RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 TIMM23O14925 209 aa8.08□□□□□ -1.12
TRAF1-202ENST00000540010 Q6ZWC4 215 aa8.08□□□□□ -1.12
TRAF1-202ENST00000540010 GRNP28799 593 aaKnown RBP8.07□□□□□ -1.12
TRAF1-202ENST00000540010 Q8TCH9 128 aa8.07□□□□□ -1.12
TRAF1-202ENST00000540010 NACAE9PAV3 2078 aa8.07□□□□□ -1.12
TRAF1-202ENST00000540010 TCRAP04437 139 aa8.07□□□□□ -1.12
TRAF1-202ENST00000540010 PRSS8Q16651 343 aa8.07□□□□□ -1.12
TRAF1-202ENST00000540010 TMEM200BQ69YZ2 307 aa8.07□□□□□ -1.12
TRAF1-202ENST00000540010 FAM71F2Q6NXP2 309 aa8.07□□□□□ -1.12
TRAF1-202ENST00000540010 IGFL4Q6B9Z1 124 aa8.07□□□□□ -1.12
TRAF1-202ENST00000540010 GLMPQ8WWB7 406 aa8.07□□□□□ -1.12
TRAF1-202ENST00000540010 ARPC1AQ92747 370 aa8.07□□□□□ -1.12
TRAF1-202ENST00000540010 MRPL16Q9NX20 251 aaKnown RBP8.07□□□□□ -1.12
TRAF1-202ENST00000540010 LINC00527Q9UJ94 153 aa8.07□□□□□ -1.12
TRAF1-202ENST00000540010 TMEM178BH3BS89 294 aa8.07□□□□□ -1.12
TRAF1-202ENST00000540010 IGHV3-11P01762 117 aa8.07□□□□□ -1.12
TRAF1-202ENST00000540010 OR2K2Q8NGT1 345 aa8.07□□□□□ -1.12
TRAF1-202ENST00000540010 C8orf46Q8TAG6 207 aa8.07□□□□□ -1.12
TRAF1-202ENST00000540010 IFI27L1Q96BM0 104 aa8.07□□□□□ -1.12
TRAF1-202ENST00000540010 FABP5P3A8MUU1 101 aa8.06□□□□□ -1.12
TRAF1-202ENST00000540010 SHISA9B4DS77 424 aa8.06□□□□□ -1.12
TRAF1-202ENST00000540010 HBDP02042 147 aa8.06□□□□□ -1.12
TRAF1-202ENST00000540010 RNASE2P10153 161 aaKnown RBP8.06□□□□□ -1.12
TRAF1-202ENST00000540010 SCGB3A1Q96QR1 104 aa8.06□□□□□ -1.12
TRAF1-202ENST00000540010 IGHV3OR16-12A0A075B7B8 117 aa8.06□□□□□ -1.12
TRAF1-202ENST00000540010 D6R8Y8 96 aa8.06□□□□□ -1.12
TRAF1-202ENST00000540010 ATMQ13315 3056 aa8.06□□□□□ -1.12
TRAF1-202ENST00000540010 IGKV2-40A0A087WW87 121 aaPredicted RBP8.06□□□□□ -1.12
TRAF1-202ENST00000540010 F2Z2F3 143 aa8.06□□□□□ -1.12
TRAF1-202ENST00000540010 NBR2O15453 112 aa8.06□□□□□ -1.12
TRAF1-202ENST00000540010 CRXO43186 299 aaPredicted RBP8.06□□□□□ -1.12
TRAF1-202ENST00000540010 IGKV2D-40P01614 121 aaPredicted RBP8.06□□□□□ -1.12
TRAF1-202ENST00000540010 TRGV3P03979 118 aa8.06□□□□□ -1.12
TRAF1-202ENST00000540010 Q8TAT8 98 aa8.06□□□□□ -1.12
TRAF1-202ENST00000540010 C5orf30Q96GV9 206 aa8.06□□□□□ -1.12
TRAF1-202ENST00000540010 ST20Q9HBF5 79 aa8.06□□□□□ -1.12
TRAF1-202ENST00000540010 ATP5G2Q06055 141 aa8.05□□□□□ -1.12
TRAF1-202ENST00000540010 Q6AWC8 147 aa8.05□□□□□ -1.12
TRAF1-202ENST00000540010 C18orf32Q8TCD1 76 aa8.05□□□□□ -1.12
TRAF1-202ENST00000540010 KIR2DL4Q99706 377 aa8.05□□□□□ -1.12
TRAF1-202ENST00000540010 SYS1-DBNDD2H3BUS1 97 aa8.05□□□□□ -1.12
TRAF1-202ENST00000540010 WNT2P09544 360 aa8.05□□□□□ -1.12
TRAF1-202ENST00000540010 ID1P41134 155 aa8.05□□□□□ -1.12
TRAF1-202ENST00000540010 RPL15P61313 204 aaKnown RBP8.05□□□□□ -1.12
TRAF1-202ENST00000540010 ZNF56Q15929 161 aa8.05□□□□□ -1.12
TRAF1-202ENST00000540010 C17orf58Q2M2W7 97 aa8.05□□□□□ -1.12
TRAF1-202ENST00000540010 FAM159AQ6UWV7 190 aa8.05□□□□□ -1.12
TRAF1-202ENST00000540010 SLC25A39Q9BZJ4 359 aaPredicted RBP8.05□□□□□ -1.12
TRAF1-202ENST00000540010 LY6HO94772 140 aa8.05□□□□□ -1.12
TRAF1-202ENST00000540010 PLA2G5P39877 138 aa8.05□□□□□ -1.12
TRAF1-202ENST00000540010 ZNF134P52741 427 aa8.05□□□□□ -1.12
TRAF1-202ENST00000540010 TEX36Q5VZQ5 186 aa8.05□□□□□ -1.12
TRAF1-202ENST00000540010 EBLN2Q6P2I7 272 aa8.05□□□□□ -1.12
TRAF1-202ENST00000540010 OR5AN1Q8NGI8 311 aa8.05□□□□□ -1.12
TRAF1-202ENST00000540010 JMJD8Q96S16 334 aa8.05□□□□□ -1.12
TRAF1-202ENST00000540010 GGTLC3B5MD39 225 aa8.05□□□□□ -1.12
TRAF1-202ENST00000540010 ATP5LO75964 103 aa8.05□□□□□ -1.12
TRAF1-202ENST00000540010 SLAQ13239 276 aa8.05□□□□□ -1.12
TRAF1-202ENST00000540010 ORAOV1Q8WV07 137 aa8.05□□□□□ -1.12
TRAF1-202ENST00000540010 H0YJW9 148 aa8.04□□□□□ -1.12
TRAF1-202ENST00000540010 LGALS3P17931 250 aaKnown RBP8.04□□□□□ -1.12
TRAF1-202ENST00000540010 LYZL1Q6UWQ5 148 aa8.04□□□□□ -1.12
TRAF1-202ENST00000540010 LYPD2Q6UXB3 125 aa8.04□□□□□ -1.12
TRAF1-202ENST00000540010 ATP5L2Q7Z4Y8 100 aa8.04□□□□□ -1.12
TRAF1-202ENST00000540010 CHCHD1Q96BP2 118 aaKnown RBP8.04□□□□□ -1.12
TRAF1-202ENST00000540010 C20orf144Q9BQM9 153 aa8.04□□□□□ -1.12
TRAF1-202ENST00000540010 SMKR1H3BMG3 65 aa8.04□□□□□ -1.12
TRAF1-202ENST00000540010 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.04□□□□□ -1.12
TRAF1-202ENST00000540010 Q6ZVH6 145 aa8.04□□□□□ -1.12
TRAF1-202ENST00000540010 CHODLQ9H9P2 273 aa8.04□□□□□ -1.12
TRAF1-202ENST00000540010 LY96Q9Y6Y9 160 aa8.04□□□□□ -1.12
TRAF1-202ENST00000540010 RAB9AP51151 201 aa8.04□□□□□ -1.12
TRAF1-202ENST00000540010 Q0VG73 95 aa8.04□□□□□ -1.12
TRAF1-202ENST00000540010 UBE2V1Q13404 147 aa8.04□□□□□ -1.12
TRAF1-202ENST00000540010 TMEM167AQ8TBQ9 72 aa8.04□□□□□ -1.12
TRAF1-202ENST00000540010 WFDC12Q8WWY7 111 aa8.04□□□□□ -1.12
TRAF1-202ENST00000540010 EEF1AKMT3Q96AZ1 226 aa8.04□□□□□ -1.12
TRAF1-202ENST00000540010 NUPR1O60356 82 aa8.03□□□□□ -1.12
TRAF1-202ENST00000540010 IGHV1-8P0DP01 117 aa8.03□□□□□ -1.12
TRAF1-202ENST00000540010 VDAC2P45880 294 aaPredicted RBP8.03□□□□□ -1.12
TRAF1-202ENST00000540010 ZNF256Q9Y2P7 627 aaPredicted RBP8.03□□□□□ -1.12
TRAF1-202ENST00000540010 MMP23AO75900 390 aa8.03□□□□□ -1.12
TRAF1-202ENST00000540010 ADORA2A-AS1P86434 159 aa8.03□□□□□ -1.12
TRAF1-202ENST00000540010 TDRG1Q3Y452 100 aa8.03□□□□□ -1.12
TRAF1-202ENST00000540010 Q5PR19 223 aa8.03□□□□□ -1.12
TRAF1-202ENST00000540010 SLC25A48Q6ZT89 311 aaKnown RBP8.03□□□□□ -1.12
TRAF1-202ENST00000540010 GTSCR1Q86UQ5 136 aa8.03□□□□□ -1.12
TRAF1-202ENST00000540010 AMN1Q8IY45 258 aa8.03□□□□□ -1.12
TRAF1-202ENST00000540010 STPG4Q8N801 248 aa8.03□□□□□ -1.12
TRAF1-202ENST00000540010 RCHY1Q96PM5 261 aa8.03□□□□□ -1.12
TRAF1-202ENST00000540010 IGLC2P0DOY2 106 aa8.03□□□□□ -1.12
TRAF1-202ENST00000540010 IGLC3P0DOY3 106 aa8.03□□□□□ -1.12
TRAF1-202ENST00000540010 PDLIM4P50479 330 aa8.03□□□□□ -1.12
TRAF1-202ENST00000540010 NCOR1P1Q9H4R4 102 aa8.03□□□□□ -1.12
TRAF1-202ENST00000540010 IGHV2-26A0A0B4J1V2 119 aa8.02□□□□□ -1.12
TRAF1-202ENST00000540010 A0A1B0GW15 77 aa8.02□□□□□ -1.12
TRAF1-202ENST00000540010 A0A1W2PPI3 338 aa8.02□□□□□ -1.12
TRAF1-202ENST00000540010 ARMS2P0C7Q2 107 aa8.02□□□□□ -1.12
TRAF1-202ENST00000540010 YPEL3P61236 119 aaPredicted RBP8.02□□□□□ -1.12
TRAF1-202ENST00000540010 C11orf1Q9H5F2 150 aa8.02□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms