RNA–Protein interactions for RNA: ENST00000541899.1

LRTOMT-219, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 5

Gene LRTOMT, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-219ENST00000541899 FAM213BQ8TBF2 198 aa11.63□□□□□ -0.55
LRTOMT-219ENST00000541899 ZNF586Q9NXT0 402 aa11.63□□□□□ -0.55
LRTOMT-219ENST00000541899 CLEC5AQ9NY25 188 aa11.63□□□□□ -0.55
LRTOMT-219ENST00000541899 IGKV3-7A0A075B6H7 116 aa11.62□□□□□ -0.55
LRTOMT-219ENST00000541899 TRBV19A0A075B6N1 114 aa11.62□□□□□ -0.55
LRTOMT-219ENST00000541899 TRAV1-1A0A0B4J248 108 aa11.62□□□□□ -0.55
LRTOMT-219ENST00000541899 ISLRO14498 428 aa11.62□□□□□ -0.55
LRTOMT-219ENST00000541899 IFNA7P01567 189 aa11.62□□□□□ -0.55
LRTOMT-219ENST00000541899 H2AFB1P0C5Y9 115 aa11.62□□□□□ -0.55
LRTOMT-219ENST00000541899 ARL14EPLP0DKL9 152 aa11.62□□□□□ -0.55
LRTOMT-219ENST00000541899 ZNF680Q8NEM1 530 aa11.62□□□□□ -0.55
LRTOMT-219ENST00000541899 LRRC20Q8TCA0 184 aa11.62□□□□□ -0.55
LRTOMT-219ENST00000541899 SLC50A1Q9BRV3 221 aa11.62□□□□□ -0.55
LRTOMT-219ENST00000541899 MAP1LC3B2A6NCE7 125 aa11.61□□□□□ -0.55
LRTOMT-219ENST00000541899 HMGB3O15347 200 aaKnown RBP11.61□□□□□ -0.55
LRTOMT-219ENST00000541899 GCHFRP30047 84 aa11.61□□□□□ -0.55
LRTOMT-219ENST00000541899 ID1P41134 155 aa11.61□□□□□ -0.55
LRTOMT-219ENST00000541899 PSMB3P49720 205 aa11.61□□□□□ -0.55
LRTOMT-219ENST00000541899 KRTAP10-11P60412 298 aa11.61□□□□□ -0.55
LRTOMT-219ENST00000541899 UBE2L3P68036 154 aaKnown RBP11.61□□□□□ -0.55
LRTOMT-219ENST00000541899 BLOC1S1P78537 153 aa11.61□□□□□ -0.55
LRTOMT-219ENST00000541899 FAM74A1Q5RGS3 127 aa11.61□□□□□ -0.55
LRTOMT-219ENST00000541899 LYPD1Q8N2G4 141 aa11.61□□□□□ -0.55
LRTOMT-219ENST00000541899 MAP1LC3BQ9GZQ8 125 aa11.61□□□□□ -0.55
LRTOMT-219ENST00000541899 ZNF331Q9NQX6 463 aaPredicted RBP11.61□□□□□ -0.55
LRTOMT-219ENST00000541899 TMEM167BQ9NRX6 74 aa11.61□□□□□ -0.55
LRTOMT-219ENST00000541899 NOTCH3Q9UM47 2321 aa11.6□□□□□ -0.55
LRTOMT-219ENST00000541899 EIF3GO75821 320 aaKnown RBP eCLIP11.6□□□□□ -0.55
LRTOMT-219ENST00000541899 NDUFB4O95168 129 aa11.6□□□□□ -0.55
LRTOMT-219ENST00000541899 OR10J4P0C629 311 aa11.6□□□□□ -0.55
LRTOMT-219ENST00000541899 TFPI2P48307 235 aa11.6□□□□□ -0.55
LRTOMT-219ENST00000541899 SNRPD3P62318 126 aaKnown RBP11.6□□□□□ -0.55
LRTOMT-219ENST00000541899 PSG9Q00887 426 aa11.6□□□□□ -0.55
LRTOMT-219ENST00000541899 WFDC3Q8IUB2 231 aa11.6□□□□□ -0.55
LRTOMT-219ENST00000541899 SFT2D1Q8WV19 159 aa11.6□□□□□ -0.55
LRTOMT-219ENST00000541899 C16orf92Q96LL3 132 aa11.6□□□□□ -0.55
LRTOMT-219ENST00000541899 SORL1Q92673 2214 aa11.59□□□□□ -0.55
LRTOMT-219ENST00000541899 TRAV8-2A0A0B4J237 113 aa11.59□□□□□ -0.55
LRTOMT-219ENST00000541899 ZNF705EA8MWA4 302 aaPredicted RBP11.59□□□□□ -0.55
LRTOMT-219ENST00000541899 TEX46H3BTG2 121 aa11.59□□□□□ -0.55
LRTOMT-219ENST00000541899 HBE1P02100 147 aa11.59□□□□□ -0.55
LRTOMT-219ENST00000541899 GTSCR1Q86UQ5 136 aa11.59□□□□□ -0.55
LRTOMT-219ENST00000541899 LYPD6BQ8NI32 183 aa11.59□□□□□ -0.55
LRTOMT-219ENST00000541899 C19orf73Q9NVV2 129 aa11.59□□□□□ -0.55
LRTOMT-219ENST00000541899 UBQLN2Q9UHD9 624 aa11.59□□□□□ -0.55
LRTOMT-219ENST00000541899 FGF8P55075 233 aaPredicted RBP11.58□□□□□ -0.56
LRTOMT-219ENST00000541899 PMS2P11Q13670 270 aa11.58□□□□□ -0.56
LRTOMT-219ENST00000541899 FAM24BQ8N5W8 94 aa11.58□□□□□ -0.56
LRTOMT-219ENST00000541899 BLNKQ8WV28 456 aa11.58□□□□□ -0.56
LRTOMT-219ENST00000541899 MRPL53Q96EL3 112 aaKnown RBP11.58□□□□□ -0.56
LRTOMT-219ENST00000541899 PRELID1Q9Y255 219 aa11.58□□□□□ -0.56
LRTOMT-219ENST00000541899 ARL2-SNX15V9GYD0 113 aa11.58□□□□□ -0.56
LRTOMT-219ENST00000541899 DNAH3Q8TD57 4116 aa11.58□□□□□ -0.56
LRTOMT-219ENST00000541899 SLC17A3O00476 420 aa11.57□□□□□ -0.56
LRTOMT-219ENST00000541899 SNRPCP09234 159 aaKnown RBP11.57□□□□□ -0.56
LRTOMT-219ENST00000541899 CD7P09564 240 aa11.57□□□□□ -0.56
LRTOMT-219ENST00000541899 PPT1P50897 306 aa11.57□□□□□ -0.56
LRTOMT-219ENST00000541899 CD81P60033 236 aa11.57□□□□□ -0.56
LRTOMT-219ENST00000541899 PSG3Q16557 428 aa11.57□□□□□ -0.56
LRTOMT-219ENST00000541899 ODF3L2Q3SX64 289 aa11.57□□□□□ -0.56
LRTOMT-219ENST00000541899 Q8N1Y9 231 aa11.57□□□□□ -0.56
LRTOMT-219ENST00000541899 ARL6IP6Q8N6S5 226 aa11.57□□□□□ -0.56
LRTOMT-219ENST00000541899 MAP6D1Q9H9H5 199 aa11.57□□□□□ -0.56
LRTOMT-219ENST00000541899 A0A1W2PRE2 83 aa11.56□□□□□ -0.56
LRTOMT-219ENST00000541899 OR11H12B2RN74 326 aa11.56□□□□□ -0.56
LRTOMT-219ENST00000541899 H3BTX0 84 aa11.56□□□□□ -0.56
LRTOMT-219ENST00000541899 ZNF688P0C7X2 276 aa11.56□□□□□ -0.56
LRTOMT-219ENST00000541899 IFITM2Q01629 132 aa11.56□□□□□ -0.56
LRTOMT-219ENST00000541899 ZNF767PQ75MW2 155 aa11.56□□□□□ -0.56
LRTOMT-219ENST00000541899 NKX6-2Q9C056 277 aaPredicted RBP11.56□□□□□ -0.56
LRTOMT-219ENST00000541899 TMPRSS5Q9H3S3 457 aa11.56□□□□□ -0.56
LRTOMT-219ENST00000541899 AAMDCQ9H7C9 122 aa11.56□□□□□ -0.56
LRTOMT-219ENST00000541899 DEFB131AP59861 70 aa11.55□□□□□ -0.56
LRTOMT-219ENST00000541899 RANP62826 216 aaKnown RBP11.55□□□□□ -0.56
LRTOMT-219ENST00000541899 PSMG4Q5JS54 123 aa11.55□□□□□ -0.56
LRTOMT-219ENST00000541899 C20orf173Q96LM9 149 aa11.55□□□□□ -0.56
LRTOMT-219ENST00000541899 PRR25Q96S07 402 aa11.55□□□□□ -0.56
LRTOMT-219ENST00000541899 Q9H3A6 140 aa11.55□□□□□ -0.56
LRTOMT-219ENST00000541899 OTORQ9NRC9 128 aa11.55□□□□□ -0.56
LRTOMT-219ENST00000541899 MGAM2Q2M2H8 2515 aa11.54□□□□□ -0.56
LRTOMT-219ENST00000541899 IQCF2Q8IXL9 164 aa11.54□□□□□ -0.56
LRTOMT-219ENST00000541899 LINC00052Q96N35 136 aa11.54□□□□□ -0.56
LRTOMT-219ENST00000541899 PGPA6NDG6 321 aa11.53□□□□□ -0.56
LRTOMT-219ENST00000541899 FAM74A7A6NL05 159 aa11.53□□□□□ -0.56
LRTOMT-219ENST00000541899 A8MZ25 164 aa11.53□□□□□ -0.56
LRTOMT-219ENST00000541899 CCL20P78556 96 aa11.53□□□□□ -0.56
LRTOMT-219ENST00000541899 ICAM4Q14773 271 aa11.53□□□□□ -0.56
LRTOMT-219ENST00000541899 IGFL4Q6B9Z1 124 aa11.53□□□□□ -0.56
LRTOMT-219ENST00000541899 EXOC3-AS1Q8N2X6 119 aa11.53□□□□□ -0.56
LRTOMT-219ENST00000541899 RNF182Q8N6D2 247 aa11.53□□□□□ -0.56
LRTOMT-219ENST00000541899 RXFP4Q8TDU9 374 aa11.53□□□□□ -0.56
LRTOMT-219ENST00000541899 MANBALQ9NQG1 85 aa11.53□□□□□ -0.56
LRTOMT-219ENST00000541899 HLA-DMBP28068 263 aa11.52□□□□□ -0.57
LRTOMT-219ENST00000541899 TAGLN2P37802 199 aaKnown RBP11.52□□□□□ -0.57
LRTOMT-219ENST00000541899 FOXI2Q6ZQN5 318 aa11.52□□□□□ -0.57
LRTOMT-219ENST00000541899 SAV1Q9H4B6 383 aaPredicted RBP11.52□□□□□ -0.57
LRTOMT-219ENST00000541899 AURKAIP1Q9NWT8 199 aaPredicted RBP11.52□□□□□ -0.57
LRTOMT-219ENST00000541899 YTHDF2Q9Y5A9 579 aaKnown RBP11.52□□□□□ -0.57
LRTOMT-219ENST00000541899 NBEAL1Q6ZS30 2694 aa11.51□□□□□ -0.57
LRTOMT-219ENST00000541899 A0A1B0GV50 99 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms