RNA–Protein interactions for RNA: ENST00000541795.1

RAB6A-208, Transcript of RAB6A, member RAS oncogene family, human

TSL 2

Gene RAB6A, Length 1,812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB6A-208	ENST00000541795	EPDR1	Q9UM22	224 aa		13.5	□□□□□ -0.25
RAB6A-208	ENST00000541795	FN1	P02751	2386 aa	Known RBP	13.5	□□□□□ -0.25
RAB6A-208	ENST00000541795		A0A087X0K7	114 aa		13.5	□□□□□ -0.25
RAB6A-208	ENST00000541795	HELT	A6NFD8	242 aa		13.5	□□□□□ -0.25
RAB6A-208	ENST00000541795	ADIRF	Q15847	76 aa		13.5	□□□□□ -0.25
RAB6A-208	ENST00000541795	TM4SF20	Q53R12	229 aa		13.5	□□□□□ -0.25
RAB6A-208	ENST00000541795	C16orf54	Q6UWD8	224 aa		13.5	□□□□□ -0.25
RAB6A-208	ENST00000541795	RPH3AL	Q9UNE2	315 aa		13.5	□□□□□ -0.25
RAB6A-208	ENST00000541795	TRBV20OR9-2	A0A075B6H5	130 aa		13.49	□□□□□ -0.25
RAB6A-208	ENST00000541795	ZNF785	A8K8V0	405 aa		13.49	□□□□□ -0.25
RAB6A-208	ENST00000541795	RPL23	P62829	140 aa	Known RBP	13.49	□□□□□ -0.25
RAB6A-208	ENST00000541795	CMTM2	Q8TAZ6	248 aa		13.49	□□□□□ -0.25
RAB6A-208	ENST00000541795	GLMP	Q8WWB7	406 aa		13.49	□□□□□ -0.25
RAB6A-208	ENST00000541795	UFC1	Q9Y3C8	167 aa		13.49	□□□□□ -0.25
RAB6A-208	ENST00000541795	IGHV7-4-1	A0A0J9YVY3	117 aa		13.48	□□□□□ -0.25
RAB6A-208	ENST00000541795		A0A1W2PS18	150 aa		13.48	□□□□□ -0.25
RAB6A-208	ENST00000541795		K7EMT4	169 aa		13.48	□□□□□ -0.25
RAB6A-208	ENST00000541795	HOXD3	P31249	432 aa	Predicted RBP	13.48	□□□□□ -0.25
RAB6A-208	ENST00000541795	CNN1	P51911	297 aa	Known RBP	13.48	□□□□□ -0.25
RAB6A-208	ENST00000541795	PSG9	Q00887	426 aa		13.48	□□□□□ -0.25
RAB6A-208	ENST00000541795	KLHL30-AS1	Q8NEE0	82 aa		13.48	□□□□□ -0.25
RAB6A-208	ENST00000541795	GRAMD2B	Q96HH9	432 aa		13.48	□□□□□ -0.25
RAB6A-208	ENST00000541795	ATG101	Q9BSB4	218 aa		13.48	□□□□□ -0.25
RAB6A-208	ENST00000541795	AAMDC	Q9H7C9	122 aa		13.48	□□□□□ -0.25
RAB6A-208	ENST00000541795		B4DEV8	164 aa		13.48	□□□□□ -0.25
RAB6A-208	ENST00000541795		C9JCJ5	164 aa		13.48	□□□□□ -0.25
RAB6A-208	ENST00000541795	ZNF253	O75346	499 aa		13.48	□□□□□ -0.25
RAB6A-208	ENST00000541795	DEFB136	Q30KP8	78 aa		13.48	□□□□□ -0.25
RAB6A-208	ENST00000541795	TMEM88	Q6PEY1	159 aa		13.48	□□□□□ -0.25
RAB6A-208	ENST00000541795	PGPEP1L	A6NFU8	196 aa		13.47	□□□□□ -0.25
RAB6A-208	ENST00000541795	HAX1	O00165	279 aa		13.47	□□□□□ -0.25
RAB6A-208	ENST00000541795	TCRA	P04437	139 aa		13.47	□□□□□ -0.25
RAB6A-208	ENST00000541795	CD28	P10747	220 aa		13.47	□□□□□ -0.25
RAB6A-208	ENST00000541795	CENPW	Q5EE01	88 aa		13.47	□□□□□ -0.25
RAB6A-208	ENST00000541795	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		13.47	□□□□□ -0.25
RAB6A-208	ENST00000541795	REC114	Q7Z4M0	266 aa		13.47	□□□□□ -0.25
RAB6A-208	ENST00000541795	LINC01551	Q86U37	167 aa		13.47	□□□□□ -0.25
RAB6A-208	ENST00000541795	WFDC12	Q8WWY7	111 aa		13.47	□□□□□ -0.25
RAB6A-208	ENST00000541795	LINC00479	Q96M42	142 aa		13.47	□□□□□ -0.25
RAB6A-208	ENST00000541795	RNF114	Q9Y508	228 aa		13.47	□□□□□ -0.25
RAB6A-208	ENST00000541795	GNG4	P50150	75 aa		13.46	□□□□□ -0.25
RAB6A-208	ENST00000541795	SYNJ2BP	P57105	145 aa		13.46	□□□□□ -0.25
RAB6A-208	ENST00000541795	HIST2H2BD	Q6DRA6	164 aa		13.46	□□□□□ -0.25
RAB6A-208	ENST00000541795	CBLN2	Q8IUK8	224 aa		13.46	□□□□□ -0.25
RAB6A-208	ENST00000541795	C11orf44	Q8N8P7	122 aa		13.46	□□□□□ -0.25
RAB6A-208	ENST00000541795	RHPN1-AS1	Q9BWJ2	59 aa		13.46	□□□□□ -0.25
RAB6A-208	ENST00000541795	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	13.46	□□□□□ -0.25
RAB6A-208	ENST00000541795	F8	P00451	2351 aa		13.46	□□□□□ -0.25
RAB6A-208	ENST00000541795	TRAV34	A0A0B4J273	112 aa		13.46	□□□□□ -0.26
RAB6A-208	ENST00000541795	CYSRT1	A8MQ03	144 aa		13.46	□□□□□ -0.26
RAB6A-208	ENST00000541795	LINC01619	G3V211	115 aa		13.46	□□□□□ -0.26
RAB6A-208	ENST00000541795	DNASE2	O00115	360 aa	Predicted RBP	13.46	□□□□□ -0.26
RAB6A-208	ENST00000541795	LGALS9	O00182	355 aa		13.46	□□□□□ -0.26
RAB6A-208	ENST00000541795	MEOX2	P50222	304 aa		13.46	□□□□□ -0.26
RAB6A-208	ENST00000541795	TAS2R60	P59551	318 aa		13.46	□□□□□ -0.26
RAB6A-208	ENST00000541795	SRSF2	Q01130	221 aa	Known RBP	13.46	□□□□□ -0.26
RAB6A-208	ENST00000541795	C1QL4	Q86Z23	238 aa		13.46	□□□□□ -0.26
RAB6A-208	ENST00000541795	ZNF331	Q9NQX6	463 aa	Predicted RBP	13.46	□□□□□ -0.26
RAB6A-208	ENST00000541795	SMPX	Q9UHP9	88 aa		13.46	□□□□□ -0.26
RAB6A-208	ENST00000541795	SETX	Q7Z333	2677 aa	Known RBP	13.45	□□□□□ -0.26
RAB6A-208	ENST00000541795		A0A087WWC5	75 aa		13.45	□□□□□ -0.26
RAB6A-208	ENST00000541795	TMEM213	A2RRL7	107 aa		13.45	□□□□□ -0.26
RAB6A-208	ENST00000541795		A8MWP6	167 aa		13.45	□□□□□ -0.26
RAB6A-208	ENST00000541795	CHEK1	O14757	476 aa		13.45	□□□□□ -0.26
RAB6A-208	ENST00000541795	OR11H1	Q8NG94	326 aa		13.45	□□□□□ -0.26
RAB6A-208	ENST00000541795	OCC1	Q8TAD7	63 aa		13.45	□□□□□ -0.26
RAB6A-208	ENST00000541795	DPF1	Q92782	380 aa		13.45	□□□□□ -0.26
RAB6A-208	ENST00000541795	IGF2BP2-AS1	Q96M15	143 aa		13.45	□□□□□ -0.26
RAB6A-208	ENST00000541795	LY96	Q9Y6Y9	160 aa		13.45	□□□□□ -0.26
RAB6A-208	ENST00000541795		M0R3E3	92 aa		13.44	□□□□□ -0.26
RAB6A-208	ENST00000541795	ISLR	O14498	428 aa		13.44	□□□□□ -0.26
RAB6A-208	ENST00000541795	EDN2	P20800	178 aa		13.44	□□□□□ -0.26
RAB6A-208	ENST00000541795	SLURP1	P55000	103 aa		13.44	□□□□□ -0.26
RAB6A-208	ENST00000541795	UBE2G1	P62253	170 aa		13.44	□□□□□ -0.26
RAB6A-208	ENST00000541795	TMEM183B	Q1AE95	376 aa		13.44	□□□□□ -0.26
RAB6A-208	ENST00000541795	GOLT1A	Q6ZVE7	132 aa		13.44	□□□□□ -0.26
RAB6A-208	ENST00000541795	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	13.44	□□□□□ -0.26
RAB6A-208	ENST00000541795	OR1N2	Q8NGR9	330 aa		13.44	□□□□□ -0.26
RAB6A-208	ENST00000541795	SLC50A1	Q9BRV3	221 aa		13.44	□□□□□ -0.26
RAB6A-208	ENST00000541795	BMI1	P35226	326 aa		13.43	□□□□□ -0.26
RAB6A-208	ENST00000541795	PROK1	P58294	105 aa		13.43	□□□□□ -0.26
RAB6A-208	ENST00000541795	KLF5	Q13887	457 aa	Predicted RBP	13.43	□□□□□ -0.26
RAB6A-208	ENST00000541795	C8orf86	Q6ZUL3	223 aa		13.43	□□□□□ -0.26
RAB6A-208	ENST00000541795	FMC1	Q96HJ9	113 aa		13.43	□□□□□ -0.26
RAB6A-208	ENST00000541795	CITED2	Q99967	270 aa	Predicted RBP	13.43	□□□□□ -0.26
RAB6A-208	ENST00000541795	SMCO4	Q9NRQ5	59 aa		13.43	□□□□□ -0.26
RAB6A-208	ENST00000541795	KLF12	Q9Y4X4	402 aa		13.43	□□□□□ -0.26
RAB6A-208	ENST00000541795	TSPAN4	O14817	238 aa		13.43	□□□□□ -0.26
RAB6A-208	ENST00000541795	S100A9	P06702	114 aa	Known RBP	13.43	□□□□□ -0.26
RAB6A-208	ENST00000541795	CSN1S1	P47710	185 aa		13.43	□□□□□ -0.26
RAB6A-208	ENST00000541795	RNF212	Q495C1	297 aa		13.43	□□□□□ -0.26
RAB6A-208	ENST00000541795	IGFL4	Q6B9Z1	124 aa		13.43	□□□□□ -0.26
RAB6A-208	ENST00000541795	ISOC2	Q96AB3	205 aa		13.43	□□□□□ -0.26
RAB6A-208	ENST00000541795	DUX3	Q96PT4	197 aa		13.43	□□□□□ -0.26
RAB6A-208	ENST00000541795	TSSC4	Q9Y5U2	329 aa	Predicted RBP	13.43	□□□□□ -0.26
RAB6A-208	ENST00000541795		A0A1W2PRX2	142 aa		13.42	□□□□□ -0.26
RAB6A-208	ENST00000541795	DIRC3	C9JPN6	131 aa		13.42	□□□□□ -0.26
RAB6A-208	ENST00000541795	HLA-DMB	P28068	263 aa		13.42	□□□□□ -0.26
RAB6A-208	ENST00000541795	SGK494	Q96LW2	274 aa		13.42	□□□□□ -0.26
RAB6A-208	ENST00000541795	PRELID1	Q9Y255	219 aa		13.42	□□□□□ -0.26

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