RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 M0QZ24 198 aa12.27□□□□□ -0.45
TRAF3-204ENST00000539721 CBLN1P23435 193 aa12.27□□□□□ -0.45
TRAF3-204ENST00000539721 CD81P60033 236 aa12.27□□□□□ -0.45
TRAF3-204ENST00000539721 GGTLC3B5MD39 225 aa12.26□□□□□ -0.45
TRAF3-204ENST00000539721 SRP19P09132 144 aaKnown RBP12.26□□□□□ -0.45
TRAF3-204ENST00000539721 FOLR2P14207 255 aa12.26□□□□□ -0.45
TRAF3-204ENST00000539721 SUMO1P63165 101 aaKnown RBP12.26□□□□□ -0.45
TRAF3-204ENST00000539721 NKX6-2Q9C056 277 aaPredicted RBP12.26□□□□□ -0.45
TRAF3-204ENST00000539721 SELENOKQ9Y6D0 94 aa12.26□□□□□ -0.45
TRAF3-204ENST00000539721 HELTA6NFD8 242 aa12.25□□□□□ -0.45
TRAF3-204ENST00000539721 SLC17A3O00476 420 aa12.25□□□□□ -0.45
TRAF3-204ENST00000539721 OVOL1O14753 267 aa12.25□□□□□ -0.45
TRAF3-204ENST00000539721 NDUFB4O95168 129 aa12.25□□□□□ -0.45
TRAF3-204ENST00000539721 PDE6HQ13956 83 aa12.25□□□□□ -0.45
TRAF3-204ENST00000539721 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.25□□□□□ -0.45
TRAF3-204ENST00000539721 SLC35B3Q9H1N7 401 aa12.25□□□□□ -0.45
TRAF3-204ENST00000539721 Q9H3A6 140 aa12.25□□□□□ -0.45
TRAF3-204ENST00000539721 PDE6DO43924 150 aa12.25□□□□□ -0.45
TRAF3-204ENST00000539721 PF4P02776 101 aa12.25□□□□□ -0.45
TRAF3-204ENST00000539721 SFTA3P0C7M3 94 aa12.25□□□□□ -0.45
TRAF3-204ENST00000539721 CEBPGP53567 150 aa12.25□□□□□ -0.45
TRAF3-204ENST00000539721 RPL11P62913 178 aaKnown RBP12.25□□□□□ -0.45
TRAF3-204ENST00000539721 TCF24Q7RTU0 167 aa12.25□□□□□ -0.45
TRAF3-204ENST00000539721 TMEM218A2RU14 115 aa12.24□□□□□ -0.45
TRAF3-204ENST00000539721 PGPA6NDG6 321 aa12.24□□□□□ -0.45
TRAF3-204ENST00000539721 F6UZH7 168 aa12.24□□□□□ -0.45
TRAF3-204ENST00000539721 MEOX2P50222 304 aa12.24□□□□□ -0.45
TRAF3-204ENST00000539721 PSG9Q00887 426 aa12.24□□□□□ -0.45
TRAF3-204ENST00000539721 ADAMTSL5Q6ZMM2 481 aa12.24□□□□□ -0.45
TRAF3-204ENST00000539721 EXOC3-AS1Q8N2X6 119 aa12.24□□□□□ -0.45
TRAF3-204ENST00000539721 CYB561D1Q8N8Q1 229 aa12.24□□□□□ -0.45
TRAF3-204ENST00000539721 OTORQ9NRC9 128 aa12.24□□□□□ -0.45
TRAF3-204ENST00000539721 ZNF253O75346 499 aa12.23□□□□□ -0.45
TRAF3-204ENST00000539721 CSN3P07498 182 aa12.23□□□□□ -0.45
TRAF3-204ENST00000539721 CCDC28AQ8IWP9 274 aa12.23□□□□□ -0.45
TRAF3-204ENST00000539721 LYPD1Q8N2G4 141 aa12.23□□□□□ -0.45
TRAF3-204ENST00000539721 TMEM158Q8WZ71 300 aa12.23□□□□□ -0.45
TRAF3-204ENST00000539721 AAMDCQ9H7C9 122 aa12.23□□□□□ -0.45
TRAF3-204ENST00000539721 MLXQ9UH92 298 aa12.23□□□□□ -0.45
TRAF3-204ENST00000539721 IGKV3-7A0A075B6H7 116 aa12.23□□□□□ -0.45
TRAF3-204ENST00000539721 TMEM250H0YL14 139 aa12.23□□□□□ -0.45
TRAF3-204ENST00000539721 NDUFS6O75380 124 aaKnown RBP12.23□□□□□ -0.45
TRAF3-204ENST00000539721 SLC25A5P05141 298 aaKnown RBP12.23□□□□□ -0.45
TRAF3-204ENST00000539721 DYNLRB2Q8TF09 96 aa12.23□□□□□ -0.45
TRAF3-204ENST00000539721 SCO2A0A1W2PP80 73 aa12.22□□□□□ -0.45
TRAF3-204ENST00000539721 LINC00052Q96N35 136 aa12.22□□□□□ -0.45
TRAF3-204ENST00000539721 SLC50A1Q9BRV3 221 aa12.22□□□□□ -0.45
TRAF3-204ENST00000539721 NRN1Q9NPD7 142 aa12.22□□□□□ -0.45
TRAF3-204ENST00000539721 ZNF331Q9NQX6 463 aaPredicted RBP12.22□□□□□ -0.45
TRAF3-204ENST00000539721 WNK1Q9H4A3 2382 aa12.21□□□□□ -0.45
TRAF3-204ENST00000539721 KRBOX1C9JBD0 128 aa12.21□□□□□ -0.45
TRAF3-204ENST00000539721 F8W036 122 aa12.21□□□□□ -0.45
TRAF3-204ENST00000539721 ATRQ13535 2644 aa12.21□□□□□ -0.45
TRAF3-204ENST00000539721 FAM90A2PQ658T7 463 aa12.21□□□□□ -0.45
TRAF3-204ENST00000539721 C12orf54Q6X4T0 127 aa12.21□□□□□ -0.45
TRAF3-204ENST00000539721 C5orf17Q8NAS9 161 aa12.21□□□□□ -0.45
TRAF3-204ENST00000539721 CMTM2Q8TAZ6 248 aa12.21□□□□□ -0.45
TRAF3-204ENST00000539721 ZNF747Q9BV97 191 aa12.21□□□□□ -0.45
TRAF3-204ENST00000539721 RPH3ALQ9UNE2 315 aa12.21□□□□□ -0.45
TRAF3-204ENST00000539721 GNG5P63218 68 aa12.2□□□□□ -0.46
TRAF3-204ENST00000539721 SOHLH1Q5JUK2 328 aa12.2□□□□□ -0.46
TRAF3-204ENST00000539721 IGFL4Q6B9Z1 124 aa12.2□□□□□ -0.46
TRAF3-204ENST00000539721 C3orf56Q8N813 242 aa12.2□□□□□ -0.46
TRAF3-204ENST00000539721 RPUSD4Q96CM3 377 aaKnown RBP12.2□□□□□ -0.46
TRAF3-204ENST00000539721 C16orf92Q96LL3 132 aa12.2□□□□□ -0.46
TRAF3-204ENST00000539721 TCEAL7Q9BRU2 100 aa12.2□□□□□ -0.46
TRAF3-204ENST00000539721 ADCYAP1P18509 176 aa12.2□□□□□ -0.46
TRAF3-204ENST00000539721 GBGT1Q8N5D6 347 aa12.2□□□□□ -0.46
TRAF3-204ENST00000539721 C11orf52Q96A22 123 aa12.2□□□□□ -0.46
TRAF3-204ENST00000539721 EPDR1Q9UM22 224 aa12.2□□□□□ -0.46
TRAF3-204ENST00000539721 TENM1Q9UKZ4 2725 aa12.19□□□□□ -0.46
TRAF3-204ENST00000539721 PEX7O00628 323 aa12.19□□□□□ -0.46
TRAF3-204ENST00000539721 HLA-DMBP28068 263 aa12.19□□□□□ -0.46
TRAF3-204ENST00000539721 ZNF674Q2M3X9 581 aa12.19□□□□□ -0.46
TRAF3-204ENST00000539721 LINC00482Q8N8I6 264 aa12.19□□□□□ -0.46
TRAF3-204ENST00000539721 PARLQ9H300 379 aa12.19□□□□□ -0.46
TRAF3-204ENST00000539721 TRAV8-2A0A0B4J237 113 aa12.18□□□□□ -0.46
TRAF3-204ENST00000539721 M0R3E3 92 aa12.18□□□□□ -0.46
TRAF3-204ENST00000539721 S100A1P23297 94 aa12.18□□□□□ -0.46
TRAF3-204ENST00000539721 WFDC3Q8IUB2 231 aa12.18□□□□□ -0.46
TRAF3-204ENST00000539721 RNF182Q8N6D2 247 aa12.18□□□□□ -0.46
TRAF3-204ENST00000539721 HIST1H2BAQ96A08 127 aa12.18□□□□□ -0.46
TRAF3-204ENST00000539721 SEC11CQ9BY50 192 aa12.18□□□□□ -0.46
TRAF3-204ENST00000539721 MS4A6AQ9H2W1 248 aa12.18□□□□□ -0.46
TRAF3-204ENST00000539721 SIGLEC8Q9NYZ4 499 aa12.18□□□□□ -0.46
TRAF3-204ENST00000539721 DNASE2O00115 360 aaPredicted RBP12.18□□□□□ -0.46
TRAF3-204ENST00000539721 SOCS3O14543 225 aa12.18□□□□□ -0.46
TRAF3-204ENST00000539721 SAP30O75446 220 aa12.18□□□□□ -0.46
TRAF3-204ENST00000539721 AKR1C3P42330 323 aa12.18□□□□□ -0.46
TRAF3-204ENST00000539721 CSN1S1P47710 185 aa12.18□□□□□ -0.46
TRAF3-204ENST00000539721 TFPI2P48307 235 aa12.18□□□□□ -0.46
TRAF3-204ENST00000539721 RBPMS2Q6ZRY4 209 aaKnown RBP12.18□□□□□ -0.46
TRAF3-204ENST00000539721 ATG101Q9BSB4 218 aa12.18□□□□□ -0.46
TRAF3-204ENST00000539721 DERL1Q9BUN8 251 aa12.18□□□□□ -0.46
TRAF3-204ENST00000539721 PRELID1Q9Y255 219 aa12.18□□□□□ -0.46
TRAF3-204ENST00000539721 TCRAP04437 139 aa12.17□□□□□ -0.46
TRAF3-204ENST00000539721 PAFAH1B2P68402 229 aa12.17□□□□□ -0.46
TRAF3-204ENST00000539721 DEFB114Q30KQ6 69 aa12.17□□□□□ -0.46
TRAF3-204ENST00000539721 SAMD13Q5VXD3 122 aa12.17□□□□□ -0.46
TRAF3-204ENST00000539721 C2CD4CQ8TF44 421 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms