RNA–Protein interactions for RNA: ENST00000539232.1

LMO3-220, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 580 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-220ENST00000539232 CNN1P51911 297 aaKnown RBP5.47□□□□□ -1.53
LMO3-220ENST00000539232 CEBPGP53567 150 aa5.47□□□□□ -1.53
LMO3-220ENST00000539232 PTTG1IPP53801 180 aa5.47□□□□□ -1.53
LMO3-220ENST00000539232 PIGPP57054 158 aa5.47□□□□□ -1.53
LMO3-220ENST00000539232 FAM90A2PQ658T7 463 aa5.47□□□□□ -1.53
LMO3-220ENST00000539232 TOMM20LQ6UXN7 152 aa5.47□□□□□ -1.53
LMO3-220ENST00000539232 ZNF705AQ6ZN79 300 aaPredicted RBP5.47□□□□□ -1.53
LMO3-220ENST00000539232 CYP2G1PQ6ZSU1 146 aa5.47□□□□□ -1.53
LMO3-220ENST00000539232 SBSPONQ8IVN8 264 aa5.47□□□□□ -1.53
LMO3-220ENST00000539232 FAM223AQ8IWN6 122 aa5.47□□□□□ -1.53
LMO3-220ENST00000539232 CYB561D1Q8N8Q1 229 aa5.47□□□□□ -1.53
LMO3-220ENST00000539232 NUDT10Q8NFP7 164 aa5.47□□□□□ -1.53
LMO3-220ENST00000539232 OR2G3Q8NGZ4 309 aa5.47□□□□□ -1.53
LMO3-220ENST00000539232 OR5B3Q8NH48 314 aa5.47□□□□□ -1.53
LMO3-220ENST00000539232 OR4A5Q8NH83 315 aa5.47□□□□□ -1.53
LMO3-220ENST00000539232 VSTM2AQ8TAG5 236 aa5.47□□□□□ -1.53
LMO3-220ENST00000539232 MBD3L1Q8WWY6 194 aa5.47□□□□□ -1.53
LMO3-220ENST00000539232 CHRDL1Q9BU40 450 aa5.47□□□□□ -1.53
LMO3-220ENST00000539232 QTRT1Q9BXR0 403 aaKnown RBP5.47□□□□□ -1.53
LMO3-220ENST00000539232 SLC45A2Q9UMX9 530 aa5.47□□□□□ -1.53
LMO3-220ENST00000539232 ZNF257Q9Y2Q1 563 aa5.47□□□□□ -1.53
LMO3-220ENST00000539232 OR51B2Q9Y5P1 312 aa5.47□□□□□ -1.53
LMO3-220ENST00000539232 URGCP-MRPS24S4R325 110 aa5.47□□□□□ -1.53
LMO3-220ENST00000539232 MUC4Q99102 2169 aa5.46□□□□□ -1.53
LMO3-220ENST00000539232 DNAH7Q8WXX0 4024 aa5.46□□□□□ -1.54
LMO3-220ENST00000539232 TRAV30A0A087WSZ9 112 aa5.46□□□□□ -1.54
LMO3-220ENST00000539232 ZNF785A8K8V0 405 aa5.46□□□□□ -1.54
LMO3-220ENST00000539232 TMEM250H0YL14 139 aa5.46□□□□□ -1.54
LMO3-220ENST00000539232 K7EIM0 57 aa5.46□□□□□ -1.54
LMO3-220ENST00000539232 CLEC3BP05452 202 aa5.46□□□□□ -1.54
LMO3-220ENST00000539232 SERPINE2P07093 398 aa5.46□□□□□ -1.54
LMO3-220ENST00000539232 BCL2P10415 239 aa5.46□□□□□ -1.54
LMO3-220ENST00000539232 BMI1P35226 326 aa5.46□□□□□ -1.54
LMO3-220ENST00000539232 RPEL1Q2QD12 228 aa5.46□□□□□ -1.54
LMO3-220ENST00000539232 TM4SF20Q53R12 229 aa5.46□□□□□ -1.54
LMO3-220ENST00000539232 TMEM182Q6ZP80 229 aaPredicted RBP5.46□□□□□ -1.54
LMO3-220ENST00000539232 CMTM1Q8IZ96 169 aa5.46□□□□□ -1.54
LMO3-220ENST00000539232 LGI3Q8N145 548 aa5.46□□□□□ -1.54
LMO3-220ENST00000539232 ZNF738Q8NE65 137 aa5.46□□□□□ -1.54
LMO3-220ENST00000539232 OR51G1Q8NGK1 321 aa5.46□□□□□ -1.54
LMO3-220ENST00000539232 OR4D5Q8NGN0 318 aa5.46□□□□□ -1.54
LMO3-220ENST00000539232 OR1L8Q8NGR8 309 aa5.46□□□□□ -1.54
LMO3-220ENST00000539232 ZNF502Q8TBZ5 544 aa5.46□□□□□ -1.54
LMO3-220ENST00000539232 GATAD1Q8WUU5 269 aa5.46□□□□□ -1.54
LMO3-220ENST00000539232 OR4C12Q96R67 309 aa5.46□□□□□ -1.54
LMO3-220ENST00000539232 RARRES2Q99969 163 aa5.46□□□□□ -1.54
LMO3-220ENST00000539232 PARD6GQ9BYG4 376 aaPredicted RBP5.46□□□□□ -1.54
LMO3-220ENST00000539232 COMMD5Q9GZQ3 224 aa5.46□□□□□ -1.54
LMO3-220ENST00000539232 WFDC10AQ9H1F0 79 aa5.46□□□□□ -1.54
LMO3-220ENST00000539232 TMEM14BQ9NUH8 114 aa5.46□□□□□ -1.54
LMO3-220ENST00000539232 MRPL36Q9P0J6 103 aaKnown RBP5.46□□□□□ -1.54
LMO3-220ENST00000539232 LSM5Q9Y4Y9 91 aaKnown RBP5.46□□□□□ -1.54
LMO3-220ENST00000539232 C3orf85A0A1B0GTC6 90 aa5.45□□□□□ -1.54
LMO3-220ENST00000539232 TMEM213A2RRL7 107 aa5.45□□□□□ -1.54
LMO3-220ENST00000539232 OR2T8A6NH00 312 aa5.45□□□□□ -1.54
LMO3-220ENST00000539232 C2orf70A6NJV1 201 aa5.45□□□□□ -1.54
LMO3-220ENST00000539232 C15orf61A6NNL5 157 aa5.45□□□□□ -1.54
LMO3-220ENST00000539232 H0Y980 276 aa5.45□□□□□ -1.54
LMO3-220ENST00000539232 H7BYZ3 331 aa5.45□□□□□ -1.54
LMO3-220ENST00000539232 FRMD6-AS1P0C7T7 363 aa5.45□□□□□ -1.54
LMO3-220ENST00000539232 ATP6V0CP27449 155 aa5.45□□□□□ -1.54
LMO3-220ENST00000539232 GPR183P32249 361 aa5.45□□□□□ -1.54
LMO3-220ENST00000539232 ADMP35318 185 aa5.45□□□□□ -1.54
LMO3-220ENST00000539232 ARL3P36405 182 aa5.45□□□□□ -1.54
LMO3-220ENST00000539232 INSL3P51460 131 aa5.45□□□□□ -1.54
LMO3-220ENST00000539232 TAS2R30P59541 319 aa5.45□□□□□ -1.54
LMO3-220ENST00000539232 ERVK-16P61578 105 aa5.45□□□□□ -1.54
LMO3-220ENST00000539232 RAB11AP62491 216 aa5.45□□□□□ -1.54
LMO3-220ENST00000539232 SERF2P84101 59 aa5.45□□□□□ -1.54
LMO3-220ENST00000539232 EWSR1Q01844 656 aaKnown RBP eCLIP5.45□□□□□ -1.54
LMO3-220ENST00000539232 MLANAQ16655 118 aa5.45□□□□□ -1.54
LMO3-220ENST00000539232 DEFB114Q30KQ6 69 aa5.45□□□□□ -1.54
LMO3-220ENST00000539232 CD300EQ496F6 205 aaPredicted RBP5.45□□□□□ -1.54
LMO3-220ENST00000539232 SLC25A24Q6NUK1 477 aa5.45□□□□□ -1.54
LMO3-220ENST00000539232 OR2C3Q8N628 320 aa5.45□□□□□ -1.54
LMO3-220ENST00000539232 CCDC71LQ8N9Z2 235 aa5.45□□□□□ -1.54
LMO3-220ENST00000539232 PINX1Q96BK5 328 aaKnown RBP5.45□□□□□ -1.54
LMO3-220ENST00000539232 ALKBH7Q9BT30 221 aaPredicted RBP5.45□□□□□ -1.54
LMO3-220ENST00000539232 PSMG3Q9BT73 122 aaPredicted RBP5.45□□□□□ -1.54
LMO3-220ENST00000539232 VAMP8Q9BV40 100 aa5.45□□□□□ -1.54
LMO3-220ENST00000539232 NAA60Q9H7X0 242 aa5.45□□□□□ -1.54
LMO3-220ENST00000539232 WFDC1Q9HC57 220 aa5.45□□□□□ -1.54
LMO3-220ENST00000539232 UQCR10Q9UDW1 63 aa5.45□□□□□ -1.54
LMO3-220ENST00000539232 FUT9Q9Y231 359 aa5.45□□□□□ -1.54
LMO3-220ENST00000539232 MRPS16Q9Y3D3 137 aaKnown RBP5.45□□□□□ -1.54
LMO3-220ENST00000539232 ZNF320A2RRD8 509 aa5.44□□□□□ -1.54
LMO3-220ENST00000539232 ZNF705FA8MVS1 300 aaPredicted RBP5.44□□□□□ -1.54
LMO3-220ENST00000539232 I3L2K1 104 aa5.44□□□□□ -1.54
LMO3-220ENST00000539232 K7ERU9 68 aa5.44□□□□□ -1.54
LMO3-220ENST00000539232 ZNF207O43670 478 aaKnown RBP5.44□□□□□ -1.54
LMO3-220ENST00000539232 NXPH3O95157 252 aa5.44□□□□□ -1.54
LMO3-220ENST00000539232 CD7P09564 240 aa5.44□□□□□ -1.54
LMO3-220ENST00000539232 ZNF705DP0CH99 300 aaPredicted RBP5.44□□□□□ -1.54
LMO3-220ENST00000539232 ZNF705BP0CI00 300 aaPredicted RBP5.44□□□□□ -1.54
LMO3-220ENST00000539232 IGHV4-30-4P0DP06 118 aa5.44□□□□□ -1.54
LMO3-220ENST00000539232 DEFA4P12838 97 aa5.44□□□□□ -1.54
LMO3-220ENST00000539232 GALR1P47211 349 aa5.44□□□□□ -1.54
LMO3-220ENST00000539232 RPL19P84098 196 aaKnown RBP5.44□□□□□ -1.54
LMO3-220ENST00000539232 TMEM187Q14656 261 aa5.44□□□□□ -1.54
LMO3-220ENST00000539232 COX19Q49B96 90 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms