RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 GATA2P23769 480 aaPredicted RBP18.6■□□□□ 0.57
CHFR-218ENST00000540963 SPANXN2Q5MJ10 180 aa18.6■□□□□ 0.57
CHFR-218ENST00000540963 RNF182Q8N6D2 247 aa18.6■□□□□ 0.57
CHFR-218ENST00000540963 RXFP4Q8TDU9 374 aa18.6■□□□□ 0.57
CHFR-218ENST00000540963 GNPNAT1Q96EK6 184 aaPredicted RBP18.6■□□□□ 0.57
CHFR-218ENST00000540963 IGFL4Q6B9Z1 124 aa18.59■□□□□ 0.57
CHFR-218ENST00000540963 OR8A1Q8NGG7 326 aa18.59■□□□□ 0.57
CHFR-218ENST00000540963 RNASE8Q8TDE3 154 aaKnown RBP18.59■□□□□ 0.57
CHFR-218ENST00000540963 TMEM263Q8WUH6 116 aaKnown RBP18.59■□□□□ 0.57
CHFR-218ENST00000540963 PAIP2BQ9ULR5 123 aaKnown RBP18.59■□□□□ 0.57
CHFR-218ENST00000540963 PMS2P5A8MQ11 134 aa18.58■□□□□ 0.56
CHFR-218ENST00000540963 EPM2AB3EWF7 344 aa18.58■□□□□ 0.56
CHFR-218ENST00000540963 H3BNG1 76 aa18.58■□□□□ 0.56
CHFR-218ENST00000540963 H3BP45 60 aa18.58■□□□□ 0.56
CHFR-218ENST00000540963 RPL7P18124 248 aaKnown RBP18.58■□□□□ 0.56
CHFR-218ENST00000540963 M6PRP20645 277 aa18.58■□□□□ 0.56
CHFR-218ENST00000540963 UBE2MP61081 183 aaKnown RBP18.58■□□□□ 0.56
CHFR-218ENST00000540963 RHOBP62745 196 aa18.58■□□□□ 0.56
CHFR-218ENST00000540963 PPP1R14DQ9NXH3 145 aa18.58■□□□□ 0.56
CHFR-218ENST00000540963 LINC00854A0A1B0GVQ3 168 aa18.57■□□□□ 0.56
CHFR-218ENST00000540963 H3BRN7 92 aa18.57■□□□□ 0.56
CHFR-218ENST00000540963 POLR2GP62487 172 aaKnown RBP eCLIP18.57■□□□□ 0.56
CHFR-218ENST00000540963 FGL1Q08830 312 aa18.57■□□□□ 0.56
CHFR-218ENST00000540963 SPANXN5Q5MJ07 72 aa18.57■□□□□ 0.56
CHFR-218ENST00000540963 LINC00612Q8N6U2 182 aa18.57■□□□□ 0.56
CHFR-218ENST00000540963 C20orf144Q9BQM9 153 aa18.57■□□□□ 0.56
CHFR-218ENST00000540963 NOP10Q9NPE3 64 aaKnown RBP18.57■□□□□ 0.56
CHFR-218ENST00000540963 CDKN1BP46527 198 aa18.56■□□□□ 0.56
CHFR-218ENST00000540963 HIST1H1AQ02539 215 aaPredicted RBP18.56■□□□□ 0.56
CHFR-218ENST00000540963 SHANK2-AS3Q9BTD1 123 aa18.56■□□□□ 0.56
CHFR-218ENST00000540963 TRAV26-1A0A087WT03 109 aa18.55■□□□□ 0.56
CHFR-218ENST00000540963 A0A087X0K7 114 aa18.55■□□□□ 0.56
CHFR-218ENST00000540963 NAP1L6A6NFF2 107 aa18.55■□□□□ 0.56
CHFR-218ENST00000540963 H7BYZ3 331 aa18.55■□□□□ 0.56
CHFR-218ENST00000540963 CCNKO75909 580 aa18.55■□□□□ 0.56
CHFR-218ENST00000540963 OR4E1P0C645 316 aa18.55■□□□□ 0.56
CHFR-218ENST00000540963 HTN1P15515 57 aa18.55■□□□□ 0.56
CHFR-218ENST00000540963 CXCL3P19876 107 aa18.55■□□□□ 0.56
CHFR-218ENST00000540963 ANXA7P20073 488 aaKnown RBP18.55■□□□□ 0.56
CHFR-218ENST00000540963 OR5I1Q13606 314 aa18.55■□□□□ 0.56
CHFR-218ENST00000540963 MRPS16Q9Y3D3 137 aaKnown RBP18.55■□□□□ 0.56
CHFR-218ENST00000540963 RAP2BP61225 183 aa18.54■□□□□ 0.56
CHFR-218ENST00000540963 PSG3Q16557 428 aa18.54■□□□□ 0.56
CHFR-218ENST00000540963 ACOT7LQ6ZUV0 252 aa18.54■□□□□ 0.56
CHFR-218ENST00000540963 DMBT1Q9UGM3 2413 aaPredicted RBP18.54■□□□□ 0.56
CHFR-218ENST00000540963 PLA2G10O15496 165 aa18.53■□□□□ 0.56
CHFR-218ENST00000540963 IL7P13232 177 aa18.53■□□□□ 0.56
CHFR-218ENST00000540963 AKR1C1Q04828 323 aa18.53■□□□□ 0.56
CHFR-218ENST00000540963 ESRGQ1W209 222 aa18.53■□□□□ 0.56
CHFR-218ENST00000540963 S100A7AQ86SG5 101 aa18.53■□□□□ 0.56
CHFR-218ENST00000540963 HIGD1AQ9Y241 93 aa18.53■□□□□ 0.56
CHFR-218ENST00000540963 PLP1P60201 277 aa18.52■□□□□ 0.56
CHFR-218ENST00000540963 TRIQKQ629K1 86 aa18.52■□□□□ 0.56
CHFR-218ENST00000540963 UHRF2Q96PU4 802 aa18.52■□□□□ 0.56
CHFR-218ENST00000540963 RNF24Q9Y225 148 aa18.52■□□□□ 0.56
CHFR-218ENST00000540963 STRAPQ9Y3F4 350 aaKnown RBP18.52■□□□□ 0.56
CHFR-218ENST00000540963 PGPEP1Q9NXJ5 209 aa18.51■□□□□ 0.55
CHFR-218ENST00000540963 HYPMO75409 117 aa18.5■□□□□ 0.55
CHFR-218ENST00000540963 CYP2G1PQ6ZSU1 146 aa18.5■□□□□ 0.55
CHFR-218ENST00000540963 ZNF586Q9NXT0 402 aa18.5■□□□□ 0.55
CHFR-218ENST00000540963 PSENENQ9NZ42 101 aa18.5■□□□□ 0.55
CHFR-218ENST00000540963 IL5P05113 134 aa18.49■□□□□ 0.55
CHFR-218ENST00000540963 SELENOTP62341 195 aa18.49■□□□□ 0.55
CHFR-218ENST00000540963 TMEM14EPQ6UXP3 125 aa18.49■□□□□ 0.55
CHFR-218ENST00000540963 CCDC28AQ8IWP9 274 aa18.49■□□□□ 0.55
CHFR-218ENST00000540963 LRRC20Q8TCA0 184 aa18.49■□□□□ 0.55
CHFR-218ENST00000540963 RPUSD4Q96CM3 377 aaKnown RBP18.49■□□□□ 0.55
CHFR-218ENST00000540963 SMIM8Q96KF7 97 aa18.49■□□□□ 0.55
CHFR-218ENST00000540963 PTTG2Q9NZH5 202 aa18.49■□□□□ 0.55
CHFR-218ENST00000540963 SSSCA1O60232 199 aa18.48■□□□□ 0.55
CHFR-218ENST00000540963 CXCL2P19875 107 aa18.48■□□□□ 0.55
CHFR-218ENST00000540963 HOXA5P20719 270 aa18.48■□□□□ 0.55
CHFR-218ENST00000540963 INPP1P49441 399 aa18.48■□□□□ 0.55
CHFR-218ENST00000540963 A0A0J9YY99 117 aa18.47■□□□□ 0.55
CHFR-218ENST00000540963 RLN2P04090 185 aa18.47■□□□□ 0.55
CHFR-218ENST00000540963 INAFM2P0DMQ5 153 aa18.47■□□□□ 0.55
CHFR-218ENST00000540963 ARL16Q0P5N6 197 aa18.47■□□□□ 0.55
CHFR-218ENST00000540963 CDPF1Q6NVV7 123 aa18.47■□□□□ 0.55
CHFR-218ENST00000540963 Q6ZRN7 208 aaPredicted RBP18.47■□□□□ 0.55
CHFR-218ENST00000540963 MITD1Q8WV92 249 aa18.47■□□□□ 0.55
CHFR-218ENST00000540963 C4orf46Q504U0 113 aa18.46■□□□□ 0.55
CHFR-218ENST00000540963 LYPD1Q8N2G4 141 aa18.46■□□□□ 0.55
CHFR-218ENST00000540963 RCL1Q9Y2P8 373 aaKnown RBP18.46■□□□□ 0.55
CHFR-218ENST00000540963 OR5G3P0C626 314 aa18.45■□□□□ 0.54
CHFR-218ENST00000540963 LINC00869P0C866 280 aa18.45■□□□□ 0.54
CHFR-218ENST00000540963 LINC00315P59091 139 aa18.45■□□□□ 0.54
CHFR-218ENST00000540963 DLK1P80370 383 aa18.45■□□□□ 0.54
CHFR-218ENST00000540963 PATE2Q6UY27 113 aa18.45■□□□□ 0.54
CHFR-218ENST00000540963 ZBTB8BQ8NAP8 495 aaPredicted RBP18.45■□□□□ 0.54
CHFR-218ENST00000540963 GAGE12BA1L429 117 aa18.44■□□□□ 0.54
CHFR-218ENST00000540963 SNURFLB1AK76 121 aa18.44■□□□□ 0.54
CHFR-218ENST00000540963 EREGO14944 169 aa18.44■□□□□ 0.54
CHFR-218ENST00000540963 GAGE7O76087 117 aa18.44■□□□□ 0.54
CHFR-218ENST00000540963 METTL15P1P0C7V9 234 aa18.44■□□□□ 0.54
CHFR-218ENST00000540963 GAGE12FP0CL80 117 aa18.44■□□□□ 0.54
CHFR-218ENST00000540963 GAGE12GP0CL81 117 aa18.44■□□□□ 0.54
CHFR-218ENST00000540963 GAGE12IP0CL82 117 aa18.44■□□□□ 0.54
CHFR-218ENST00000540963 RRAS2P62070 204 aaPredicted RBP18.44■□□□□ 0.54
CHFR-218ENST00000540963 IAH1Q2TAA2 248 aaPredicted RBP18.44■□□□□ 0.54
CHFR-218ENST00000540963 LCN15Q6UWW0 184 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms