RNA–Protein interactions for RNA: ENST00000542188.5

TRPM1-203, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 6,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-203ENST00000542188 CSRP3P50461 194 aa11.45□□□□□ -0.58
TRPM1-203ENST00000542188 SRSF2Q01130 221 aaKnown RBP11.45□□□□□ -0.58
TRPM1-203ENST00000542188 IGFL4Q6B9Z1 124 aa11.45□□□□□ -0.58
TRPM1-203ENST00000542188 BAALC-AS2P0C853 105 aa11.45□□□□□ -0.58
TRPM1-203ENST00000542188 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.44□□□□□ -0.58
TRPM1-203ENST00000542188 C15orf62A8K5M9 175 aa11.44□□□□□ -0.58
TRPM1-203ENST00000542188 DAD1P61803 113 aa11.44□□□□□ -0.58
TRPM1-203ENST00000542188 TMEM219Q86XT9 240 aa11.44□□□□□ -0.58
TRPM1-203ENST00000542188 FUSP35637 526 aaKnown RBP eCLIP11.44□□□□□ -0.58
TRPM1-203ENST00000542188 PKIGQ9Y2B9 76 aa11.44□□□□□ -0.58
TRPM1-203ENST00000542188 PRSS29PA6NIE9 313 aa11.44□□□□□ -0.58
TRPM1-203ENST00000542188 ZNF883P0CG24 379 aa11.44□□□□□ -0.58
TRPM1-203ENST00000542188 SIGLEC9Q9Y336 463 aa11.44□□□□□ -0.58
TRPM1-203ENST00000542188 BUB1B-PAK6H3BSN5 160 aa11.44□□□□□ -0.58
TRPM1-203ENST00000542188 DKK1O94907 266 aa11.44□□□□□ -0.58
TRPM1-203ENST00000542188 NDUFB8O95169 186 aa11.44□□□□□ -0.58
TRPM1-203ENST00000542188 C12orf74Q32Q52 190 aa11.44□□□□□ -0.58
TRPM1-203ENST00000542188 SMIM20Q8N5G0 67 aa11.44□□□□□ -0.58
TRPM1-203ENST00000542188 SMCHD1A6NHR9 2005 aa11.44□□□□□ -0.58
TRPM1-203ENST00000542188 C22orf46C9J442 243 aa11.44□□□□□ -0.58
TRPM1-203ENST00000542188 IGHV2-70P01814 119 aa11.44□□□□□ -0.58
TRPM1-203ENST00000542188 CRYGCP07315 174 aa11.44□□□□□ -0.58
TRPM1-203ENST00000542188 RNASE2P10153 161 aaKnown RBP11.44□□□□□ -0.58
TRPM1-203ENST00000542188 MRPL51Q4U2R6 128 aaKnown RBP11.44□□□□□ -0.58
TRPM1-203ENST00000542188 KLHL30-AS1Q8NEE0 82 aa11.43□□□□□ -0.58
TRPM1-203ENST00000542188 HS3ST6Q96QI5 342 aa11.43□□□□□ -0.58
TRPM1-203ENST00000542188 RNF114Q9Y508 228 aa11.43□□□□□ -0.58
TRPM1-203ENST00000542188 IGKV1-12A0A0C4DH73 117 aa11.43□□□□□ -0.58
TRPM1-203ENST00000542188 J3QQQ9 107 aa11.43□□□□□ -0.58
TRPM1-203ENST00000542188 IGKV1D-12P01611 117 aa11.43□□□□□ -0.58
TRPM1-203ENST00000542188 LINC01545Q5VT33 79 aa11.43□□□□□ -0.58
TRPM1-203ENST00000542188 FOCADQ5VW36 1801 aa11.43□□□□□ -0.58
TRPM1-203ENST00000542188 ADAMTSL3P82987 1691 aa11.43□□□□□ -0.58
TRPM1-203ENST00000542188 A0A0B4J2C4 111 aa11.43□□□□□ -0.58
TRPM1-203ENST00000542188 F8VRH5 84 aa11.43□□□□□ -0.58
TRPM1-203ENST00000542188 EFNA4P52798 201 aa11.43□□□□□ -0.58
TRPM1-203ENST00000542188 ZNF672Q499Z4 452 aaPredicted RBP11.43□□□□□ -0.58
TRPM1-203ENST00000542188 ASCC3Q8N3C0 2202 aaKnown RBP11.43□□□□□ -0.58
TRPM1-203ENST00000542188 LYNX1G3V0Z9 82 aa11.43□□□□□ -0.58
TRPM1-203ENST00000542188 LYNX1P0DP58 116 aa11.43□□□□□ -0.58
TRPM1-203ENST00000542188 C8orf49Q96NF6 230 aa11.43□□□□□ -0.58
TRPM1-203ENST00000542188 SDHAF1A6NFY7 115 aa11.42□□□□□ -0.58
TRPM1-203ENST00000542188 TMEM178BH3BS89 294 aa11.42□□□□□ -0.58
TRPM1-203ENST00000542188 IGLL1P15814 213 aa11.42□□□□□ -0.58
TRPM1-203ENST00000542188 PSMB8P28062 276 aa11.42□□□□□ -0.58
TRPM1-203ENST00000542188 SEC61GP60059 68 aa11.42□□□□□ -0.58
TRPM1-203ENST00000542188 F5H768 121 aa11.42□□□□□ -0.58
TRPM1-203ENST00000542188 CFC1BP0CG36 223 aa11.42□□□□□ -0.58
TRPM1-203ENST00000542188 CFC1P0CG37 223 aa11.42□□□□□ -0.58
TRPM1-203ENST00000542188 ADCYAP1P18509 176 aa11.42□□□□□ -0.58
TRPM1-203ENST00000542188 Q6ZWC4 215 aa11.42□□□□□ -0.58
TRPM1-203ENST00000542188 AHDC1Q5TGY3 1603 aaPredicted RBP11.42□□□□□ -0.58
TRPM1-203ENST00000542188 SMIM27A0A1W2PRY6 76 aa11.41□□□□□ -0.58
TRPM1-203ENST00000542188 CGB3P0DN86 165 aa11.41□□□□□ -0.58
TRPM1-203ENST00000542188 TRPM6Q9BX84 2022 aa11.41□□□□□ -0.58
TRPM1-203ENST00000542188 K7ERJ3 54 aa11.41□□□□□ -0.58
TRPM1-203ENST00000542188 NDUFB1O75438 58 aa11.41□□□□□ -0.58
TRPM1-203ENST00000542188 DEFB131AP59861 70 aa11.41□□□□□ -0.58
TRPM1-203ENST00000542188 CD177Q8N6Q3 437 aa11.41□□□□□ -0.58
TRPM1-203ENST00000542188 IGHV1OR15-1A0A075B7D0 117 aa11.41□□□□□ -0.58
TRPM1-203ENST00000542188 ADAMTS7Q9UKP4 1686 aa11.41□□□□□ -0.58
TRPM1-203ENST00000542188 A0A1B0GX51 115 aa11.41□□□□□ -0.58
TRPM1-203ENST00000542188 H3BUX3 64 aa11.41□□□□□ -0.58
TRPM1-203ENST00000542188 TGFBR3LH3BV60 316 aa11.41□□□□□ -0.58
TRPM1-203ENST00000542188 FAM231DQ6ZW35 169 aa11.41□□□□□ -0.58
TRPM1-203ENST00000542188 ZCCHC24Q8N2G6 241 aaKnown RBP11.41□□□□□ -0.58
TRPM1-203ENST00000542188 FGFBP3Q8TAT2 258 aa11.41□□□□□ -0.58
TRPM1-203ENST00000542188 E9PLN8 166 aa11.4□□□□□ -0.58
TRPM1-203ENST00000542188 LYPD3O95274 346 aa11.4□□□□□ -0.58
TRPM1-203ENST00000542188 Q6ZS49 121 aa11.4□□□□□ -0.58
TRPM1-203ENST00000542188 COL18A1P39060 1754 aa11.4□□□□□ -0.58
TRPM1-203ENST00000542188 VWC2Q2TAL6 325 aa11.4□□□□□ -0.58
TRPM1-203ENST00000542188 CFHR4Q92496 578 aa11.4□□□□□ -0.58
TRPM1-203ENST00000542188 PYGO2Q9BRQ0 406 aa11.4□□□□□ -0.58
TRPM1-203ENST00000542188 MRPL35Q9NZE8 188 aaKnown RBP11.4□□□□□ -0.58
TRPM1-203ENST00000542188 B4DSR2 109 aa11.4□□□□□ -0.58
TRPM1-203ENST00000542188 KNL1Q8NG31 2342 aa11.4□□□□□ -0.58
TRPM1-203ENST00000542188 YPEL3P61236 119 aaPredicted RBP11.4□□□□□ -0.59
TRPM1-203ENST00000542188 C20orf78Q9BR46 151 aa11.4□□□□□ -0.59
TRPM1-203ENST00000542188 HERV-K104P63124 156 aa11.39□□□□□ -0.59
TRPM1-203ENST00000542188 RS1O15537 224 aa11.39□□□□□ -0.59
TRPM1-203ENST00000542188 ZNRF2Q8NHG8 242 aa11.39□□□□□ -0.59
TRPM1-203ENST00000542188 ARFGEF1Q9Y6D6 1849 aa11.39□□□□□ -0.59
TRPM1-203ENST00000542188 CGB7P0DN87 165 aa11.39□□□□□ -0.59
TRPM1-203ENST00000542188 C20orf204Q6ZNR8 217 aa11.39□□□□□ -0.59
TRPM1-203ENST00000542188 MRPL55Q7Z7F7 128 aaKnown RBP11.39□□□□□ -0.59
TRPM1-203ENST00000542188 C8orf31Q8N9H6 132 aa11.39□□□□□ -0.59
TRPM1-203ENST00000542188 GAFA1Q96PS6 74 aa11.39□□□□□ -0.59
TRPM1-203ENST00000542188 ZNF831Q5JPB2 1677 aa11.39□□□□□ -0.59
TRPM1-203ENST00000542188 CSRP2Q16527 193 aa11.39□□□□□ -0.59
TRPM1-203ENST00000542188 SIGLEC8Q9NYZ4 499 aa11.39□□□□□ -0.59
TRPM1-203ENST00000542188 IGHV3-16A0A0C4DH30 117 aa11.38□□□□□ -0.59
TRPM1-203ENST00000542188 LINC00473A8K010 186 aa11.38□□□□□ -0.59
TRPM1-203ENST00000542188 ANXA2RQ3ZCQ2 193 aa11.38□□□□□ -0.59
TRPM1-203ENST00000542188 MDS2Q8NDY4 140 aa11.38□□□□□ -0.59
TRPM1-203ENST00000542188 FAM110DQ8TAY7 271 aaPredicted RBP11.37□□□□□ -0.59
TRPM1-203ENST00000542188 LINC00479Q96M42 142 aa11.37□□□□□ -0.59
TRPM1-203ENST00000542188 IGKV1-27A0A075B6S5 117 aa11.37□□□□□ -0.59
TRPM1-203ENST00000542188 A0A087WV48 116 aa11.37□□□□□ -0.59
TRPM1-203ENST00000542188 SPRR3Q9UBC9 169 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms