RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 TMEM133Q9H2Q1 129 aa12.18□□□□□ -0.46
CNOT9-208ENST00000542068 ZFYVE26Q68DK2 2539 aa12.18□□□□□ -0.46
CNOT9-208ENST00000542068 IGHV2-70DA0A0C4DH43 119 aa12.18□□□□□ -0.46
CNOT9-208ENST00000542068 Q86TA4 180 aa12.18□□□□□ -0.46
CNOT9-208ENST00000542068 NCBP2LA6PVI3 153 aaKnown RBP12.17□□□□□ -0.46
CNOT9-208ENST00000542068 LTAP01374 205 aa12.17□□□□□ -0.46
CNOT9-208ENST00000542068 APOBEC3AP31941 199 aaPredicted RBP12.17□□□□□ -0.46
CNOT9-208ENST00000542068 KLRD1Q13241 179 aa12.17□□□□□ -0.46
CNOT9-208ENST00000542068 ST20Q9HBF5 79 aa12.17□□□□□ -0.46
CNOT9-208ENST00000542068 SHISA9B4DS77 424 aa12.17□□□□□ -0.46
CNOT9-208ENST00000542068 IGHV3-23P01764 117 aa12.17□□□□□ -0.46
CNOT9-208ENST00000542068 LIPFP07098 398 aa12.17□□□□□ -0.46
CNOT9-208ENST00000542068 LOXL1Q08397 574 aaPredicted RBP12.17□□□□□ -0.46
CNOT9-208ENST00000542068 RASL11BQ9BPW5 248 aa12.17□□□□□ -0.46
CNOT9-208ENST00000542068 DOPEY2Q9Y3R5 2298 aa12.17□□□□□ -0.46
CNOT9-208ENST00000542068 SLC25A39Q9BZJ4 359 aaPredicted RBP12.17□□□□□ -0.46
CNOT9-208ENST00000542068 NCOR1P1Q9H4R4 102 aa12.17□□□□□ -0.46
CNOT9-208ENST00000542068 AP5S1Q9NUS5 200 aa12.17□□□□□ -0.46
CNOT9-208ENST00000542068 BSNQ9UPA5 3926 aa12.16□□□□□ -0.46
CNOT9-208ENST00000542068 C19orf71A6NCJ1 209 aa12.16□□□□□ -0.46
CNOT9-208ENST00000542068 BCL6BQ8N143 479 aaPredicted RBP12.16□□□□□ -0.46
CNOT9-208ENST00000542068 C8orf46Q8TAG6 207 aa12.16□□□□□ -0.46
CNOT9-208ENST00000542068 PRSS22Q9GZN4 317 aa12.16□□□□□ -0.46
CNOT9-208ENST00000542068 HLA-DRB1P01911 266 aa12.16□□□□□ -0.46
CNOT9-208ENST00000542068 NHLH1Q02575 133 aa12.16□□□□□ -0.46
CNOT9-208ENST00000542068 TM4SF20Q53R12 229 aa12.16□□□□□ -0.46
CNOT9-208ENST00000542068 RAB37Q96AX2 223 aa12.16□□□□□ -0.46
CNOT9-208ENST00000542068 KLF12Q9Y4X4 402 aa12.16□□□□□ -0.46
CNOT9-208ENST00000542068 A0A1B0GUT8 65 aa12.15□□□□□ -0.46
CNOT9-208ENST00000542068 SMKR1H3BMG3 65 aa12.15□□□□□ -0.46
CNOT9-208ENST00000542068 FCGR2BP31994 310 aaPredicted RBP12.15□□□□□ -0.46
CNOT9-208ENST00000542068 IFI27P40305 119 aaPredicted RBP12.15□□□□□ -0.46
CNOT9-208ENST00000542068 IGFL4Q6B9Z1 124 aa12.15□□□□□ -0.46
CNOT9-208ENST00000542068 CHCHD1Q96BP2 118 aaKnown RBP12.15□□□□□ -0.46
CNOT9-208ENST00000542068 LINC00574Q9H8X3 128 aa12.15□□□□□ -0.46
CNOT9-208ENST00000542068 RAXQ9Y2V3 346 aa12.15□□□□□ -0.46
CNOT9-208ENST00000542068 USP9YO00507 2555 aaPredicted RBP12.15□□□□□ -0.46
CNOT9-208ENST00000542068 PSG9Q00887 426 aa12.15□□□□□ -0.46
CNOT9-208ENST00000542068 C8orf49Q96NF6 230 aa12.15□□□□□ -0.46
CNOT9-208ENST00000542068 TRAV8-6A0A0B4J262 113 aa12.15□□□□□ -0.46
CNOT9-208ENST00000542068 TMEM213A2RRL7 107 aa12.15□□□□□ -0.46
CNOT9-208ENST00000542068 MC5RP33032 325 aa12.15□□□□□ -0.46
CNOT9-208ENST00000542068 TRGV9Q99603 122 aa12.15□□□□□ -0.46
CNOT9-208ENST00000542068 MRGPRG-AS1Q2M3A8 158 aa12.14□□□□□ -0.47
CNOT9-208ENST00000542068 TMEM155Q4W5P6 130 aa12.14□□□□□ -0.47
CNOT9-208ENST00000542068 HSPB8Q9UJY1 196 aa12.14□□□□□ -0.47
CNOT9-208ENST00000542068 GPR183P32249 361 aa12.14□□□□□ -0.47
CNOT9-208ENST00000542068 FAM162BQ5T6X4 162 aa12.14□□□□□ -0.47
CNOT9-208ENST00000542068 PRSS57Q6UWY2 283 aa12.14□□□□□ -0.47
CNOT9-208ENST00000542068 PPP1R27Q86WC6 154 aa12.14□□□□□ -0.47
CNOT9-208ENST00000542068 SIGLEC9Q9Y336 463 aa12.14□□□□□ -0.47
CNOT9-208ENST00000542068 MYO18BQ8IUG5 2567 aa12.13□□□□□ -0.47
CNOT9-208ENST00000542068 TIMM23O14925 209 aa12.13□□□□□ -0.47
CNOT9-208ENST00000542068 IL4P05112 153 aa12.13□□□□□ -0.47
CNOT9-208ENST00000542068 BPIFA4PQ86YQ2 179 aa12.13□□□□□ -0.47
CNOT9-208ENST00000542068 NEU4Q8WWR8 484 aaPredicted RBP12.13□□□□□ -0.47
CNOT9-208ENST00000542068 SCRT2Q9NQ03 307 aa12.13□□□□□ -0.47
CNOT9-208ENST00000542068 F11RQ9Y624 299 aaKnown RBP12.13□□□□□ -0.47
CNOT9-208ENST00000542068 IGHV1-3A0A0C4DH29 117 aa12.13□□□□□ -0.47
CNOT9-208ENST00000542068 D6R8Y8 96 aa12.13□□□□□ -0.47
CNOT9-208ENST00000542068 ZNF672Q499Z4 452 aaPredicted RBP12.13□□□□□ -0.47
CNOT9-208ENST00000542068 AMN1Q8IY45 258 aa12.13□□□□□ -0.47
CNOT9-208ENST00000542068 OR4A5Q8NH83 315 aa12.13□□□□□ -0.47
CNOT9-208ENST00000542068 CST9LQ9H4G1 147 aa12.13□□□□□ -0.47
CNOT9-208ENST00000542068 NOTCH3Q9UM47 2321 aa12.13□□□□□ -0.47
CNOT9-208ENST00000542068 TRAV30A0A087WSZ9 112 aa12.12□□□□□ -0.47
CNOT9-208ENST00000542068 C12orf54Q6X4T0 127 aa12.12□□□□□ -0.47
CNOT9-208ENST00000542068 C18orf15Q96N68 181 aa12.12□□□□□ -0.47
CNOT9-208ENST00000542068 OTORQ9NRC9 128 aa12.12□□□□□ -0.47
CNOT9-208ENST00000542068 PSG8Q9UQ74 426 aa12.12□□□□□ -0.47
CNOT9-208ENST00000542068 B9A039 149 aa12.12□□□□□ -0.47
CNOT9-208ENST00000542068 IGLC1P0CG04 106 aa12.12□□□□□ -0.47
CNOT9-208ENST00000542068 LGALS7P47929 136 aa12.12□□□□□ -0.47
CNOT9-208ENST00000542068 CDSNQ15517 529 aa12.12□□□□□ -0.47
CNOT9-208ENST00000542068 IGF2-ASQ6U949 168 aa12.12□□□□□ -0.47
CNOT9-208ENST00000542068 RIGQ13278 110 aa12.12□□□□□ -0.47
CNOT9-208ENST00000542068 ANKRD39Q53RE8 183 aa12.12□□□□□ -0.47
CNOT9-208ENST00000542068 C7orf71A4D174 169 aa12.11□□□□□ -0.47
CNOT9-208ENST00000542068 POLQO75417 2590 aa12.11□□□□□ -0.47
CNOT9-208ENST00000542068 IGLV2-11P01706 119 aa12.11□□□□□ -0.47
CNOT9-208ENST00000542068 NMUP48645 174 aa12.11□□□□□ -0.47
CNOT9-208ENST00000542068 COTL1Q14019 142 aa12.11□□□□□ -0.47
CNOT9-208ENST00000542068 PET117Q6UWS5 81 aa12.11□□□□□ -0.47
CNOT9-208ENST00000542068 NDFIP1Q9BT67 221 aa12.11□□□□□ -0.47
CNOT9-208ENST00000542068 ZNF785A8K8V0 405 aa12.11□□□□□ -0.47
CNOT9-208ENST00000542068 CACNG7P62955 275 aa12.11□□□□□ -0.47
CNOT9-208ENST00000542068 C3orf36Q3SXR2 165 aa12.11□□□□□ -0.47
CNOT9-208ENST00000542068 DEFB125Q8N687 156 aa12.11□□□□□ -0.47
CNOT9-208ENST00000542068 AP1S3Q96PC3 154 aa12.11□□□□□ -0.47
CNOT9-208ENST00000542068 ZNF492Q9P255 531 aa12.11□□□□□ -0.47
CNOT9-208ENST00000542068 NDUFS7O75251 213 aa12.1□□□□□ -0.47
CNOT9-208ENST00000542068 CRYGCP07315 174 aa12.1□□□□□ -0.47
CNOT9-208ENST00000542068 Q8TAT8 98 aa12.1□□□□□ -0.47
CNOT9-208ENST00000542068 THYN1Q9P016 225 aa12.1□□□□□ -0.47
CNOT9-208ENST00000542068 BUB1B-PAK6H3BSN5 160 aa12.1□□□□□ -0.47
CNOT9-208ENST00000542068 IGKV1-17P01599 117 aa12.1□□□□□ -0.47
CNOT9-208ENST00000542068 CT45A10P0DMU9 189 aa12.1□□□□□ -0.47
CNOT9-208ENST00000542068 CSN1S1P47710 185 aa12.1□□□□□ -0.47
CNOT9-208ENST00000542068 CRIP1P50238 77 aa12.1□□□□□ -0.47
CNOT9-208ENST00000542068 TMEM30BQ3MIR4 351 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms