -1.79
CLIP1-217ENST00000543205 K7EIM0 57 aa3.88□□□□□ -1.79
CLIP1-217ENST00000543205 GATCO43716 136 aaKnown RBP3.88□□□□□ -1.79
CLIP1-217ENST00000543205 GGCTO75223 188 aaKnown RBP3.88□□□□□ -1.79
CLIP1-217ENST00000543205 SIX6O95475 246 aa3.88□□□□□ -1.79
CLIP1-217ENST00000543205 TRBV12-3P01733 135 aa3.88□□□□□ -1.79
CLIP1-217ENST00000543205 IFNA4P05014 189 aa3.88□□□□□ -1.79
CLIP1-217ENST00000543205 S100A10P60903 97 aa3.88□□□□□ -1.79
CLIP1-217ENST00000543205 S100A12P80511 92 aa3.88□□□□□ -1.79
CLIP1-217ENST00000543205 CYCSP99999 105 aaKnown RBP3.88□□□□□ -1.79
CLIP1-217ENST00000543205 RIGQ13278 110 aa3.88□□□□□ -1.79
CLIP1-217ENST00000543205 OXA1LQ15070 435 aa3.88□□□□□ -1.79
CLIP1-217ENST00000543205 BSXQ3C1V8 233 aa3.88□□□□□ -1.79
CLIP1-217ENST00000543205 SPANXN5Q5MJ07 72 aa3.88□□□□□ -1.79
CLIP1-217ENST00000543205 C11orf87Q6NUJ2 197 aa3.88□□□□□ -1.79
CLIP1-217ENST00000543205 C11orf45Q8TAV5 145 aa3.88□□□□□ -1.79
CLIP1-217ENST00000543205 ZNF502Q8TBZ5 544 aa3.88□□□□□ -1.79
CLIP1-217ENST00000543205 PTH2Q96A98 100 aa3.88□□□□□ -1.79
CLIP1-217ENST00000543205 MED28Q9H204 178 aa3.88□□□□□ -1.79
CLIP1-217ENST00000543205 PSENENQ9NZ42 101 aa3.88□□□□□ -1.79
CLIP1-217ENST00000543205 LSM5Q9Y4Y9 91 aaKnown RBP3.88□□□□□ -1.79
CLIP1-217ENST00000543205 WNK1Q9H4A3 2382 aa3.88□□□□□ -1.79
CLIP1-217ENST00000543205 OR2T8A6NH00 312 aa3.87□□□□□ -1.79
CLIP1-217ENST00000543205 BMPR1BO00238 502 aa3.87□□□□□ -1.79
CLIP1-217ENST00000543205 OVOL1O14753 267 aa3.87□□□□□ -1.79
CLIP1-217ENST00000543205 GNG7O60262 68 aa3.87□□□□□ -1.79
CLIP1-217ENST00000543205 JTBO76095 146 aa3.87□□□□□ -1.79
CLIP1-217ENST00000543205 IGHV3-48P01763 117 aa3.87□□□□□ -1.79
CLIP1-217ENST00000543205 PVALBP20472 110 aaPredicted RBP3.87□□□□□ -1.79
CLIP1-217ENST00000543205 GPR183P32249 361 aa3.87□□□□□ -1.79
CLIP1-217ENST00000543205 PAFAH1B2P68402 229 aa3.87□□□□□ -1.79
CLIP1-217ENST00000543205 PVRIGQ6DKI7 326 aa3.87□□□□□ -1.79
CLIP1-217ENST00000543205 DCUN1D4Q92564 292 aa3.87□□□□□ -1.79
CLIP1-217ENST00000543205 SMIM8Q96KF7 97 aa3.87□□□□□ -1.79
CLIP1-217ENST00000543205 NMES1Q9C002 83 aa3.87□□□□□ -1.79
CLIP1-217ENST00000543205 H3BP45 60 aa3.87□□□□□ -1.79
CLIP1-217ENST00000543205 K7EPK0 472 aa3.87□□□□□ -1.79
CLIP1-217ENST00000543205 NUPL2O15504 423 aaKnown RBP3.87□□□□□ -1.79
CLIP1-217ENST00000543205 RLN2P04090 185 aa3.87□□□□□ -1.79
CLIP1-217ENST00000543205 SLC25A4P12235 298 aa3.87□□□□□ -1.79
CLIP1-217ENST00000543205 SYNJ2BPP57105 145 aa3.87□□□□□ -1.79
CLIP1-217ENST00000543205 TAS2R30P59541 319 aa3.87□□□□□ -1.79
CLIP1-217ENST00000543205 FAM106AQ4KMX7 169 aa3.87□□□□□ -1.79
CLIP1-217ENST00000543205 GCSAMLQ5JQS6 135 aa3.87□□□□□ -1.79
CLIP1-217ENST00000543205 SPSB3Q6PJ21 355 aa3.87□□□□□ -1.79
CLIP1-217ENST00000543205 WFDC9Q8NEX5 89 aa3.87□□□□□ -1.79
CLIP1-217ENST00000543205 OR4C12Q96R67 309 aa3.87□□□□□ -1.79
CLIP1-217ENST00000543205 TRAV30A0A087WSZ9 112 aa3.86□□□□□ -1.79
CLIP1-217ENST00000543205 IGHV4-28A0A0C4DH34 117 aa3.86□□□□□ -1.79
CLIP1-217ENST00000543205 SEC14L6B5MCN3 397 aa3.86□□□□□ -1.79
CLIP1-217ENST00000543205 ORM1P02763 201 aa3.86□□□□□ -1.79
CLIP1-217ENST00000543205 IGLL1P15814 213 aa3.86□□□□□ -1.79
CLIP1-217ENST00000543205 GPX4P36969 197 aaPredicted RBP3.86□□□□□ -1.79
CLIP1-217ENST00000543205 CAV2P51636 162 aa3.86□□□□□ -1.79
CLIP1-217ENST00000543205 H2BFSP57053 126 aa3.86□□□□□ -1.79
CLIP1-217ENST00000543205 IL15RAQ13261 267 aa3.86□□□□□ -1.79
CLIP1-217ENST00000543205 RAB31Q13636 194 aa3.86□□□□□ -1.79
CLIP1-217ENST00000543205 SLC16A13Q7RTY0 426 aa3.86□□□□□ -1.79
CLIP1-217ENST00000543205 FAM19A1Q7Z5A9 133 aa3.86□□□□□ -1.79
CLIP1-217ENST00000543205 GPHB5Q86YW7 130 aa3.86□□□□□ -1.79
CLIP1-217ENST00000543205 OR4X1Q8NH49 305 aa3.86□□□□□ -1.79
CLIP1-217ENST00000543205 RASL10AQ92737 203 aa3.86□□□□□ -1.79
CLIP1-217ENST00000543205 SLC35E1Q96K37 410 aa3.86□□□□□ -1.79
CLIP1-217ENST00000543205 IGHV3-35A0A0C4DH35 117 aa3.85□□□□□ -1.79
CLIP1-217ENST00000543205 F5H768 121 aa3.85□□□□□ -1.79
CLIP1-217ENST00000543205 DEDDO75618 318 aa3.85□□□□□ -1.79
CLIP1-217ENST00000543205 CTSGP08311 255 aa3.85□□□□□ -1.79
CLIP1-217ENST00000543205 RND2P52198 227 aa3.85□□□□□ -1.79
CLIP1-217ENST00000543205 PAX9P55771 341 aa3.85□□□□□ -1.79
CLIP1-217ENST00000543205 RRAS2P62070 204 aaPredicted RBP3.85□□□□□ -1.79
CLIP1-217ENST00000543205 FCN2Q15485 313 aa3.85□□□□□ -1.79
CLIP1-217ENST00000543205 C9orf66Q5T8R8 295 aa3.85□□□□□ -1.79
CLIP1-217ENST00000543205 OR8G2PQ6IF36 304 aa3.85□□□□□ -1.79
CLIP1-217ENST00000543205 PRSS54Q6PEW0 395 aa3.85□□□□□ -1.79
CLIP1-217ENST00000543205 OR10P1Q8NGE3 313 aa3.85□□□□□ -1.79
CLIP1-217ENST00000543205 ACY3Q96HD9 319 aa3.85□□□□□ -1.79
CLIP1-217ENST00000543205 ZNF436Q9C0F3 470 aaPredicted RBP3.85□□□□□ -1.79
CLIP1-217ENST00000543205 FAM24AA6NFZ4 105 aa3.85□□□□□ -1.79
CLIP1-217ENST00000543205 LGALS9O00182 355 aa3.85□□□□□ -1.79
CLIP1-217ENST00000543205 NDUFA4O00483 81 aa3.85□□□□□ -1.79
CLIP1-217ENST00000543205 YIF1AO95070 293 aa3.85□□□□□ -1.79
CLIP1-217ENST00000543205 METTL15P1P0C7V9 234 aa3.85□□□□□ -1.79
CLIP1-217ENST00000543205 CXCL3P19876 107 aa3.85□□□□□ -1.79
CLIP1-217ENST00000543205 RAB4AP20338 218 aa3.85□□□□□ -1.79
CLIP1-217ENST00000543205 OR10J1P30954 320 aa3.85□□□□□ -1.79
CLIP1-217ENST00000543205 INSL3P51460 131 aa3.85□□□□□ -1.79
CLIP1-217ENST00000543205 AKR1C1Q04828 323 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms