RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 SMPXQ9UHP9 88 aa10.09□□□□□ -0.79
CHFR-221ENST00000542714 UFC1Q9Y3C8 167 aa10.09□□□□□ -0.79
CHFR-221ENST00000542714 TSSC4Q9Y5U2 329 aaPredicted RBP10.09□□□□□ -0.79
CHFR-221ENST00000542714 CHEK1O14757 476 aa10.08□□□□□ -0.8
CHFR-221ENST00000542714 APOC3P02656 99 aa10.08□□□□□ -0.8
CHFR-221ENST00000542714 FHL3Q13643 280 aa10.08□□□□□ -0.8
CHFR-221ENST00000542714 RPUSD4Q96CM3 377 aaKnown RBP10.08□□□□□ -0.8
CHFR-221ENST00000542714 DERL1Q9BUN8 251 aa10.08□□□□□ -0.8
CHFR-221ENST00000542714 OTORQ9NRC9 128 aa10.08□□□□□ -0.8
CHFR-221ENST00000542714 C2CD3Q4AC94 2353 aa10.08□□□□□ -0.8
CHFR-221ENST00000542714 PGPA6NDG6 321 aa10.07□□□□□ -0.8
CHFR-221ENST00000542714 ATF4P18848 351 aaPredicted RBP10.07□□□□□ -0.8
CHFR-221ENST00000542714 GALR1P47211 349 aa10.07□□□□□ -0.8
CHFR-221ENST00000542714 GNG5P63218 68 aa10.07□□□□□ -0.8
CHFR-221ENST00000542714 PDE6HQ13956 83 aa10.07□□□□□ -0.8
CHFR-221ENST00000542714 ADAMTSL5Q6ZMM2 481 aa10.07□□□□□ -0.8
CHFR-221ENST00000542714 EXOC3-AS1Q8N2X6 119 aa10.07□□□□□ -0.8
CHFR-221ENST00000542714 C2CD4CQ8TF44 421 aa10.07□□□□□ -0.8
CHFR-221ENST00000542714 DPF1Q92782 380 aa10.07□□□□□ -0.8
CHFR-221ENST00000542714 RHPN1-AS1Q9BWJ2 59 aa10.07□□□□□ -0.8
CHFR-221ENST00000542714 NKX6-2Q9C056 277 aaPredicted RBP10.07□□□□□ -0.8
CHFR-221ENST00000542714 PARLQ9H300 379 aa10.07□□□□□ -0.8
CHFR-221ENST00000542714 A0A1B0GUS0 222 aa10.06□□□□□ -0.8
CHFR-221ENST00000542714 A0A1W2PS18 150 aa10.06□□□□□ -0.8
CHFR-221ENST00000542714 ZNF785A8K8V0 405 aa10.06□□□□□ -0.8
CHFR-221ENST00000542714 ZNF253O75346 499 aa10.06□□□□□ -0.8
CHFR-221ENST00000542714 SLC25A5P05141 298 aaKnown RBP10.06□□□□□ -0.8
CHFR-221ENST00000542714 ATRAIDQ6UW56 229 aa10.06□□□□□ -0.8
CHFR-221ENST00000542714 DLX4Q92988 240 aaPredicted RBP10.06□□□□□ -0.8
CHFR-221ENST00000542714 GRAMD2BQ96HH9 432 aa10.06□□□□□ -0.8
CHFR-221ENST00000542714 SELENOKQ9Y6D0 94 aa10.06□□□□□ -0.8
CHFR-221ENST00000542714 C2orf70A6NJV1 201 aa10.05□□□□□ -0.8
CHFR-221ENST00000542714 ZNF727A8MUV8 499 aa10.05□□□□□ -0.8
CHFR-221ENST00000542714 CCL24O00175 119 aa10.05□□□□□ -0.8
CHFR-221ENST00000542714 PEX7O00628 323 aa10.05□□□□□ -0.8
CHFR-221ENST00000542714 HLA-DMBP28068 263 aa10.05□□□□□ -0.8
CHFR-221ENST00000542714 ZNF674Q2M3X9 581 aa10.05□□□□□ -0.8
CHFR-221ENST00000542714 LYPD1Q8N2G4 141 aa10.05□□□□□ -0.8
CHFR-221ENST00000542714 C5orf17Q8NAS9 161 aa10.05□□□□□ -0.8
CHFR-221ENST00000542714 SMIM7Q9BQ49 75 aa10.05□□□□□ -0.8
CHFR-221ENST00000542714 ZNF331Q9NQX6 463 aaPredicted RBP10.05□□□□□ -0.8
CHFR-221ENST00000542714 EPDR1Q9UM22 224 aa10.05□□□□□ -0.8
CHFR-221ENST00000542714 TRBV20OR9-2A0A075B6H5 130 aa10.04□□□□□ -0.8
CHFR-221ENST00000542714 TRAV8-2A0A0B4J237 113 aa10.04□□□□□ -0.8
CHFR-221ENST00000542714 SOCS3O14543 225 aa10.04□□□□□ -0.8
CHFR-221ENST00000542714 CBLN1P23435 193 aa10.04□□□□□ -0.8
CHFR-221ENST00000542714 PSG9Q00887 426 aa10.04□□□□□ -0.8
CHFR-221ENST00000542714 FAM74A3Q4VXF1 159 aa10.04□□□□□ -0.8
CHFR-221ENST00000542714 IGFL4Q6B9Z1 124 aa10.04□□□□□ -0.8
CHFR-221ENST00000542714 TCEAL7Q9BRU2 100 aa10.04□□□□□ -0.8
CHFR-221ENST00000542714 M0R3E3 92 aa10.03□□□□□ -0.8
CHFR-221ENST00000542714 TCRAP04437 139 aa10.03□□□□□ -0.8
CHFR-221ENST00000542714 CSN3P07498 182 aa10.03□□□□□ -0.8
CHFR-221ENST00000542714 PRB4P10163 310 aaPredicted RBP10.03□□□□□ -0.8
CHFR-221ENST00000542714 RPL35P42766 123 aaKnown RBP10.03□□□□□ -0.8
CHFR-221ENST00000542714 FOXL1Q12952 345 aa10.03□□□□□ -0.8
CHFR-221ENST00000542714 NSUN5P1Q3KNT7 163 aa10.03□□□□□ -0.8
CHFR-221ENST00000542714 TCF24Q7RTU0 167 aa10.03□□□□□ -0.8
CHFR-221ENST00000542714 NDUFA11Q86Y39 141 aa10.03□□□□□ -0.8
CHFR-221ENST00000542714 SVBPQ8N300 66 aa10.03□□□□□ -0.8
CHFR-221ENST00000542714 CLRN3Q8NCR9 226 aa10.03□□□□□ -0.8
CHFR-221ENST00000542714 OR9G4Q8NGQ1 327 aa10.03□□□□□ -0.8
CHFR-221ENST00000542714 HIST1H2BAQ96A08 127 aa10.03□□□□□ -0.8
CHFR-221ENST00000542714 IGF2BP2-AS1Q96M15 143 aa10.03□□□□□ -0.8
CHFR-221ENST00000542714 LINC00479Q96M42 142 aa10.03□□□□□ -0.8
CHFR-221ENST00000542714 SDF2L1Q9HCN8 221 aa10.03□□□□□ -0.8
CHFR-221ENST00000542714 MLXQ9UH92 298 aa10.03□□□□□ -0.8
CHFR-221ENST00000542714 RPH3ALQ9UNE2 315 aa10.03□□□□□ -0.8
CHFR-221ENST00000542714 HELTA6NFD8 242 aa10.02□□□□□ -0.81
CHFR-221ENST00000542714 SCO1O75880 301 aa10.02□□□□□ -0.81
CHFR-221ENST00000542714 FOLR2P14207 255 aa10.02□□□□□ -0.81
CHFR-221ENST00000542714 AKR1C3P42330 323 aa10.02□□□□□ -0.81
CHFR-221ENST00000542714 MEOX2P50222 304 aa10.02□□□□□ -0.81
CHFR-221ENST00000542714 KRTAP24-1Q3LI83 254 aa10.02□□□□□ -0.81
CHFR-221ENST00000542714 AWAT1Q58HT5 328 aa10.02□□□□□ -0.81
CHFR-221ENST00000542714 TVP23CQ96ET8 276 aa10.02□□□□□ -0.81
CHFR-221ENST00000542714 SLC50A1Q9BRV3 221 aa10.02□□□□□ -0.81
CHFR-221ENST00000542714 NIPSNAP3BQ9BS92 247 aa10.02□□□□□ -0.81
CHFR-221ENST00000542714 ATG101Q9BSB4 218 aa10.02□□□□□ -0.81
CHFR-221ENST00000542714 AAMDCQ9H7C9 122 aa10.02□□□□□ -0.81
CHFR-221ENST00000542714 NAT8Q9UHE5 227 aa10.02□□□□□ -0.81
CHFR-221ENST00000542714 TRAV34A0A0B4J273 112 aa10.01□□□□□ -0.81
CHFR-221ENST00000542714 PGPEP1LA6NFU8 196 aa10.01□□□□□ -0.81
CHFR-221ENST00000542714 C9JCJ5 164 aa10.01□□□□□ -0.81
CHFR-221ENST00000542714 DIRC3C9JPN6 131 aa10.01□□□□□ -0.81
CHFR-221ENST00000542714 ISLRO14498 428 aa10.01□□□□□ -0.81
CHFR-221ENST00000542714 BMI1P35226 326 aa10.01□□□□□ -0.81
CHFR-221ENST00000542714 RPL23P62829 140 aaKnown RBP10.01□□□□□ -0.81
CHFR-221ENST00000542714 TMEM241Q24JQ0 296 aa10.01□□□□□ -0.81
CHFR-221ENST00000542714 PRIMA1Q86XR5 153 aa10.01□□□□□ -0.81
CHFR-221ENST00000542714 RNF182Q8N6D2 247 aa10.01□□□□□ -0.81
CHFR-221ENST00000542714 C20orf173Q96LM9 149 aa10.01□□□□□ -0.81
CHFR-221ENST00000542714 PEMTQ9UBM1 199 aa10.01□□□□□ -0.81
CHFR-221ENST00000542714 KLF12Q9Y4X4 402 aa10.01□□□□□ -0.81
CHFR-221ENST00000542714 TEP1Q99973 2627 aaKnown RBP10□□□□□ -0.81
CHFR-221ENST00000542714 ZNF705FA8MVS1 300 aaPredicted RBP10□□□□□ -0.81
CHFR-221ENST00000542714 SNAPINO95295 136 aa10□□□□□ -0.81
CHFR-221ENST00000542714 IGLV2-11P01706 119 aa10□□□□□ -0.81
CHFR-221ENST00000542714 IGLV2-8P01709 118 aa10□□□□□ -0.81
CHFR-221ENST00000542714 CNN1P51911 297 aaKnown RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms