RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 A0A096LNJ9 63 aa8.19□□□□□ -1.1
CDC42SE1-207ENST00000540998 D6R8Y8 96 aa8.19□□□□□ -1.1
CDC42SE1-207ENST00000540998 K7EP13 123 aa8.19□□□□□ -1.1
CDC42SE1-207ENST00000540998 RAB37Q96AX2 223 aa8.19□□□□□ -1.1
CDC42SE1-207ENST00000540998 CHRDL1Q9BU40 450 aa8.19□□□□□ -1.1
CDC42SE1-207ENST00000540998 CST9LQ9H4G1 147 aa8.19□□□□□ -1.1
CDC42SE1-207ENST00000540998 AP5S1Q9NUS5 200 aa8.19□□□□□ -1.1
CDC42SE1-207ENST00000540998 LIPFP07098 398 aa8.18□□□□□ -1.1
CDC42SE1-207ENST00000540998 OR5AL1P0C617 328 aa8.18□□□□□ -1.1
CDC42SE1-207ENST00000540998 HLA-DMBP28068 263 aa8.18□□□□□ -1.1
CDC42SE1-207ENST00000540998 ATP5IP56385 69 aaPredicted RBP8.18□□□□□ -1.1
CDC42SE1-207ENST00000540998 MEF2CQ06413 473 aaPredicted RBP8.18□□□□□ -1.1
CDC42SE1-207ENST00000540998 PRR30Q53SZ7 412 aaPredicted RBP8.18□□□□□ -1.1
CDC42SE1-207ENST00000540998 CHCHD1Q96BP2 118 aaKnown RBP8.18□□□□□ -1.1
CDC42SE1-207ENST00000540998 DYNLRB1Q9NP97 96 aa8.18□□□□□ -1.1
CDC42SE1-207ENST00000540998 INSIG2Q9Y5U4 225 aa8.18□□□□□ -1.1
CDC42SE1-207ENST00000540998 IGKV2-40A0A087WW87 121 aaPredicted RBP8.18□□□□□ -1.1
CDC42SE1-207ENST00000540998 A0A1B0GUT8 65 aa8.18□□□□□ -1.1
CDC42SE1-207ENST00000540998 IGKV2D-40P01614 121 aaPredicted RBP8.18□□□□□ -1.1
CDC42SE1-207ENST00000540998 IL4P05112 153 aa8.18□□□□□ -1.1
CDC42SE1-207ENST00000540998 FCGR2BP31994 310 aaPredicted RBP8.18□□□□□ -1.1
CDC42SE1-207ENST00000540998 TMEM155Q4W5P6 130 aa8.18□□□□□ -1.1
CDC42SE1-207ENST00000540998 PPP1R27Q86WC6 154 aa8.18□□□□□ -1.1
CDC42SE1-207ENST00000540998 DEFB125Q8N687 156 aa8.18□□□□□ -1.1
CDC42SE1-207ENST00000540998 RASL11BQ9BPW5 248 aa8.18□□□□□ -1.1
CDC42SE1-207ENST00000540998 F11RQ9Y624 299 aaKnown RBP8.18□□□□□ -1.1
CDC42SE1-207ENST00000540998 IGHV1-3A0A0C4DH29 117 aa8.18□□□□□ -1.1
CDC42SE1-207ENST00000540998 CNIH1O95406 144 aa8.18□□□□□ -1.1
CDC42SE1-207ENST00000540998 STXBP6Q8NFX7 210 aa8.18□□□□□ -1.1
CDC42SE1-207ENST00000540998 C18orf15Q96N68 181 aa8.18□□□□□ -1.1
CDC42SE1-207ENST00000540998 JMJD8Q96S16 334 aa8.18□□□□□ -1.1
CDC42SE1-207ENST00000540998 ZNF747Q9BV97 191 aa8.18□□□□□ -1.1
CDC42SE1-207ENST00000540998 GPR183P32249 361 aa8.17□□□□□ -1.1
CDC42SE1-207ENST00000540998 CACNG7P62955 275 aa8.17□□□□□ -1.1
CDC42SE1-207ENST00000540998 FA2HQ7L5A8 372 aa8.17□□□□□ -1.1
CDC42SE1-207ENST00000540998 NDFIP1Q9BT67 221 aa8.17□□□□□ -1.1
CDC42SE1-207ENST00000540998 ZNF492Q9P255 531 aa8.17□□□□□ -1.1
CDC42SE1-207ENST00000540998 PSG8Q9UQ74 426 aa8.17□□□□□ -1.1
CDC42SE1-207ENST00000540998 TRAV30A0A087WSZ9 112 aa8.17□□□□□ -1.1
CDC42SE1-207ENST00000540998 C7orf71A4D174 169 aa8.17□□□□□ -1.1
CDC42SE1-207ENST00000540998 NPIPB6E9PJ23 425 aa8.17□□□□□ -1.1
CDC42SE1-207ENST00000540998 INS-IGF2F8WCM5 200 aa8.17□□□□□ -1.1
CDC42SE1-207ENST00000540998 C16orf97H3BN30 126 aa8.17□□□□□ -1.1
CDC42SE1-207ENST00000540998 HLA-DRB1P01911 266 aa8.17□□□□□ -1.1
CDC42SE1-207ENST00000540998 RHOGP84095 191 aa8.17□□□□□ -1.1
CDC42SE1-207ENST00000540998 LYZL1Q6UWQ5 148 aa8.17□□□□□ -1.1
CDC42SE1-207ENST00000540998 OTORQ9NRC9 128 aa8.17□□□□□ -1.1
CDC42SE1-207ENST00000540998 MSRB1Q9NZV6 116 aa8.17□□□□□ -1.1
CDC42SE1-207ENST00000540998 PTPRQQ9UMZ3 2332 aa8.17□□□□□ -1.1
CDC42SE1-207ENST00000540998 I3L2K1 104 aa8.16□□□□□ -1.1
CDC42SE1-207ENST00000540998 HAX1O00165 279 aa8.16□□□□□ -1.1
CDC42SE1-207ENST00000540998 PPIFP30405 207 aaKnown RBP8.16□□□□□ -1.1
CDC42SE1-207ENST00000540998 CDKN1BP46527 198 aa8.16□□□□□ -1.1
CDC42SE1-207ENST00000540998 RIPPLY3P57055 190 aa8.16□□□□□ -1.1
CDC42SE1-207ENST00000540998 KLRD1Q13241 179 aa8.16□□□□□ -1.1
CDC42SE1-207ENST00000540998 OCIAD2Q56VL3 154 aa8.16□□□□□ -1.1
CDC42SE1-207ENST00000540998 PCP2Q8IVA1 136 aa8.16□□□□□ -1.1
CDC42SE1-207ENST00000540998 OR4A5Q8NH83 315 aa8.16□□□□□ -1.1
CDC42SE1-207ENST00000540998 RNASE6Q93091 150 aaKnown RBP8.16□□□□□ -1.1
CDC42SE1-207ENST00000540998 SIGLEC8Q9NYZ4 499 aa8.16□□□□□ -1.1
CDC42SE1-207ENST00000540998 TRBV19A0A075B6N1 114 aa8.16□□□□□ -1.1
CDC42SE1-207ENST00000540998 FAM231BA6NCW3 169 aa8.16□□□□□ -1.1
CDC42SE1-207ENST00000540998 NHLH1Q02575 133 aa8.16□□□□□ -1.1
CDC42SE1-207ENST00000540998 LINC01545Q5VT33 79 aa8.16□□□□□ -1.1
CDC42SE1-207ENST00000540998 SIGLEC15Q6ZMC9 328 aa8.16□□□□□ -1.1
CDC42SE1-207ENST00000540998 NGBQ9NPG2 151 aa8.16□□□□□ -1.1
CDC42SE1-207ENST00000540998 THYN1Q9P016 225 aa8.16□□□□□ -1.1
CDC42SE1-207ENST00000540998 E7EQL1 145 aa8.16□□□□□ -1.1
CDC42SE1-207ENST00000540998 K7EIM0 57 aa8.16□□□□□ -1.1
CDC42SE1-207ENST00000540998 RABAC1Q9UI14 185 aa8.16□□□□□ -1.1
CDC42SE1-207ENST00000540998 GAGE12BA1L429 117 aa8.15□□□□□ -1.1
CDC42SE1-207ENST00000540998 TIMM23O14925 209 aa8.15□□□□□ -1.1
CDC42SE1-207ENST00000540998 CRYGBP07316 175 aa8.15□□□□□ -1.1
CDC42SE1-207ENST00000540998 CT83Q5H943 113 aa8.15□□□□□ -1.1
CDC42SE1-207ENST00000540998 TNFRSF13BO14836 293 aaPredicted RBP8.15□□□□□ -1.11
CDC42SE1-207ENST00000540998 NMUP48645 174 aa8.15□□□□□ -1.11
CDC42SE1-207ENST00000540998 PET117Q6UWS5 81 aa8.15□□□□□ -1.11
CDC42SE1-207ENST00000540998 BPIFA4PQ86YQ2 179 aa8.15□□□□□ -1.11
CDC42SE1-207ENST00000540998 NUP37Q8NFH4 326 aa8.15□□□□□ -1.11
CDC42SE1-207ENST00000540998 ONECUT1Q9UBC0 465 aa8.15□□□□□ -1.11
CDC42SE1-207ENST00000540998 HSPB8Q9UJY1 196 aa8.15□□□□□ -1.11
CDC42SE1-207ENST00000540998 CRYBG3Q68DQ2 2970 aa8.15□□□□□ -1.11
CDC42SE1-207ENST00000540998 IGHV3OR16-13A0A075B7E8 117 aa8.14□□□□□ -1.11
CDC42SE1-207ENST00000540998 IGHV3-74A0A0B4J1X5 117 aa8.14□□□□□ -1.11
CDC42SE1-207ENST00000540998 BUB1B-PAK6H3BSN5 160 aa8.14□□□□□ -1.11
CDC42SE1-207ENST00000540998 H3BUT2 72 aa8.14□□□□□ -1.11
CDC42SE1-207ENST00000540998 MC5RP33032 325 aa8.14□□□□□ -1.11
CDC42SE1-207ENST00000540998 LGALS7P47929 136 aa8.14□□□□□ -1.11
CDC42SE1-207ENST00000540998 Q6ZS92 163 aa8.14□□□□□ -1.11
CDC42SE1-207ENST00000540998 RPEQ96AT9 228 aa8.14□□□□□ -1.11
CDC42SE1-207ENST00000540998 DKK2Q9UBU2 259 aa8.14□□□□□ -1.11
CDC42SE1-207ENST00000540998 NPIPB5A8MRT5 1133 aa8.14□□□□□ -1.11
CDC42SE1-207ENST00000540998 COX8AP10176 69 aa8.14□□□□□ -1.11
CDC42SE1-207ENST00000540998 GATA1P15976 413 aaPredicted RBP8.14□□□□□ -1.11
CDC42SE1-207ENST00000540998 EVI2AP22794 236 aa8.14□□□□□ -1.11
CDC42SE1-207ENST00000540998 ZNF80P51504 273 aaPredicted RBP8.14□□□□□ -1.11
CDC42SE1-207ENST00000540998 PIP4P1Q86T03 277 aa8.14□□□□□ -1.11
CDC42SE1-207ENST00000540998 ZNF491Q8N8L2 437 aa8.14□□□□□ -1.11
CDC42SE1-207ENST00000540998 GFRA4Q9GZZ7 299 aa8.14□□□□□ -1.11
CDC42SE1-207ENST00000540998 C1RLQ9NZP8 487 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms