RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 RAB2AP61019 212 aa11.47□□□□□ -0.57
DDB1-218ENST00000540784 CD300CQ08708 224 aa11.47□□□□□ -0.57
DDB1-218ENST00000540784 ZFP69Q49AA0 526 aa11.47□□□□□ -0.57
DDB1-218ENST00000540784 IGFL4Q6B9Z1 124 aa11.47□□□□□ -0.57
DDB1-218ENST00000540784 FAM122CQ6P4D5 195 aa11.47□□□□□ -0.57
DDB1-218ENST00000540784 SBSPONQ8IVN8 264 aa11.47□□□□□ -0.57
DDB1-218ENST00000540784 STHQ8IWL8 128 aa11.47□□□□□ -0.57
DDB1-218ENST00000540784 FAM167A-AS1Q96KT0 104 aa11.47□□□□□ -0.57
DDB1-218ENST00000540784 ZNF471Q9BX82 626 aaPredicted RBP11.47□□□□□ -0.57
DDB1-218ENST00000540784 OR51M1Q9H341 326 aa11.47□□□□□ -0.57
DDB1-218ENST00000540784 TRAV8-2A0A0B4J237 113 aa11.46□□□□□ -0.57
DDB1-218ENST00000540784 KNCNA6PVL3 124 aa11.46□□□□□ -0.57
DDB1-218ENST00000540784 H3BTX0 84 aa11.46□□□□□ -0.57
DDB1-218ENST00000540784 NHLRC4P0CG21 123 aaPredicted RBP11.46□□□□□ -0.57
DDB1-218ENST00000540784 EIF5AP63241 154 aaKnown RBP11.46□□□□□ -0.57
DDB1-218ENST00000540784 HAGHQ16775 308 aa11.46□□□□□ -0.57
DDB1-218ENST00000540784 ACTL10Q5JWF8 245 aa11.46□□□□□ -0.57
DDB1-218ENST00000540784 LCN15Q6UWW0 184 aa11.46□□□□□ -0.57
DDB1-218ENST00000540784 PAXXQ9BUH6 204 aa11.46□□□□□ -0.57
DDB1-218ENST00000540784 RPRMQ9NS64 109 aa11.46□□□□□ -0.57
DDB1-218ENST00000540784 ZNF586Q9NXT0 402 aa11.46□□□□□ -0.57
DDB1-218ENST00000540784 PYYP10082 97 aa11.45□□□□□ -0.58
DDB1-218ENST00000540784 TMEM41BQ5BJD5 291 aa11.45□□□□□ -0.58
DDB1-218ENST00000540784 RPP25LQ8N5L8 163 aaKnown RBP11.45□□□□□ -0.58
DDB1-218ENST00000540784 RNF141Q8WVD5 230 aa11.45□□□□□ -0.58
DDB1-218ENST00000540784 SAT2Q96F10 170 aaPredicted RBP11.45□□□□□ -0.58
DDB1-218ENST00000540784 C20orf173Q96LM9 149 aa11.45□□□□□ -0.58
DDB1-218ENST00000540784 SLC50A1Q9BRV3 221 aa11.45□□□□□ -0.58
DDB1-218ENST00000540784 ACTR3CQ9C0K3 210 aaPredicted RBP11.45□□□□□ -0.58
DDB1-218ENST00000540784 TRBV19A0A075B6N1 114 aa11.44□□□□□ -0.58
DDB1-218ENST00000540784 OR7C2O60412 319 aa11.44□□□□□ -0.58
DDB1-218ENST00000540784 NBEAP1P0C6P0 100 aa11.44□□□□□ -0.58
DDB1-218ENST00000540784 SPP1P10451 314 aa11.44□□□□□ -0.58
DDB1-218ENST00000540784 APOC4P55056 127 aa11.44□□□□□ -0.58
DDB1-218ENST00000540784 PSG3Q16557 428 aa11.44□□□□□ -0.58
DDB1-218ENST00000540784 KHDC3LQ587J8 217 aa11.44□□□□□ -0.58
DDB1-218ENST00000540784 AKR1C8PQ5T2L2 129 aa11.44□□□□□ -0.58
DDB1-218ENST00000540784 EBLN2Q6P2I7 272 aa11.44□□□□□ -0.58
DDB1-218ENST00000540784 RNF182Q8N6D2 247 aa11.44□□□□□ -0.58
DDB1-218ENST00000540784 BLNKQ8WV28 456 aa11.44□□□□□ -0.58
DDB1-218ENST00000540784 ZNF331Q9NQX6 463 aaPredicted RBP11.44□□□□□ -0.58
DDB1-218ENST00000540784 CLEC5AQ9NY25 188 aa11.44□□□□□ -0.58
DDB1-218ENST00000540784 KIR2DL5BA0A0G2JN68 375 aa11.43□□□□□ -0.58
DDB1-218ENST00000540784 KIR2DL5BA0A0G2JPC4 375 aa11.43□□□□□ -0.58
DDB1-218ENST00000540784 EIF3GO75821 320 aaKnown RBP eCLIP11.43□□□□□ -0.58
DDB1-218ENST00000540784 C4BPBP20851 252 aa11.43□□□□□ -0.58
DDB1-218ENST00000540784 CDC34P49427 236 aaPredicted RBP11.43□□□□□ -0.58
DDB1-218ENST00000540784 PSG9Q00887 426 aa11.43□□□□□ -0.58
DDB1-218ENST00000540784 FOXI2Q6ZQN5 318 aa11.43□□□□□ -0.58
DDB1-218ENST00000540784 BAP18Q8IXM2 172 aa11.43□□□□□ -0.58
DDB1-218ENST00000540784 KIR2DL5AQ8N109 375 aa11.43□□□□□ -0.58
DDB1-218ENST00000540784 ZNF738Q8NE65 137 aa11.43□□□□□ -0.58
DDB1-218ENST00000540784 KIR2DL5BQ8NHK3 375 aa11.43□□□□□ -0.58
DDB1-218ENST00000540784 RAB24Q969Q5 203 aa11.43□□□□□ -0.58
DDB1-218ENST00000540784 FXYD5Q96DB9 178 aa11.43□□□□□ -0.58
DDB1-218ENST00000540784 CSTL1Q9H114 145 aa11.43□□□□□ -0.58
DDB1-218ENST00000540784 SAV1Q9H4B6 383 aaPredicted RBP11.43□□□□□ -0.58
DDB1-218ENST00000540784 H3BMM0 161 aa11.42□□□□□ -0.58
DDB1-218ENST00000540784 UBE2CO00762 179 aa11.42□□□□□ -0.58
DDB1-218ENST00000540784 HMGB3O15347 200 aaKnown RBP11.42□□□□□ -0.58
DDB1-218ENST00000540784 ZNF253O75346 499 aa11.42□□□□□ -0.58
DDB1-218ENST00000540784 OR10J4P0C629 311 aa11.42□□□□□ -0.58
DDB1-218ENST00000540784 SEC11BP0C7V7 166 aa11.42□□□□□ -0.58
DDB1-218ENST00000540784 TPT1P13693 172 aaKnown RBP11.42□□□□□ -0.58
DDB1-218ENST00000540784 HLA-DMBP28068 263 aa11.42□□□□□ -0.58
DDB1-218ENST00000540784 DEFB1P60022 68 aa11.42□□□□□ -0.58
DDB1-218ENST00000540784 PQLC2Q6ZP29 291 aa11.42□□□□□ -0.58
DDB1-218ENST00000540784 TRPT1Q86TN4 253 aaKnown RBP11.42□□□□□ -0.58
DDB1-218ENST00000540784 ZMAT4Q9H898 229 aa11.42□□□□□ -0.58
DDB1-218ENST00000540784 F6UB75 175 aa11.41□□□□□ -0.58
DDB1-218ENST00000540784 SLC17A3O00476 420 aa11.41□□□□□ -0.58
DDB1-218ENST00000540784 NDUFB4O95168 129 aa11.41□□□□□ -0.58
DDB1-218ENST00000540784 HLA-DRB4P13762 266 aa11.41□□□□□ -0.58
DDB1-218ENST00000540784 PDE6HQ13956 83 aa11.41□□□□□ -0.58
DDB1-218ENST00000540784 GDF5OSQ5U4N7 250 aa11.41□□□□□ -0.58
DDB1-218ENST00000540784 ZNF503Q96F45 646 aa11.41□□□□□ -0.58
DDB1-218ENST00000540784 HLA-DRB4X5D2U9 266 aa11.41□□□□□ -0.58
DDB1-218ENST00000540784 PRKDCP78527 4128 aaKnown RBP11.4□□□□□ -0.58
DDB1-218ENST00000540784 A0A0J9YX75 114 aa11.4□□□□□ -0.58
DDB1-218ENST00000540784 IGKV3-20P01619 116 aa11.4□□□□□ -0.58
DDB1-218ENST00000540784 STAG3L2P0CL84 134 aa11.4□□□□□ -0.58
DDB1-218ENST00000540784 STAG3L3P0CL85 134 aa11.4□□□□□ -0.58
DDB1-218ENST00000540784 UBE2L3P68036 154 aaKnown RBP11.4□□□□□ -0.58
DDB1-218ENST00000540784 EIF5AL1Q6IS14 154 aaKnown RBP11.4□□□□□ -0.58
DDB1-218ENST00000540784 MORN3Q6PF18 240 aaPredicted RBP11.4□□□□□ -0.58
DDB1-218ENST00000540784 SLC51BQ86UW2 128 aa11.4□□□□□ -0.58
DDB1-218ENST00000540784 C9orf62Q8N4C0 152 aa11.4□□□□□ -0.58
DDB1-218ENST00000540784 OR4B1Q8NGF8 309 aa11.4□□□□□ -0.58
DDB1-218ENST00000540784 STOML3Q8TAV4 291 aa11.4□□□□□ -0.58
DDB1-218ENST00000540784 RPUSD4Q96CM3 377 aaKnown RBP11.4□□□□□ -0.58
DDB1-218ENST00000540784 SPATA25Q9BR10 227 aa11.4□□□□□ -0.58
DDB1-218ENST00000540784 TM2D3Q9BRN9 247 aa11.4□□□□□ -0.58
DDB1-218ENST00000540784 AAMDCQ9H7C9 122 aa11.4□□□□□ -0.58
DDB1-218ENST00000540784 PRELID1Q9Y255 219 aa11.4□□□□□ -0.58
DDB1-218ENST00000540784 ZNF705FA8MVS1 300 aaPredicted RBP11.39□□□□□ -0.59
DDB1-218ENST00000540784 UMAD1C9J7I0 102 aa11.39□□□□□ -0.59
DDB1-218ENST00000540784 DUSP14O95147 198 aaKnown RBP11.39□□□□□ -0.59
DDB1-218ENST00000540784 CXorf1O96002 111 aa11.39□□□□□ -0.59
DDB1-218ENST00000540784 NUTF2P61970 127 aaKnown RBP11.39□□□□□ -0.59
DDB1-218ENST00000540784 RANP62826 216 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms