RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 CDC42EP3Q9UKI2 254 aa9.4□□□□□ -0.9
AP003559.1-201ENST00000540906 SELENOKQ9Y6D0 94 aa9.4□□□□□ -0.9
AP003559.1-201ENST00000540906 GALR1P47211 349 aa9.4□□□□□ -0.91
AP003559.1-201ENST00000540906 RELQ04864 619 aaPredicted RBP9.4□□□□□ -0.91
AP003559.1-201ENST00000540906 TMEM183BQ1AE95 376 aa9.4□□□□□ -0.91
AP003559.1-201ENST00000540906 GOLT1AQ6ZVE7 132 aa9.4□□□□□ -0.91
AP003559.1-201ENST00000540906 ATP6V0BQ99437 205 aa9.4□□□□□ -0.91
AP003559.1-201ENST00000540906 ATG101Q9BSB4 218 aa9.4□□□□□ -0.91
AP003559.1-201ENST00000540906 KLF12Q9Y4X4 402 aa9.4□□□□□ -0.91
AP003559.1-201ENST00000540906 LY96Q9Y6Y9 160 aa9.4□□□□□ -0.91
AP003559.1-201ENST00000540906 GCGP01275 180 aa9.39□□□□□ -0.91
AP003559.1-201ENST00000540906 MGST1P10620 155 aaKnown RBP9.39□□□□□ -0.91
AP003559.1-201ENST00000540906 FOLR2P14207 255 aa9.39□□□□□ -0.91
AP003559.1-201ENST00000540906 TAS2R60P59551 318 aa9.39□□□□□ -0.91
AP003559.1-201ENST00000540906 C18orf65Q6ZTR6 163 aa9.39□□□□□ -0.91
AP003559.1-201ENST00000540906 Q8N2B8 174 aa9.39□□□□□ -0.91
AP003559.1-201ENST00000540906 ANAPC16Q96DE5 110 aa9.39□□□□□ -0.91
AP003559.1-201ENST00000540906 FAM181BA6NEQ2 426 aa9.38□□□□□ -0.91
AP003559.1-201ENST00000540906 RPL7P18124 248 aaKnown RBP9.38□□□□□ -0.91
AP003559.1-201ENST00000540906 FAM3BP58499 235 aaPredicted RBP9.38□□□□□ -0.91
AP003559.1-201ENST00000540906 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.38□□□□□ -0.91
AP003559.1-201ENST00000540906 LINC00322Q6ZN03 302 aaPredicted RBP9.38□□□□□ -0.91
AP003559.1-201ENST00000540906 BAGE2Q86Y30 109 aa9.38□□□□□ -0.91
AP003559.1-201ENST00000540906 OR10G8Q8NGN5 311 aa9.38□□□□□ -0.91
AP003559.1-201ENST00000540906 MYOZ3Q8TDC0 251 aa9.38□□□□□ -0.91
AP003559.1-201ENST00000540906 V9GYV3 84 aa9.38□□□□□ -0.91
AP003559.1-201ENST00000540906 A0A0G2JLM5 398 aa9.38□□□□□ -0.91
AP003559.1-201ENST00000540906 ZNF785A8K8V0 405 aa9.38□□□□□ -0.91
AP003559.1-201ENST00000540906 NDUFA4O00483 81 aa9.38□□□□□ -0.91
AP003559.1-201ENST00000540906 CD99P14209 185 aa9.38□□□□□ -0.91
AP003559.1-201ENST00000540906 Q6ZSV7 163 aa9.38□□□□□ -0.91
AP003559.1-201ENST00000540906 TMEM190Q8WZ59 177 aa9.38□□□□□ -0.91
AP003559.1-201ENST00000540906 METTL26Q96S19 204 aa9.38□□□□□ -0.91
AP003559.1-201ENST00000540906 TCEAL7Q9BRU2 100 aa9.38□□□□□ -0.91
AP003559.1-201ENST00000540906 ZNF320A2RRD8 509 aa9.37□□□□□ -0.91
AP003559.1-201ENST00000540906 ZNF705FA8MVS1 300 aaPredicted RBP9.37□□□□□ -0.91
AP003559.1-201ENST00000540906 DIRC3C9JPN6 131 aa9.37□□□□□ -0.91
AP003559.1-201ENST00000540906 LY6G6DO95868 133 aa9.37□□□□□ -0.91
AP003559.1-201ENST00000540906 TM4SF20Q53R12 229 aa9.37□□□□□ -0.91
AP003559.1-201ENST00000540906 Q86TA4 180 aa9.37□□□□□ -0.91
AP003559.1-201ENST00000540906 GLMPQ8WWB7 406 aa9.37□□□□□ -0.91
AP003559.1-201ENST00000540906 FAM210BQ96KR6 192 aa9.37□□□□□ -0.91
AP003559.1-201ENST00000540906 PYGO2Q9BRQ0 406 aa9.37□□□□□ -0.91
AP003559.1-201ENST00000540906 MLST8Q9BVC4 326 aa9.37□□□□□ -0.91
AP003559.1-201ENST00000540906 PEF1Q9UBV8 284 aaKnown RBP9.37□□□□□ -0.91
AP003559.1-201ENST00000540906 HIVEP1P15822 2718 aa9.37□□□□□ -0.91
AP003559.1-201ENST00000540906 MTORP42345 2549 aa9.36□□□□□ -0.91
AP003559.1-201ENST00000540906 IGKV2-40A0A087WW87 121 aaPredicted RBP9.36□□□□□ -0.91
AP003559.1-201ENST00000540906 TRAV8-2A0A0B4J237 113 aa9.36□□□□□ -0.91
AP003559.1-201ENST00000540906 PRAC2D3DTV9 90 aa9.36□□□□□ -0.91
AP003559.1-201ENST00000540906 CA1P00915 261 aaPredicted RBP9.36□□□□□ -0.91
AP003559.1-201ENST00000540906 LTAP01374 205 aa9.36□□□□□ -0.91
AP003559.1-201ENST00000540906 IGKV2D-40P01614 121 aaPredicted RBP9.36□□□□□ -0.91
AP003559.1-201ENST00000540906 RPS10P46783 165 aaKnown RBP9.36□□□□□ -0.91
AP003559.1-201ENST00000540906 UBE2G1P62253 170 aa9.36□□□□□ -0.91
AP003559.1-201ENST00000540906 FOXE3Q13461 319 aa9.36□□□□□ -0.91
AP003559.1-201ENST00000540906 PDE6HQ13956 83 aa9.36□□□□□ -0.91
AP003559.1-201ENST00000540906 TCTEX1D4Q5JR98 221 aa9.36□□□□□ -0.91
AP003559.1-201ENST00000540906 C16orf54Q6UWD8 224 aa9.36□□□□□ -0.91
AP003559.1-201ENST00000540906 LYPD1Q8N2G4 141 aa9.36□□□□□ -0.91
AP003559.1-201ENST00000540906 TMEM86BQ8N661 226 aa9.36□□□□□ -0.91
AP003559.1-201ENST00000540906 RNF182Q8N6D2 247 aa9.36□□□□□ -0.91
AP003559.1-201ENST00000540906 CMTM2Q8TAZ6 248 aa9.36□□□□□ -0.91
AP003559.1-201ENST00000540906 ZNF331Q9NQX6 463 aaPredicted RBP9.36□□□□□ -0.91
AP003559.1-201ENST00000540906 TRBV24-1A0A075B6N3 115 aa9.35□□□□□ -0.91
AP003559.1-201ENST00000540906 A0A087X0K7 114 aa9.35□□□□□ -0.91
AP003559.1-201ENST00000540906 A0A1W2PPQ1 181 aa9.35□□□□□ -0.91
AP003559.1-201ENST00000540906 TMEM89A2RUT3 159 aa9.35□□□□□ -0.91
AP003559.1-201ENST00000540906 GGCTO75223 188 aaKnown RBP9.35□□□□□ -0.91
AP003559.1-201ENST00000540906 ERVFC1-1P60608 527 aa9.35□□□□□ -0.91
AP003559.1-201ENST00000540906 PRR27Q6MZM9 219 aa9.35□□□□□ -0.91
AP003559.1-201ENST00000540906 S100A7AQ86SG5 101 aa9.35□□□□□ -0.91
AP003559.1-201ENST00000540906 GPHB5Q86YW7 130 aa9.35□□□□□ -0.91
AP003559.1-201ENST00000540906 RNF24Q9Y225 148 aa9.35□□□□□ -0.91
AP003559.1-201ENST00000540906 FRMD6-AS1P0C7T7 363 aa9.35□□□□□ -0.91
AP003559.1-201ENST00000540906 PRNTQ86SH4 94 aa9.35□□□□□ -0.91
AP003559.1-201ENST00000540906 TEX29Q8N6K0 151 aa9.35□□□□□ -0.91
AP003559.1-201ENST00000540906 RNF152Q8N8N0 203 aa9.35□□□□□ -0.91
AP003559.1-201ENST00000540906 FMC1Q96HJ9 113 aa9.35□□□□□ -0.91
AP003559.1-201ENST00000540906 PRELID1Q9Y255 219 aa9.35□□□□□ -0.91
AP003559.1-201ENST00000540906 IGHV4OR15-8A0A075B7B6 117 aa9.34□□□□□ -0.91
AP003559.1-201ENST00000540906 A0A087WW49 117 aa9.34□□□□□ -0.91
AP003559.1-201ENST00000540906 CHEK1O14757 476 aa9.34□□□□□ -0.91
AP003559.1-201ENST00000540906 PHOX2AO14813 284 aa9.34□□□□□ -0.91
AP003559.1-201ENST00000540906 PPP1R2P9O14990 202 aa9.34□□□□□ -0.91
AP003559.1-201ENST00000540906 ELANEP08246 267 aa9.34□□□□□ -0.91
AP003559.1-201ENST00000540906 SLC35B1P78383 322 aa9.34□□□□□ -0.91
AP003559.1-201ENST00000540906 C1orf194Q5T5A4 169 aa9.34□□□□□ -0.91
AP003559.1-201ENST00000540906 GPR82Q96P67 336 aa9.34□□□□□ -0.91
AP003559.1-201ENST00000540906 OSTCQ9NRP0 149 aa9.34□□□□□ -0.91
AP003559.1-201ENST00000540906 MLXQ9UH92 298 aa9.34□□□□□ -0.91
AP003559.1-201ENST00000540906 LGALS1P09382 135 aaKnown RBP9.33□□□□□ -0.92
AP003559.1-201ENST00000540906 PSG9Q00887 426 aa9.33□□□□□ -0.92
AP003559.1-201ENST00000540906 DEFB136Q30KP8 78 aa9.33□□□□□ -0.92
AP003559.1-201ENST00000540906 FAM209BQ5JX69 171 aa9.33□□□□□ -0.92
AP003559.1-201ENST00000540906 C8orf86Q6ZUL3 223 aa9.33□□□□□ -0.92
AP003559.1-201ENST00000540906 KLHDC1Q8N7A1 406 aa9.33□□□□□ -0.92
AP003559.1-201ENST00000540906 TMEM75Q8N9X5 138 aa9.33□□□□□ -0.92
AP003559.1-201ENST00000540906 NUDT10Q8NFP7 164 aa9.33□□□□□ -0.92
AP003559.1-201ENST00000540906 NUDT11Q96G61 164 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms