RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 HEATR1Q9H583 2144 aaKnown RBP6.42□□□□□ -1.38
PDLIM5-221ENST00000542407 A0A1W2PPM0 123 aa6.42□□□□□ -1.38
PDLIM5-221ENST00000542407 TMEM89A2RUT3 159 aa6.42□□□□□ -1.38
PDLIM5-221ENST00000542407 FAM90A26D6RGX4 464 aa6.42□□□□□ -1.38
PDLIM5-221ENST00000542407 FAM106CPP0CH98 169 aa6.42□□□□□ -1.38
PDLIM5-221ENST00000542407 COL8A1P27658 744 aa6.42□□□□□ -1.38
PDLIM5-221ENST00000542407 HTR1DP28221 377 aa6.42□□□□□ -1.38
PDLIM5-221ENST00000542407 FAM106AQ4KMX7 169 aa6.42□□□□□ -1.38
PDLIM5-221ENST00000542407 IBA57Q5T440 356 aaKnown RBP6.42□□□□□ -1.38
PDLIM5-221ENST00000542407 FAM159AQ6UWV7 190 aa6.42□□□□□ -1.38
PDLIM5-221ENST00000542407 FAM110DQ8TAY7 271 aaPredicted RBP6.42□□□□□ -1.38
PDLIM5-221ENST00000542407 RAI1Q7Z5J4 1906 aaPredicted RBP6.41□□□□□ -1.38
PDLIM5-221ENST00000542407 TRBV20-1A0A075B6N2 111 aa6.41□□□□□ -1.38
PDLIM5-221ENST00000542407 PRSS29PA6NIE9 313 aa6.41□□□□□ -1.38
PDLIM5-221ENST00000542407 RPL35AP18077 110 aaKnown RBP6.41□□□□□ -1.38
PDLIM5-221ENST00000542407 GPR183P32249 361 aa6.41□□□□□ -1.38
PDLIM5-221ENST00000542407 FOXA3P55318 350 aaPredicted RBP6.41□□□□□ -1.38
PDLIM5-221ENST00000542407 CDSNQ15517 529 aa6.41□□□□□ -1.38
PDLIM5-221ENST00000542407 RPEQ96AT9 228 aa6.41□□□□□ -1.38
PDLIM5-221ENST00000542407 TXNDC17Q9BRA2 123 aa6.41□□□□□ -1.38
PDLIM5-221ENST00000542407 RNF7Q9UBF6 113 aa6.41□□□□□ -1.38
PDLIM5-221ENST00000542407 PRO0628Q9UI54 55 aa6.41□□□□□ -1.38
PDLIM5-221ENST00000542407 HILPDAQ9Y5L2 63 aa6.41□□□□□ -1.38
PDLIM5-221ENST00000542407 TLN1Q9Y490 2541 aaKnown RBP6.41□□□□□ -1.38
PDLIM5-221ENST00000542407 TMEM8BA6NDV4 472 aa6.41□□□□□ -1.38
PDLIM5-221ENST00000542407 CGB3P0DN86 165 aa6.41□□□□□ -1.38
PDLIM5-221ENST00000542407 CGB7P0DN87 165 aa6.41□□□□□ -1.38
PDLIM5-221ENST00000542407 CD24P25063 80 aa6.41□□□□□ -1.38
PDLIM5-221ENST00000542407 REG1BP48304 166 aa6.41□□□□□ -1.38
PDLIM5-221ENST00000542407 LINC00205P59089 165 aa6.41□□□□□ -1.38
PDLIM5-221ENST00000542407 ADORA2A-AS1P86434 159 aa6.41□□□□□ -1.38
PDLIM5-221ENST00000542407 TEX36Q5VZQ5 186 aa6.41□□□□□ -1.38
PDLIM5-221ENST00000542407 LINC00528Q8N1L1 170 aa6.41□□□□□ -1.38
PDLIM5-221ENST00000542407 ZNF645Q8N7E2 425 aa6.41□□□□□ -1.38
PDLIM5-221ENST00000542407 ZNRF1Q8ND25 227 aa6.41□□□□□ -1.38
PDLIM5-221ENST00000542407 FAM168AQ92567 244 aa6.41□□□□□ -1.38
PDLIM5-221ENST00000542407 GAFA1Q96PS6 74 aa6.41□□□□□ -1.38
PDLIM5-221ENST00000542407 COMMD5Q9GZQ3 224 aa6.41□□□□□ -1.38
PDLIM5-221ENST00000542407 WDR83OSQ9Y284 106 aa6.41□□□□□ -1.38
PDLIM5-221ENST00000542407 CADP27708 2225 aa6.4□□□□□ -1.38
PDLIM5-221ENST00000542407 RELNP78509 3460 aa6.4□□□□□ -1.38
PDLIM5-221ENST00000542407 C17orf100A8MU93 164 aa6.4□□□□□ -1.38
PDLIM5-221ENST00000542407 F8W1H4 67 aa6.4□□□□□ -1.38
PDLIM5-221ENST00000542407 MGST3O14880 152 aa6.4□□□□□ -1.38
PDLIM5-221ENST00000542407 FABP2P12104 132 aa6.4□□□□□ -1.38
PDLIM5-221ENST00000542407 BRWD1-AS2P59051 145 aa6.4□□□□□ -1.38
PDLIM5-221ENST00000542407 SAP30LQ9HAJ7 183 aa6.4□□□□□ -1.38
PDLIM5-221ENST00000542407 USF3Q68DE3 2245 aa6.4□□□□□ -1.38
PDLIM5-221ENST00000542407 E7EQL1 145 aa6.4□□□□□ -1.39
PDLIM5-221ENST00000542407 RHODO00212 210 aa6.4□□□□□ -1.39
PDLIM5-221ENST00000542407 DLX6P56179 175 aa6.4□□□□□ -1.39
PDLIM5-221ENST00000542407 RPL30P62888 115 aaKnown RBP6.4□□□□□ -1.39
PDLIM5-221ENST00000542407 EDDM3AQ14507 147 aa6.4□□□□□ -1.39
PDLIM5-221ENST00000542407 Q8N7P7 452 aa6.4□□□□□ -1.39
PDLIM5-221ENST00000542407 C8orf31Q8N9H6 132 aa6.4□□□□□ -1.39
PDLIM5-221ENST00000542407 TMEM191AQ9H0A3 160 aa6.4□□□□□ -1.39
PDLIM5-221ENST00000542407 IDI2-AS1Q9NZ38 188 aa6.4□□□□□ -1.39
PDLIM5-221ENST00000542407 A0A1B0GX51 115 aa6.39□□□□□ -1.39
PDLIM5-221ENST00000542407 A8MZ25 164 aa6.39□□□□□ -1.39
PDLIM5-221ENST00000542407 C9JCJ5 164 aa6.39□□□□□ -1.39
PDLIM5-221ENST00000542407 SYS1-DBNDD2H3BUS1 97 aa6.39□□□□□ -1.39
PDLIM5-221ENST00000542407 LEPROTL1O95214 131 aa6.39□□□□□ -1.39
PDLIM5-221ENST00000542407 ORM2P19652 201 aa6.39□□□□□ -1.39
PDLIM5-221ENST00000542407 LOXL3P58215 753 aa6.39□□□□□ -1.39
PDLIM5-221ENST00000542407 C4orf26Q17RF5 130 aa6.39□□□□□ -1.39
PDLIM5-221ENST00000542407 BPIFA4PQ86YQ2 179 aa6.39□□□□□ -1.39
PDLIM5-221ENST00000542407 ZCCHC24Q8N2G6 241 aaKnown RBP6.39□□□□□ -1.39
PDLIM5-221ENST00000542407 ZNRF2Q8NHG8 242 aa6.39□□□□□ -1.39
PDLIM5-221ENST00000542407 C16orf92Q96LL3 132 aa6.39□□□□□ -1.39
PDLIM5-221ENST00000542407 MGST2Q99735 147 aa6.39□□□□□ -1.39
PDLIM5-221ENST00000542407 MS4A6AQ9H2W1 248 aa6.39□□□□□ -1.39
PDLIM5-221ENST00000542407 EDA2RQ9HAV5 297 aa6.39□□□□□ -1.39
PDLIM5-221ENST00000542407 ZNF355PQ9NSJ1 428 aa6.39□□□□□ -1.39
PDLIM5-221ENST00000542407 ADGRG4Q8IZF6 3080 aa6.39□□□□□ -1.39
PDLIM5-221ENST00000542407 KALRNO60229 2985 aa6.39□□□□□ -1.39
PDLIM5-221ENST00000542407 SPTBN4Q9H254 2564 aa6.39□□□□□ -1.39
PDLIM5-221ENST00000542407 IGHV3-43A0A0B4J1X8 118 aa6.39□□□□□ -1.39
PDLIM5-221ENST00000542407 IZUMO1RA6ND01 250 aa6.39□□□□□ -1.39
PDLIM5-221ENST00000542407 C15orf62A8K5M9 175 aa6.39□□□□□ -1.39
PDLIM5-221ENST00000542407 C17orf98A8MV24 154 aa6.39□□□□□ -1.39
PDLIM5-221ENST00000542407 P0C879 139 aa6.39□□□□□ -1.39
PDLIM5-221ENST00000542407 IGHV3-43DP0DP04 118 aa6.39□□□□□ -1.39
PDLIM5-221ENST00000542407 SRD5A1P18405 259 aa6.39□□□□□ -1.39
PDLIM5-221ENST00000542407 MALP21145 153 aa6.39□□□□□ -1.39
PDLIM5-221ENST00000542407 LOXP28300 417 aaPredicted RBP6.39□□□□□ -1.39
PDLIM5-221ENST00000542407 CCL8P80075 99 aa6.39□□□□□ -1.39
PDLIM5-221ENST00000542407 WFDC2Q14508 124 aa6.39□□□□□ -1.39
PDLIM5-221ENST00000542407 C17orf58Q2M2W7 97 aa6.39□□□□□ -1.39
PDLIM5-221ENST00000542407 SAMD5Q5TGI4 173 aa6.39□□□□□ -1.39
PDLIM5-221ENST00000542407 TREML4Q6UXN2 200 aa6.39□□□□□ -1.39
PDLIM5-221ENST00000542407 RFESDQ8TAC1 157 aa6.39□□□□□ -1.39
PDLIM5-221ENST00000542407 PLEKHA3Q9HB20 300 aa6.39□□□□□ -1.39
PDLIM5-221ENST00000542407 HEYLQ9NQ87 328 aaPredicted RBP6.39□□□□□ -1.39
PDLIM5-221ENST00000542407 ZNF257Q9Y2Q1 563 aa6.39□□□□□ -1.39
PDLIM5-221ENST00000542407 ITPR1Q14643 2758 aa6.39□□□□□ -1.39
PDLIM5-221ENST00000542407 CCL21O00585 134 aa6.39□□□□□ -1.39
PDLIM5-221ENST00000542407 PROP1O75360 226 aa6.39□□□□□ -1.39
PDLIM5-221ENST00000542407 INSL3P51460 131 aa6.39□□□□□ -1.39
PDLIM5-221ENST00000542407 VWC2Q2TAL6 325 aa6.39□□□□□ -1.39
PDLIM5-221ENST00000542407 ETDBQ3ZM63 59 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms